Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15280 and A4249_RS16830 are separated by 200 nucleotides A4249_RS16830 and A4249_RS15285 are separated by 18 nucleotides A4249_RS15285 and A4249_RS15290 are separated by 228 nucleotides A4249_RS15290 and A4249_RS15295 overlap by 13 nucleotides
A4249_RS15280: A4249_RS15280 - hypothetical protein, at 3,092,251 to 3,093,855
_RS15280
A4249_RS16830: A4249_RS16830 - hypothetical protein, at 3,094,056 to 3,094,202
_RS16830
A4249_RS15285: A4249_RS15285 - hypothetical protein, at 3,094,221 to 3,094,595
_RS15285
A4249_RS15290: A4249_RS15290 - malate synthase G, at 3,094,824 to 3,096,968
_RS15290
A4249_RS15295: A4249_RS15295 - mechanosensitive ion channel, at 3,096,956 to 3,098,005
_RS15295
Position (kb)
3094
3095
3096
3097 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3093.855 kb on + strand at 3093.855 kb on + strand at 3093.855 kb on + strand at 3093.855 kb on + strand at 3093.855 kb on + strand at 3093.855 kb on + strand at 3093.855 kb on + strand at 3093.855 kb on + strand at 3093.855 kb on + strand at 3093.855 kb on + strand at 3093.856 kb on - strand at 3093.856 kb on - strand at 3093.930 kb on + strand at 3093.930 kb on + strand at 3093.930 kb on + strand at 3093.930 kb on + strand at 3093.931 kb on - strand at 3093.931 kb on - strand at 3093.931 kb on - strand at 3093.935 kb on + strand at 3093.935 kb on + strand at 3093.935 kb on + strand at 3093.936 kb on - strand at 3094.037 kb on + strand at 3094.083 kb on - strand, within A4249_RS16830 at 3094.151 kb on + strand, within A4249_RS16830 at 3094.152 kb on - strand, within A4249_RS16830 at 3094.152 kb on - strand, within A4249_RS16830 at 3094.156 kb on + strand, within A4249_RS16830 at 3094.157 kb on - strand, within A4249_RS16830 at 3094.498 kb on + strand, within A4249_RS15285 at 3094.498 kb on + strand, within A4249_RS15285 at 3094.499 kb on - strand, within A4249_RS15285 at 3094.499 kb on - strand, within A4249_RS15285 at 3094.499 kb on - strand, within A4249_RS15285 at 3094.499 kb on - strand, within A4249_RS15285 at 3094.499 kb on - strand, within A4249_RS15285 at 3094.499 kb on - strand, within A4249_RS15285 at 3094.499 kb on - strand, within A4249_RS15285 at 3094.633 kb on + strand at 3094.645 kb on + strand at 3094.645 kb on + strand at 3094.645 kb on + strand at 3094.645 kb on + strand at 3094.646 kb on - strand at 3094.646 kb on - strand at 3094.715 kb on + strand at 3094.715 kb on + strand at 3094.715 kb on + strand at 3094.715 kb on + strand at 3094.716 kb on - strand at 3094.716 kb on - strand at 3094.716 kb on - strand at 3094.716 kb on - strand at 3094.716 kb on - strand at 3094.716 kb on - strand at 3094.716 kb on - strand at 3094.894 kb on + strand at 3094.894 kb on + strand at 3094.894 kb on + strand at 3094.894 kb on + strand at 3094.894 kb on + strand at 3094.895 kb on - strand at 3094.895 kb on - strand at 3094.895 kb on - strand at 3094.895 kb on - strand at 3094.895 kb on - strand at 3094.895 kb on - strand at 3094.895 kb on - strand at 3094.895 kb on - strand at 3094.895 kb on - strand at 3094.895 kb on - strand at 3094.895 kb on - strand at 3094.895 kb on - strand at 3094.895 kb on - strand at 3095.049 kb on + strand, within A4249_RS15290 at 3095.049 kb on + strand, within A4249_RS15290 at 3095.049 kb on + strand, within A4249_RS15290 at 3095.049 kb on + strand, within A4249_RS15290 at 3095.049 kb on + strand, within A4249_RS15290 at 3095.050 kb on - strand, within A4249_RS15290 at 3095.050 kb on - strand, within A4249_RS15290 at 3095.050 kb on - strand, within A4249_RS15290 at 3095.050 kb on - strand, within A4249_RS15290 at 3095.091 kb on + strand, within A4249_RS15290 at 3095.238 kb on + strand, within A4249_RS15290 at 3095.238 kb on + strand, within A4249_RS15290 at 3095.239 kb on - strand, within