Strain Fitness in Erwinia amylovora T8 around OLJFJH_11415

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7
2,379,882	+				+0.2
2,379,953	+				+1.3
2,379,954	-				+0.6
2,379,977	-				+0.8
2,379,990	+				+0.9
2,380,165	-				-1.9
2,380,181	+				-0.2
2,380,309	+				-3.5
2,380,309	+				+2.1
2,380,310	-				-0.7
2,380,375	-		OLJFJH_11410	0.15	-2.0
2,380,439	-		OLJFJH_11410	0.29	-1.2
2,380,439	-		OLJFJH_11410	0.29	+0.4
2,380,444	+		OLJFJH_11410	0.31	+0.9
2,380,444	+		OLJFJH_11410	0.31	-0.8
2,380,445	-		OLJFJH_11410	0.31	-1.1
2,380,445	-		OLJFJH_11410	0.31	+1.2
2,380,508	+		OLJFJH_11410	0.45	-0.3
2,380,508	+		OLJFJH_11410	0.45	-1.5
2,380,508	+		OLJFJH_11410	0.45	-0.6
2,380,553	+		OLJFJH_11410	0.55	+0.1
2,380,554	-		OLJFJH_11410	0.56	-0.8
2,380,559	+		OLJFJH_11410	0.57	-0.7
2,380,650	-		OLJFJH_11410	0.78	-1.3
2,380,714	+				+0.6
2,380,714	+				-1.1
2,380,714	+				-1.2
2,380,772	-				+0.7
2,380,772	-				+0.7
2,380,788	-				-2.9
2,380,876	+		OLJFJH_11415	0.16	-0.9
2,380,878	+		OLJFJH_11415	0.17	-0.8
2,380,890	-		OLJFJH_11415	0.19	-0.5
2,380,890	-		OLJFJH_11415	0.19	-2.4
2,380,890	-		OLJFJH_11415	0.19	-2.9
2,380,890	-		OLJFJH_11415	0.19	-1.0
2,380,948	-		OLJFJH_11415	0.27	-1.7
2,380,969	+		OLJFJH_11415	0.30	-1.4
2,380,969	+		OLJFJH_11415	0.30	-1.4
2,380,970	-		OLJFJH_11415	0.30	-0.3
2,380,992	+		OLJFJH_11415	0.34	-1.0
2,381,062	-		OLJFJH_11415	0.44	-1.8
2,381,182	+		OLJFJH_11415	0.62	-3.9
2,381,182	+		OLJFJH_11415	0.62	-1.8
2,381,182	+		OLJFJH_11415	0.62	-1.3
2,381,182	+		OLJFJH_11415	0.62	-0.7
2,381,182	+		OLJFJH_11415	0.62	-2.0
2,381,183	-		OLJFJH_11415	0.62	-1.5
2,381,183	-		OLJFJH_11415	0.62	-0.8
2,381,183	-		OLJFJH_11415	0.62	+1.6
2,381,191	+		OLJFJH_11415	0.63	-0.2
2,381,191	+		OLJFJH_11415	0.63	-1.5
2,381,192	-		OLJFJH_11415	0.63	-1.0
2,381,192	-		OLJFJH_11415	0.63	-1.4
2,381,192	-		OLJFJH_11415	0.63	-3.1
2,381,192	-		OLJFJH_11415	0.63	-2.1
2,381,236	+		OLJFJH_11415	0.70	-1.5
2,381,236	+		OLJFJH_11415	0.70	-2.3
2,381,236	+		OLJFJH_11415	0.70	-2.4
2,381,236	+		OLJFJH_11415	0.70	-3.1
2,381,236	+		OLJFJH_11415	0.70	-0.7
2,381,236	+		OLJFJH_11415	0.70	-2.3
2,381,237	-		OLJFJH_11415	0.70	-1.4
2,381,237	-		OLJFJH_11415	0.70	+0.3
2,381,237	-		OLJFJH_11415	0.70	-0.9
2,381,237	-		OLJFJH_11415	0.70	-2.6
2,381,238	+		OLJFJH_11415	0.70	-1.5
2,381,269	+		OLJFJH_11415	0.75	-0.9
2,381,269	+		OLJFJH_11415	0.75	-2.7
2,381,269	+		OLJFJH_11415	0.75	-0.8
2,381,270	-		OLJFJH_11415	0.75	-1.9
2,381,270	-		OLJFJH_11415	0.75	+0.5
2,381,270	-		OLJFJH_11415	0.75	+0.2
2,381,272	-		OLJFJH_11415	0.75	+0.5
2,381,291	+		OLJFJH_11415	0.78	-0.1
2,381,291	+		OLJFJH_11415	0.78	-1.4
2,381,291	+		OLJFJH_11415	0.78	-1.4
2,381,325	-		OLJFJH_11415	0.83	-1.4
2,381,353	+		OLJFJH_11415	0.87	-1.4
2,381,400	+				+0.0
2,381,437	+				-0.7
2,381,451	-				-0.6
2,381,489	+				-0.9
2,381,489	+				+0.2
2,381,490	-				-2.6
2,381,490	-				-0.8
2,381,490	-				-1.7
2,381,490	-				-2.2
2,381,490	-				-1.1
2,381,490	-				+0.1
2,381,557	+				+0.9
2,381,766	-		OLJFJH_11420	0.12	-0.5
2,381,999	-		OLJFJH_11420	0.24	-1.8
2,382,029	-		OLJFJH_11420	0.26	-0.7
2,382,199	+		OLJFJH_11420	0.36	-1.0
2,382,199	+		OLJFJH_11420	0.36	-2.0
2,382,199	+		OLJFJH_11420	0.36	-1.1
2,382,200	-		OLJFJH_11420	0.36	-3.7
2,382,200	-		OLJFJH_11420	0.36	+0.2
2,382,259	-		OLJFJH_11420	0.39	+0.5
2,382,356	+		OLJFJH_11420	0.44	-2.1
2,382,356	+		OLJFJH_11420	0.44	-0.7
2,382,357	-		OLJFJH_11420	0.44	-0.5
2,382,357	-		OLJFJH_11420	0.44	-1.2
2,382,357	-		OLJFJH_11420	0.44	-1.6
2,382,383	+		OLJFJH_11420	0.46	-2.8
2,382,384	-		OLJFJH_11420	0.46	-0.2
2,382,413	+		OLJFJH_11420	0.47	-1.1
2,382,413	+		OLJFJH_11420	0.47	-2.0