Strain Fitness in Erwinia amylovora T8 around OLJFJH_10220

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7
2,104,152	-				-0.2
2,104,227	-				+0.1
2,104,260	+				+0.2
2,104,260	+				+1.0
2,104,261	-				-1.8
2,104,365	+				+0.1
2,104,410	+				+0.6
2,104,523	+				-1.7
2,104,523	+				-2.4
2,104,524	-				-4.9
2,104,597	-		OLJFJH_10215	0.11	-0.7
2,104,607	+		OLJFJH_10215	0.13	-2.2
2,104,649	-		OLJFJH_10215	0.20	-3.3
2,104,679	+		OLJFJH_10215	0.26	-3.3
2,104,680	-		OLJFJH_10215	0.26	-2.9
2,104,743	+		OLJFJH_10215	0.37	-2.3
2,104,823	+		OLJFJH_10215	0.51	-1.6
2,104,824	-		OLJFJH_10215	0.51	-2.6
2,104,824	-		OLJFJH_10215	0.51	-1.9
2,104,824	-		OLJFJH_10215	0.51	-3.0
2,104,824	-		OLJFJH_10215	0.51	-0.2
2,104,874	+		OLJFJH_10215	0.60	-1.9
2,104,892	+		OLJFJH_10215	0.63	-0.7
2,104,892	+		OLJFJH_10215	0.63	-3.7
2,104,892	+		OLJFJH_10215	0.63	-3.8
2,104,893	-		OLJFJH_10215	0.63	-0.2
2,104,997	-		OLJFJH_10215	0.81	-1.9
2,105,678	-		OLJFJH_10220	0.83	-1.4
2,105,789	-				+0.5
2,105,789	-				+1.4
2,105,919	+		OLJFJH_10225	0.13	-0.5
2,105,920	-		OLJFJH_10225	0.14	-1.6
2,105,931	+		OLJFJH_10225	0.15	+0.2
2,105,932	-		OLJFJH_10225	0.15	+0.6
2,106,011	-		OLJFJH_10225	0.23	+0.0
2,106,011	-		OLJFJH_10225	0.23	-0.1
2,106,066	+		OLJFJH_10225	0.29	+1.2
2,106,067	-		OLJFJH_10225	0.29	+0.5
2,106,138	+		OLJFJH_10225	0.36	+0.4
2,106,168	+		OLJFJH_10225	0.39	+0.3
2,106,169	-		OLJFJH_10225	0.40	+0.5
2,106,224	-		OLJFJH_10225	0.45	-0.0
2,106,258	+		OLJFJH_10225	0.49	-0.8
2,106,258	+		OLJFJH_10225	0.49	+1.4
2,106,259	-		OLJFJH_10225	0.49	+0.4
2,106,259	-		OLJFJH_10225	0.49	-1.1
2,106,494	-		OLJFJH_10225	0.74	-0.5
2,106,567	-		OLJFJH_10225	0.81	+2.3
2,106,635	+		OLJFJH_10225	0.88	+0.1
2,106,636	-		OLJFJH_10225	0.88	+0.2
2,106,636	-		OLJFJH_10225	0.88	+2.0
2,106,638	+		OLJFJH_10225	0.89	-0.4
2,106,639	-		OLJFJH_10225	0.89	+0.2
2,106,639	-		OLJFJH_10225	0.89	-0.6
2,106,639	-		OLJFJH_10225	0.89	-0.4
2,106,723	-				-0.2
2,106,723	-				-0.5
2,106,725	+				+0.5
2,106,725	+				-0.5
2,106,725	+				-0.6
2,106,725	+				-0.4
2,106,725	+				+3.0
2,106,725	-				+0.3
2,106,726	-				-0.2
2,106,726	-				+0.0
2,106,726	-				-0.5
2,106,726	-				+0.3
2,106,726	-				-0.7
2,106,784	+				+1.1