A4249_RS15290 at 3095.239 kb on - strand, within A4249_RS15290 at 3095.239 kb on - strand, within A4249_RS15290 at 3095.239 kb on - strand, within A4249_RS15290 at 3095.239 kb on - strand, within A4249_RS15290 at 3095.239 kb on - strand, within A4249_RS15290 at 3095.239 kb on - strand, within A4249_RS15290 at 3095.239 kb on - strand, within A4249_RS15290 at 3095.251 kb on - strand, within A4249_RS15290 at 3095.251 kb on - strand, within A4249_RS15290 at 3095.293 kb on - strand, within A4249_RS15290 at 3095.293 kb on - strand, within A4249_RS15290 at 3095.293 kb on - strand, within A4249_RS15290 at 3095.375 kb on + strand, within A4249_RS15290 at 3095.398 kb on + strand, within A4249_RS15290 at 3095.398 kb on + strand, within A4249_RS15290 at 3095.399 kb on - strand, within A4249_RS15290 at 3095.399 kb on - strand, within A4249_RS15290 at 3095.656 kb on - strand, within A4249_RS15290 at 3095.913 kb on + strand, within A4249_RS15290 at 3095.913 kb on + strand, within A4249_RS15290 at 3095.913 kb on + strand, within A4249_RS15290 at 3095.913 kb on + strand, within A4249_RS15290 at 3095.913 kb on + strand, within A4249_RS15290 at 3095.913 kb on + strand, within A4249_RS15290 at 3095.913 kb on + strand, within A4249_RS15290 at 3095.913 kb on + strand, within A4249_RS15290 at 3095.913 kb on + strand, within A4249_RS15290 at 3095.914 kb on - strand, within A4249_RS15290 at 3095.914 kb on - strand, within A4249_RS15290 at 3095.914 kb on - strand, within A4249_RS15290 at 3095.914 kb on - strand, within A4249_RS15290 at 3095.914 kb on - strand, within A4249_RS15290 at 3095.914 kb on - strand, within A4249_RS15290 at 3095.914 kb on - strand, within A4249_RS15290 at 3095.914 kb on - strand, within A4249_RS15290 at 3095.914 kb on - strand, within A4249_RS15290 at 3095.914 kb on - strand, within A4249_RS15290 at 3095.918 kb on + strand, within A4249_RS15290 at 3095.918 kb on + strand, within A4249_RS15290 at 3095.918 kb on + strand, within A4249_RS15290 at 3095.919 kb on - strand, within A4249_RS15290 at 3095.919 kb on - strand, within A4249_RS15290 at 3095.919 kb on - strand, within A4249_RS15290 at 3095.919 kb on - strand, within A4249_RS15290 at 3095.919 kb on - strand, within A4249_RS15290 at 3095.964 kb on + strand, within A4249_RS15290 at 3095.964 kb on + strand, within A4249_RS15290 at 3095.964 kb on + strand, within A4249_RS15290 at 3095.965 kb on - strand, within A4249_RS15290 at 3095.965 kb on - strand, within A4249_RS15290 at 3096.258 kb on + strand, within A4249_RS15290 at 3096.258 kb on + strand, within A4249_RS15290 at 3096.259 kb on - strand, within A4249_RS15290 at 3096.259 kb on - strand, within A4249_RS15290 at 3096.259 kb on - strand, within A4249_RS15290 at 3096.259 kb on - strand, within A4249_RS15290 at 3096.447 kb on + strand, within A4249_RS15290 at 3096.447 kb on + strand, within A4249_RS15290 at 3096.447 kb on + strand, within A4249_RS15290 at 3096.448 kb on - strand, within A4249_RS15290 at 3096.448 kb on - strand, within A4249_RS15290 at 3096.448 kb on - strand, within A4249_RS15290 at 3096.448 kb on - strand, within A4249_RS15290 at 3096.518 kb on - strand, within A4249_RS15290 at 3096.518 kb on - strand, within A4249_RS15290 at 3096.518 kb on - strand, within A4249_RS15290 at 3096.598 kb on + strand, within A4249_RS15290 at 3096.598 kb on + strand, within A4249_RS15290 at 3096.598 kb on + strand, within A4249_RS15290 at 3096.599 kb on - strand, within A4249_RS15290 at 3096.599 kb on - strand, within A4249_RS15290 at 3096.599 kb on - strand, within A4249_RS15290 at 3096.606 kb on + strand, within A4249_RS15290 at 3096.606 kb on + strand, within A4249_RS15290 at 3096.606 kb on + strand, within A4249_RS15290 at 3096.606 kb on + strand, within A4249_RS15290 at 3096.607 kb on - strand, within A4249_RS15290 at 3096.607 kb on - strand, within