Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04365 and OLJFJH_04370 are separated by 288 nucleotides OLJFJH_04370 and OLJFJH_04375 overlap by 11 nucleotides OLJFJH_04375 and OLJFJH_04380 are separated by 5 nucleotides
OLJFJH_04365: OLJFJH_04365 - RNA polymerase sigma factor RpoH, at 841,745 to 842,599
_04365
OLJFJH_04370: OLJFJH_04370 - permease-like cell division protein FtsX, at 842,888 to 843,880
_04370
OLJFJH_04375: OLJFJH_04375 - cell division ATP-binding protein FtsE, at 843,870 to 844,538
_04375
OLJFJH_04380: OLJFJH_04380 - signal recognition particle-docking protein FtsY, at 844,544 to 846,028
_04380
Position (kb) 842
843
844 Strain fitness (log2 ratio) -2
-1
0
1
2 at 842.660 kb on - strand at 842.679 kb on + strand at 842.680 kb on - strand at 842.810 kb on + strand at 842.810 kb on + strand at 842.811 kb on - strand at 842.863 kb on + strand at 842.864 kb on - strand at 842.864 kb on - strand at 842.864 kb on - strand at 842.865 kb on + strand at 842.890 kb on - strand at 842.890 kb on - strand at 843.127 kb on - strand, within OLJFJH_04370 at 843.128 kb on + strand, within OLJFJH_04370 at 843.128 kb on + strand, within OLJFJH_04370 at 843.129 kb on - strand, within OLJFJH_04370 at 843.129 kb on - strand, within OLJFJH_04370 at 843.224 kb on - strand, within OLJFJH_04370 at 843.354 kb on - strand, within OLJFJH_04370 at 843.386 kb on - strand, within OLJFJH_04370 at 843.522 kb on + strand, within OLJFJH_04370 at 843.522 kb on + strand, within OLJFJH_04370 at 843.522 kb on + strand, within OLJFJH_04370 at 843.523 kb on - strand, within OLJFJH_04370 at 843.527 kb on - strand, within OLJFJH_04370 at 843.598 kb on + strand, within OLJFJH_04370 at 843.602 kb on + strand, within OLJFJH_04370 at 843.603 kb on - strand, within OLJFJH_04370 at 843.607 kb on - strand, within OLJFJH_04370 at 843.670 kb on + strand, within OLJFJH_04370 at 843.670 kb on + strand, within OLJFJH_04370 at 843.670 kb on + strand, within OLJFJH_04370 at 843.671 kb on - strand, within OLJFJH_04370 at 843.671 kb on - strand, within OLJFJH_04370 at 843.672 kb on + strand, within OLJFJH_04370 at 843.672 kb on + strand, within OLJFJH_04370 at 843.672 kb on + strand, within OLJFJH_04370 at 843.672 kb on + strand, within OLJFJH_04370 at 843.672 kb on + strand, within OLJFJH_04370 at 843.673 kb on - strand, within OLJFJH_04370 at 843.673 kb on - strand, within OLJFJH_04370 at 843.893 kb on - strand at 843.894 kb on + strand at 843.929 kb on + strand at 843.930 kb on - strand at 844.249 kb on + strand, within OLJFJH_04375 at 844.364 kb on + strand, within OLJFJH_04375 at 844.508 kb on - strand at 844.545 kb on + strand at 844.545 kb on + strand at 844.545 kb on + strand at 844.546 kb on - strand at 844.546 kb on - strand at 844.546 kb on - strand at 844.546 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7 remove 842,660 - -0.4 842,679 + +1.4 842,680 - +0.3 842,810 + -0.6 842,810 + -0.6 842,811 - -0.2 842,863 + +0.6 842,864 - +0.1 842,864 - -2.1 842,864 - -1.9 842,865 + +0.2 842,890 - +1.9 842,890 - -0.1 843,127 - OLJFJH_04370 0.24 +1.5 843,128 + OLJFJH_04370 0.24 -0.7 843,128 + OLJFJH_04370 0.24 -1.0 843,129 - OLJFJH_04370 0.24 -0.0 843,129 - OLJFJH_04370 0.24 -1.5 843,224 - OLJFJH_04370 0.34 +0.1 843,354 - OLJFJH_04370 0.47 +0.1 843,386 - OLJFJH_04370 0.50 -0.3 843,522 + OLJFJH_04370 0.64 -0.9 843,522 + OLJFJH_04370 0.64 -1.0 843,522 + OLJFJH_04370 0.64 -0.6 843,523 - OLJFJH_04370 0.64 -0.2 843,527 - OLJFJH_04370 0.64 +0.8 843,598 + OLJFJH_04370 0.72 -0.2 843,602 + OLJFJH_04370 0.72 -0.2 843,603 - OLJFJH_04370 0.72 -0.5 843,607 - OLJFJH_04370 0.72 -1.3 843,670 + OLJFJH_04370 0.79 +0.1 843,670 + OLJFJH_04370 0.79 -0.5 843,670 + OLJFJH_04370 0.79 -0.6 843,671 - OLJFJH_04370 0.79 -1.7 843,671 - OLJFJH_04370 0.79 -1.4 843,672 + OLJFJH_04370 0.79 -0.0 843,672 + OLJFJH_04370 0.79 +1.1 843,672 + OLJFJH_04370 0.79 -0.2 843,672 + OLJFJH_04370 0.79 -0.5 843,672 + OLJFJH_04370 0.79 -0.6 843,673 - OLJFJH_04370 0.79 -0.2 843,673 - OLJFJH_04370 0.79 -1.7 843,893 - -1.5 843,894 + -0.5 843,929 + -1.5 843,930 - +0.8 844,249 + OLJFJH_04375 0.57 -0.2 844,364 + OLJFJH_04375 0.74 +1.0 844,508 - +0.5 844,545 + +0.7 844,545 + +1.1 844,545 + -2.6 844,546 - -1.5 844,546 - -0.3 844,546 - +1.1 844,546 - +0.5
Or see this region's nucleotide sequence