Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10735 and A4249_RS17005 are separated by 29 nucleotides A4249_RS17005 and A4249_RS17010 are separated by 34 nucleotides A4249_RS17010 and A4249_RS10745 are separated by 90 nucleotides A4249_RS10745 and A4249_RS10750 are separated by 81 nucleotides A4249_RS10750 and A4249_RS10755 overlap by 4 nucleotides
A4249_RS10735: A4249_RS10735 - phosphogluconate dehydratase, at 2,157,489 to 2,159,378
_RS10735
A4249_RS17005: A4249_RS17005 - glucokinase, at 2,159,408 to 2,159,950
_RS17005
A4249_RS17010: A4249_RS17010 - glucokinase, at 2,159,985 to 2,160,395
_RS17010
A4249_RS10745: A4249_RS10745 - hypothetical protein, at 2,160,486 to 2,160,791
_RS10745
A4249_RS10750: A4249_RS10750 - hypothetical protein, at 2,160,873 to 2,161,235
_RS10750
A4249_RS10755: A4249_RS10755 - homogentisate 1,2-dioxygenase, at 2,161,232 to 2,162,527
_RS10755
Position (kb)
2159
2160
2161 Strain fitness (log2 ratio)
-1
0
1 at 2159.377 kb on - strand at 2159.377 kb on - strand at 2159.377 kb on - strand at 2159.377 kb on - strand at 2159.543 kb on + strand, within A4249_RS17005 at 2159.543 kb on + strand, within A4249_RS17005 at 2159.544 kb on - strand, within A4249_RS17005 at 2160.210 kb on + strand, within A4249_RS17010 at 2160.210 kb on + strand, within A4249_RS17010 at 2160.210 kb on + strand, within A4249_RS17010 at 2160.210 kb on + strand, within A4249_RS17010 at 2160.210 kb on + strand, within A4249_RS17010 at 2160.211 kb on - strand, within A4249_RS17010 at 2160.211 kb on - strand, within A4249_RS17010 at 2160.211 kb on - strand, within A4249_RS17010 at 2160.303 kb on + strand, within A4249_RS17010 at 2160.303 kb on + strand, within A4249_RS17010 at 2160.303 kb on + strand, within A4249_RS17010 at 2160.304 kb on - strand, within A4249_RS17010 at 2160.304 kb on - strand, within A4249_RS17010 at 2160.304 kb on - strand, within A4249_RS17010 at 2160.305 kb on + strand, within A4249_RS17010 at 2160.305 kb on + strand, within A4249_RS17010 at 2160.305 kb on + strand, within A4249_RS17010 at 2160.305 kb on + strand, within A4249_RS17010 at 2160.305 kb on + strand, within A4249_RS17010 at 2160.305 kb on + strand, within A4249_RS17010 at 2160.305 kb on + strand, within A4249_RS17010 at 2160.305 kb on + strand, within A4249_RS17010 at 2160.305 kb on + strand, within A4249_RS17010 at 2160.305 kb on + strand, within A4249_RS17010 at 2160.306 kb on - strand, within A4249_RS17010 at 2160.306 kb on - strand, within A4249_RS17010 at 2160.306 kb on - strand, within A4249_RS17010 at 2160.306 kb on - strand, within A4249_RS17010 at 2160.306 kb on - strand, within A4249_RS17010 at 2160.306 kb on - strand, within A4249_RS17010 at 2160.449 kb on - strand at 2160.469 kb on + strand at 2160.469 kb on + strand at 2160.469 kb on + strand at 2160.470 kb on - strand at 2160.470 kb on - strand at 2160.470 kb on - strand at 2160.482 kb on + strand at 2160.762 kb on - strand at 2160.789 kb on + strand at 2160.789 kb on + strand at 2160.790 kb on - strand at 2160.790 kb on - strand at 2160.808 kb on - strand at 2160.817 kb on + strand at 2160.818 kb on - strand at 2160.920 kb on + strand, within A4249_RS10750 at 2160.921 kb on - strand, within A4249_RS10750 at 2160.921 kb on - strand, within A4249_RS10750 at 2160.921 kb on - strand, within A4249_RS10750 at 2160.921 kb on - strand, within A4249_RS10750 at 2160.921 kb on - strand, within A4249_RS10750 at 2160.921 kb on - strand, within A4249_RS10750 at 2160.921 kb on - strand, within A4249_RS10750 at 2161.058 kb on - strand, within A4249_RS10750 at 2161.275 kb on + strand at 2161.275 kb on + strand at 2161.276 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,159,377 - -0.9 2,159,377 - +0.3 2,159,377 - -0.0 2,159,377 - +1.2 2,159,543 + A4249_RS17005 0.25 +0.1 2,159,543 + A4249_RS17005 0.25 +0.2 2,159,544 - A4249_RS17005 0.25 +0.4 2,160,210 + A4249_RS17010 0.55 +0.6 2,160,210 + A4249_RS17010 0.55 -0.2 2,160,210 + A4249_RS17010 0.55 +0.4 2,160,210 + A4249_RS17010 0.55 +0.0 2,160,210 + A4249_RS17010 0.55 -0.2 2,160,211 - A4249_RS17010 0.55 +0.2 2,160,211 - A4249_RS17010 0.55 -0.7 2,160,211 - A4249_RS17010 0.55 +0.2 2,160,303 + A4249_RS17010 0.77 +0.1 2,160,303 + A4249_RS17010 0.77 +0.3 2,160,303 + A4249_RS17010 0.77 +0.1 2,160,304 - A4249_RS17010 0.78 -0.5 2,160,304 - A4249_RS17010 0.78 -0.5 2,160,304 - A4249_RS17010 0.78 +0.2 2,160,305 + A4249_RS17010 0.78 -0.3 2,160,305 + A4249_RS17010 0.78 +1.4 2,160,305 + A4249_RS17010 0.78 -0.4 2,160,305 + A4249_RS17010 0.78 +0.3 2,160,305 + A4249_RS17010 0.78 -0.0 2,160,305 + A4249_RS17010 0.78 -0.6 2,160,305 + A4249_RS17010 0.78 -0.3 2,160,305 + A4249_RS17010 0.78 +0.2 2,160,305 + A4249_RS17010 0.78 +0.5 2,160,305 + A4249_RS17010 0.78 +0.5 2,160,306 - A4249_RS17010 0.78 -0.2 2,160,306 - A4249_RS17010 0.78 -0.1 2,160,306 - A4249_RS17010 0.78 +0.1 2,160,306 - A4249_RS17010 0.78 +0.0 2,160,306 - A4249_RS17010 0.78 +0.4 2,160,306 - A4249_RS17010 0.78 +1.4 2,160,449 - +0.3 2,160,469 + -0.0 2,160,469 + -0.2 2,160,469 + -0.3 2,160,470 - -0.1 2,160,470 - -0.1 2,160,470 - -0.5 2,160,482 + +0.2 2,160,762 - -0.2 2,160,789 + +0.7 2,160,789 + -0.6 2,160,790 - -0.1 2,160,790 - +0.5 2,160,808 - +1.1 2,160,817 + -0.3 2,160,818 - -0.7 2,160,920 + A4249_RS10750 0.13 -0.3 2,160,921 - A4249_RS10750 0.13 +0.1 2,160,921 - A4249_RS10750 0.13 +0.3 2,160,921 - A4249_RS10750 0.13 -0.2 2,160,921 - A4249_RS10750 0.13 -1.2 2,160,921 - A4249_RS10750 0.13 -0.4 2,160,921 - A4249_RS10750 0.13 -0.2 2,160,921 - A4249_RS10750 0.13 +0.2 2,161,058 - A4249_RS10750 0.51 -0.1 2,161,275 + -0.4 2,161,275 + -0.1 2,161,276 - -0.3
Or see this region's nucleotide sequence