Strain Fitness in Erwinia amylovora T8 around OLJFJH_09575

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7
1,979,087	+		OLJFJH_09565	0.84	+2.3
1,979,087	+		OLJFJH_09565	0.84	-0.6
1,979,087	+		OLJFJH_09565	0.84	-0.7
1,979,087	+		OLJFJH_09565	0.84	-0.2
1,979,088	-		OLJFJH_09565	0.84	+0.2
1,979,157	+				+0.6
1,979,175	+				-0.1
1,979,462	+				-1.2
1,979,463	-				-2.1
1,979,581	+		OLJFJH_09570	0.33	-2.3
1,979,581	+		OLJFJH_09570	0.33	-0.2
1,979,582	-		OLJFJH_09570	0.34	-0.4
1,979,582	-		OLJFJH_09570	0.34	-1.2
1,979,582	-		OLJFJH_09570	0.34	-0.7
1,979,582	-		OLJFJH_09570	0.34	-2.5
1,979,948	+				-1.4
1,979,948	+				-0.1
1,979,948	+				-0.2
1,979,949	-				-1.3
1,980,221	-		OLJFJH_09575	0.20	-1.9
1,980,269	-		OLJFJH_09575	0.25	+0.1
1,980,349	-		OLJFJH_09575	0.32	-2.0
1,980,514	+		OLJFJH_09575	0.48	-0.3
1,980,536	-		OLJFJH_09575	0.50	+0.5
1,980,536	-		OLJFJH_09575	0.50	-2.0
1,980,580	+		OLJFJH_09575	0.54	-0.9
1,980,660	-		OLJFJH_09575	0.61	-0.5
1,980,660	-		OLJFJH_09575	0.61	-0.1
1,980,701	-		OLJFJH_09575	0.65	+1.7
1,980,808	+		OLJFJH_09575	0.75	+1.4
1,980,809	-		OLJFJH_09575	0.75	-1.0
1,980,812	-		OLJFJH_09575	0.76	-0.5
1,980,878	+		OLJFJH_09575	0.82	+0.6
1,980,884	+		OLJFJH_09575	0.82	-1.3
1,980,885	-		OLJFJH_09575	0.82	-2.1
1,980,970	+				-0.7
1,980,971	-				-0.2
1,980,976	-				+0.8
1,981,118	+				-0.5
1,981,199	+				+0.8
1,981,199	+				+0.2
1,981,200	-				+0.1
1,981,267	-				+0.2
1,981,286	+				-0.2
1,981,314	-				+2.1
1,981,362	-		OLJFJH_09580	0.11	+0.2
1,981,383	-		OLJFJH_09580	0.15	+1.5
1,981,403	+		OLJFJH_09580	0.19	-1.7
1,981,548	+		OLJFJH_09580	0.47	+1.1
1,981,548	+		OLJFJH_09580	0.47	+0.6
1,981,763	+		OLJFJH_09580	0.89	+0.8
1,981,785	-				-0.7
1,981,870	+				+0.9
1,981,870	+				+1.0