Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_02600 and OLJFJH_02605 are separated by 36 nucleotides OLJFJH_02605 and OLJFJH_02610 are separated by 218 nucleotides OLJFJH_02610 and OLJFJH_02615 are separated by 367 nucleotides
OLJFJH_02600: OLJFJH_02600 - chaperonin GroEL, at 469,755 to 471,401
_02600
OLJFJH_02605: OLJFJH_02605 - co-chaperone GroES, at 471,438 to 471,731
_02605
OLJFJH_02610: OLJFJH_02610 - exclusion suppressor FxsA, at 471,950 to 472,408
_02610
OLJFJH_02615: OLJFJH_02615 - aspartate ammonia-lyase, at 472,776 to 474,212
_02615
Position (kb) 471
472
473 Strain fitness (log2 ratio) -1
0
1
2
3 at 471.890 kb on + strand at 471.890 kb on + strand at 471.905 kb on - strand at 471.951 kb on + strand at 471.951 kb on + strand at 472.283 kb on + strand, within OLJFJH_02610 at 472.283 kb on + strand, within OLJFJH_02610 at 472.284 kb on - strand, within OLJFJH_02610 at 472.284 kb on - strand, within OLJFJH_02610 at 472.320 kb on - strand, within OLJFJH_02610 at 472.385 kb on - strand at 472.385 kb on - strand at 472.421 kb on + strand at 472.421 kb on + strand at 472.422 kb on - strand at 472.481 kb on + strand at 472.481 kb on + strand at 472.482 kb on - strand at 472.482 kb on - strand at 472.482 kb on - strand at 472.482 kb on - strand at 472.482 kb on - strand at 472.482 kb on - strand at 472.485 kb on + strand at 472.639 kb on - strand at 472.639 kb on - strand at 472.700 kb on - strand at 472.748 kb on + strand at 472.749 kb on - strand at 472.749 kb on - strand at 472.785 kb on - strand at 472.839 kb on + strand at 472.853 kb on + strand at 472.853 kb on + strand at 472.854 kb on - strand at 472.854 kb on - strand at 472.854 kb on - strand at 472.883 kb on + strand at 472.884 kb on - strand at 472.905 kb on - strand at 472.937 kb on + strand, within OLJFJH_02615 at 473.003 kb on + strand, within OLJFJH_02615 at 473.043 kb on - strand, within OLJFJH_02615 at 473.160 kb on + strand, within OLJFJH_02615 at 473.160 kb on + strand, within OLJFJH_02615 at 473.223 kb on - strand, within OLJFJH_02615 at 473.321 kb on + strand, within OLJFJH_02615 at 473.322 kb on - strand, within OLJFJH_02615 at 473.322 kb on - strand, within OLJFJH_02615 at 473.350 kb on + strand, within OLJFJH_02615
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7 remove 471,890 + -1.0 471,890 + +0.5 471,905 - -0.7 471,951 + +2.1 471,951 + +1.0 472,283 + OLJFJH_02610 0.73 +0.8 472,283 + OLJFJH_02610 0.73 -1.7 472,284 - OLJFJH_02610 0.73 +0.3 472,284 - OLJFJH_02610 0.73 -0.0 472,320 - OLJFJH_02610 0.81 -0.4 472,385 - -1.3 472,385 - +0.5 472,421 + +1.4 472,421 + +1.4 472,422 - +1.0 472,481 + +0.3 472,481 + +0.6 472,482 - -0.5 472,482 - -1.2 472,482 - -0.1 472,482 - -1.5 472,482 - +0.4 472,482 - +0.5 472,485 + +2.5 472,639 - -0.6 472,639 - -0.1 472,700 - +1.0 472,748 + +3.0 472,749 - -0.8 472,749 - -0.4 472,785 - -0.2 472,839 + +0.2 472,853 + +0.1 472,853 + -0.2 472,854 - -0.1 472,854 - -0.7 472,854 - +0.1 472,883 + -0.4 472,884 - -0.4 472,905 - -0.2 472,937 + OLJFJH_02615 0.11 -0.8 473,003 + OLJFJH_02615 0.16 -0.2 473,043 - OLJFJH_02615 0.19 +0.6 473,160 + OLJFJH_02615 0.27 +0.1 473,160 + OLJFJH_02615 0.27 -0.4 473,223 - OLJFJH_02615 0.31 -0.1 473,321 + OLJFJH_02615 0.38 +0.6 473,322 - OLJFJH_02615 0.38 -0.8 473,322 - OLJFJH_02615 0.38 -0.4 473,350 + OLJFJH_02615 0.40 +1.0
Or see this region's nucleotide sequence