Strain Fitness in Erwinia amylovora T8 around OLJFJH_17495

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-5
3,690,627	+				-0.9
3,690,627	+				+0.0
3,690,627	+				+1.2
3,690,680	+				-0.1
3,690,680	+				-0.2
3,690,681	-				+0.1
3,690,681	-				+0.8
3,690,681	-				+0.7
3,690,682	+				-0.1
3,690,682	+				-0.5
3,690,682	+				+1.2
3,690,682	+				+1.6
3,690,682	+				-1.8
3,690,682	+				+0.6
3,690,682	+				+0.0
3,690,682	+				+0.3
3,690,683	-				+1.1
3,690,683	-				+2.4
3,690,683	-				-1.0
3,690,683	-				+1.2
3,690,683	-				-2.7
3,690,683	-				+1.6
3,690,741	-				-0.6
3,690,741	-				-0.4
3,690,864	+		OLJFJH_17490	0.14	-0.0
3,691,034	-		OLJFJH_17490	0.38	-0.6
3,691,063	+		OLJFJH_17490	0.42	-0.1
3,691,063	+		OLJFJH_17490	0.42	-0.7
3,691,063	+		OLJFJH_17490	0.42	+3.0
3,691,064	-		OLJFJH_17490	0.42	-1.5
3,691,064	-		OLJFJH_17490	0.42	+2.0
3,691,064	-		OLJFJH_17490	0.42	-0.3
3,691,177	-		OLJFJH_17490	0.59	+2.2
3,691,222	+		OLJFJH_17490	0.65	+0.0
3,691,260	+		OLJFJH_17490	0.70	-0.4
3,691,261	-		OLJFJH_17490	0.71	+2.3
3,691,261	-		OLJFJH_17490	0.71	-0.4
3,691,261	-		OLJFJH_17490	0.71	+1.1
3,691,294	+		OLJFJH_17490	0.75	+0.1
3,691,295	-		OLJFJH_17490	0.75	-0.4
3,691,349	-		OLJFJH_17490	0.83	+3.0
3,691,394	-		OLJFJH_17490	0.89	-1.2
3,691,394	-		OLJFJH_17490	0.89	-0.6
3,691,525	+				-0.3
3,691,529	+				+1.1
3,691,530	-				-0.7
3,691,530	-				+0.6
3,691,530	-				-0.9
3,691,597	+				-0.6
3,691,597	+				+2.6
3,691,597	+				+0.1
3,691,597	+				+0.8
3,691,598	-				-0.8
3,691,598	-				+0.6
3,691,599	+				-0.2
3,691,629	+				-0.1
3,691,630	-				-0.1
3,691,674	+		OLJFJH_17495	0.12	-0.9
3,691,776	+		OLJFJH_17495	0.21	-0.7
3,691,845	+		OLJFJH_17495	0.26	-0.8
3,691,858	+		OLJFJH_17495	0.28	+0.5
3,691,859	-		OLJFJH_17495	0.28	-1.1
3,691,915	-		OLJFJH_17495	0.32	+0.6
3,691,948	-		OLJFJH_17495	0.35	+2.1
3,691,953	+		OLJFJH_17495	0.35	-0.6
3,692,051	-		OLJFJH_17495	0.44	-0.9
3,692,106	+		OLJFJH_17495	0.48	-0.3
3,692,530	+		OLJFJH_17495	0.83	-0.5
3,692,530	+		OLJFJH_17495	0.83	+0.5
3,692,632	+				-1.0
3,692,632	+				+1.1
3,692,632	+				-0.3
3,692,632	+				+1.5
3,692,632	+				-0.6
3,692,633	-				-0.2
3,692,633	-				+0.8
3,692,633	-				+0.1
3,692,633	-				+0.7
3,692,633	-				-1.1
3,692,662	+				-0.0
3,692,662	+				+0.3
3,692,663	-				-0.1
3,692,682	+				+1.0
3,692,682	+				+0.9
3,692,682	+				-1.1
3,692,686	+				+2.2
3,692,686	+				-1.3
3,692,687	-				-0.9
3,692,687	-				+0.0
3,692,687	-				-0.3
3,692,789	-		OLJFJH_17500	0.16	+0.6
3,692,847	-		OLJFJH_17500	0.33	-1.0
3,692,847	-		OLJFJH_17500	0.33	+0.1
3,692,847	-		OLJFJH_17500	0.33	+0.6
3,692,866	-		OLJFJH_17500	0.39	+1.5
3,692,910	+		OLJFJH_17500	0.53	-1.1
3,692,910	+		OLJFJH_17500	0.53	+0.2
3,692,911	-		OLJFJH_17500	0.53	-0.1
3,692,911	-		OLJFJH_17500	0.53	+0.2
3,692,911	-		OLJFJH_17500	0.53	-0.9
3,692,911	-		OLJFJH_17500	0.53	-0.3
3,692,914	+		OLJFJH_17500	0.54	-0.2
3,692,914	+		OLJFJH_17500	0.54	+2.1
3,692,914	+		OLJFJH_17500	0.54	+0.1
3,692,915	-		OLJFJH_17500	0.54	+1.2
3,692,999	-		OLJFJH_17500	0.80	+0.2
3,693,142	+		OLJFJH_17505	0.44	-0.6
3,693,143	-		OLJFJH_17505	0.45	+0.4
3,693,267	-				+0.3
3,693,323	+				-0.2
3,693,345	-				-0.2
3,693,405	-				+0.8
3,693,405	-				+1.0
3,693,407	-				+1.3
3,693,408	+				-0.5
3,693,408	+				-0.3
3,693,430	+				-0.7
3,693,431	-				+0.3
3,693,477	+				+0.4
3,693,477	+				-0.0
3,693,477	+				+0.4
3,693,477	+				+1.7
3,693,477	+				-0.6
3,693,477	+				-2.0
3,693,478	-				+1.0
3,693,478	-				+0.6
3,693,478	-				+1.2
3,693,478	-				-0.3
3,693,508	+				-0.4
3,693,509	-				+1.7