Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08075 and A4249_RS17040 are separated by 3 nucleotides A4249_RS17040 and A4249_RS08080 are separated by 122 nucleotides
A4249_RS08075: A4249_RS08075 - hypothetical protein, at 1,616,533 to 1,617,372
_RS08075
A4249_RS17040: A4249_RS17040 - hypothetical protein, at 1,617,376 to 1,617,507
_RS17040
A4249_RS08080: A4249_RS08080 - DNA-directed RNA polymerase subunit beta', at 1,617,630 to 1,621,826
_RS08080
Position (kb)
1617
1618 Strain fitness (log2 ratio)
-1
0
1 at 1616.710 kb on + strand, within A4249_RS08075 at 1616.710 kb on + strand, within A4249_RS08075 at 1616.710 kb on + strand, within A4249_RS08075 at 1616.710 kb on + strand, within A4249_RS08075 at 1616.711 kb on - strand, within A4249_RS08075 at 1616.711 kb on - strand, within A4249_RS08075 at 1616.711 kb on - strand, within A4249_RS08075 at 1616.711 kb on - strand, within A4249_RS08075 at 1616.711 kb on - strand, within A4249_RS08075 at 1616.711 kb on - strand, within A4249_RS08075 at 1616.711 kb on - strand, within A4249_RS08075 at 1616.711 kb on - strand, within A4249_RS08075 at 1616.711 kb on - strand, within A4249_RS08075 at 1616.711 kb on - strand, within A4249_RS08075 at 1616.711 kb on - strand, within A4249_RS08075 at 1616.711 kb on - strand, within A4249_RS08075 at 1616.712 kb on + strand, within A4249_RS08075 at 1616.713 kb on - strand, within A4249_RS08075 at 1617.245 kb on + strand, within A4249_RS08075 at 1617.246 kb on - strand, within A4249_RS08075 at 1617.246 kb on - strand, within A4249_RS08075 at 1617.246 kb on - strand, within A4249_RS08075 at 1617.361 kb on - strand at 1617.361 kb on - strand at 1617.361 kb on - strand at 1617.361 kb on - strand at 1617.377 kb on + strand at 1617.377 kb on + strand at 1617.377 kb on + strand at 1617.378 kb on - strand at 1617.378 kb on - strand at 1617.392 kb on + strand, within A4249_RS17040 at 1617.393 kb on - strand, within A4249_RS17040 at 1617.393 kb on - strand, within A4249_RS17040 at 1617.393 kb on - strand, within A4249_RS17040 at 1617.475 kb on + strand, within A4249_RS17040 at 1617.518 kb on + strand at 1617.518 kb on + strand at 1617.518 kb on + strand at 1617.518 kb on + strand at 1617.519 kb on - strand at 1617.519 kb on - strand at 1617.519 kb on - strand at 1617.567 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,616,710 + A4249_RS08075 0.21 -0.3 1,616,710 + A4249_RS08075 0.21 +0.6 1,616,710 + A4249_RS08075 0.21 -0.0 1,616,710 + A4249_RS08075 0.21 +0.7 1,616,711 - A4249_RS08075 0.21 -0.7 1,616,711 - A4249_RS08075 0.21 +0.1 1,616,711 - A4249_RS08075 0.21 +0.1 1,616,711 - A4249_RS08075 0.21 +0.1 1,616,711 - A4249_RS08075 0.21 -0.2 1,616,711 - A4249_RS08075 0.21 +0.1 1,616,711 - A4249_RS08075 0.21 -0.1 1,616,711 - A4249_RS08075 0.21 +0.1 1,616,711 - A4249_RS08075 0.21 +1.5 1,616,711 - A4249_RS08075 0.21 +0.1 1,616,711 - A4249_RS08075 0.21 +1.3 1,616,711 - A4249_RS08075 0.21 -0.7 1,616,712 + A4249_RS08075 0.21 +0.0 1,616,713 - A4249_RS08075 0.21 -0.3 1,617,245 + A4249_RS08075 0.85 +1.1 1,617,246 - A4249_RS08075 0.85 +0.0 1,617,246 - A4249_RS08075 0.85 -0.3 1,617,246 - A4249_RS08075 0.85 +0.2 1,617,361 - +1.7 1,617,361 - -0.4 1,617,361 - -0.3 1,617,361 - -0.4 1,617,377 + -0.3 1,617,377 + +0.2 1,617,377 + +0.2 1,617,378 - -0.4 1,617,378 - -0.8 1,617,392 + A4249_RS17040 0.12 +0.3 1,617,393 - A4249_RS17040 0.13 -0.1 1,617,393 - A4249_RS17040 0.13 -0.3 1,617,393 - A4249_RS17040 0.13 -0.9 1,617,475 + A4249_RS17040 0.75 -0.5 1,617,518 + -0.5 1,617,518 + -0.1 1,617,518 + -0.1 1,617,518 + -0.2 1,617,519 - -0.2 1,617,519 - +0.7 1,617,519 - +0.1 1,617,567 - +0.0
Or see this region's nucleotide sequence