A4249_RS15290 at 3096.607 kb on - strand, within A4249_RS15290 at 3096.607 kb on - strand, within A4249_RS15290 at 3096.607 kb on - strand, within A4249_RS15290 at 3096.607 kb on - strand, within A4249_RS15290 at 3096.713 kb on + strand, within A4249_RS15290 at 3096.713 kb on + strand, within A4249_RS15290 at 3096.743 kb on + strand, within A4249_RS15290 at 3096.743 kb on + strand, within A4249_RS15290 at 3096.743 kb on + strand, within A4249_RS15290 at 3096.819 kb on + strand at 3096.819 kb on + strand at 3096.819 kb on + strand at 3096.858 kb on + strand at 3096.858 kb on + strand at 3096.858 kb on + strand at 3096.909 kb on + strand at 3096.910 kb on - strand at 3096.910 kb on - strand at 3097.149 kb on - strand, within A4249_RS15295 at 3097.221 kb on + strand, within A4249_RS15295 at 3097.222 kb on - strand, within A4249_RS15295 at 3097.289 kb on + strand, within A4249_RS15295 at 3097.290 kb on - strand, within A4249_RS15295 at 3097.290 kb on - strand, within A4249_RS15295 at 3097.416 kb on + strand, within A4249_RS15295 at 3097.417 kb on - strand, within A4249_RS15295 at 3097.417 kb on - strand, within A4249_RS15295 at 3097.600 kb on + strand, within A4249_RS15295 at 3097.601 kb on - strand, within A4249_RS15295 at 3097.601 kb on - strand, within A4249_RS15295 at 3097.601 kb on - strand, within A4249_RS15295 at 3097.601 kb on - strand, within A4249_RS15295 at 3097.601 kb on - strand, within A4249_RS15295 at 3097.602 kb on + strand, within A4249_RS15295 at 3097.602 kb on + strand, within A4249_RS15295 at 3097.602 kb on + strand, within A4249_RS15295 at 3097.603 kb on - strand, within A4249_RS15295 at 3097.603 kb on - strand, within A4249_RS15295 at 3097.603 kb on - strand, within A4249_RS15295 at 3097.806 kb on + strand, within A4249_RS15295 at 3097.806 kb on + strand, within A4249_RS15295 at 3097.806 kb on + strand, within A4249_RS15295 at 3097.806 kb on + strand, within A4249_RS15295 at 3097.807 kb on - strand, within A4249_RS15295 at 3097.807 kb on - strand, within A4249_RS15295 at 3097.807 kb on - strand, within A4249_RS15295 at 3097.807 kb on - strand, within A4249_RS15295
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 3,093,855 + -0.2 3,093,855 + -0.7 3,093,855 + +0.0 3,093,855 + -0.3 3,093,855 + +0.5 3,093,855 + +1.1 3,093,855 + -2.7 3,093,855 + +0.5 3,093,855 + +0.3 3,093,855 + -0.2 3,093,856 - +0.4 3,093,856 - +0.4 3,093,930 + +0.5 3,093,930 + -0.1 3,093,930 + -0.9 3,093,930 + +0.5 3,093,931 - -0.7 3,093,931 - +0.4 3,093,931 - -0.3 3,093,935 + +0.4 3,093,935 + +0.4 3,093,935 + -0.3 3,093,936 - +0.4 3,094,037 + -0.0 3,094,083 - A4249_RS16830 0.18 -0.4 3,094,151 + A4249_RS16830 0.65 +0.7 3,094,152 - A4249_RS16830 0.65 +1.1 3,094,152 - A4249_RS16830 0.65 +0.6 3,094,156 + A4249_RS16830 0.68 -0.3 3,094,157 - A4249_RS16830 0.69 +0.2 3,094,498 + A4249_RS15285 0.74 -0.2 3,094,498 + A4249_RS15285 0.74 +0.2 3,094,499 - A4249_RS15285 0.74 +0.1 3,094,499 - A4249_RS15285 0.74 -0.5 3,094,499 - A4249_RS15285 0.74 -0.1 3,094,499 - A4249_RS15285 0.74 -1.0 3,094,499 - A4249_RS15285 0.74 +0.4 3,094,499 - A4249_RS15285 0.74 -1.2 3,094,499 - A4249_RS15285 0.74 -0.9 3,094,633 + -0.3 3,094,645 + +0.1 3,094,645 + -0.4 3,094,645 + +0.1 3,094,645 + +0.1 3,094,646 - -0.7 3,094,646 - +0.0 3,094,715 + +0.4 3,094,715 + +0.5 3,094,715 + -1.2 3,094,715 + -0.3 3,094,716 - -0.1 3,094,716 - +0.0 3,094,716 - -0.6 3,094,716 - +0.9 3,094,716 - +0.2 3,094,716 - +0.0 3,094,716 - -0.1 3,094,894 + +0.2 3,094,894 + -2.1 3,094,894 + -0.4 3,094,894 + -1.2 3,094,894 + -0.4 3,094,895 - +0.1 3,094,895 - -1.8 3,094,895 - -0.1 3,094,895 - +0.0 3,094,895 - -1.5 3,094,895 - +0.2 3,094,895 - -0.8 3,094,895 - +0.1 3,094,895 - -0.0 3,094,895 - +0.5 3,094,895 - +0.0 3,094,895 - +0.6 3,094,895 - +0.6 3,095,049 + A4249_RS15290 0.10 -0.6 3,095,049 + A4249_RS15290 0.10 +0.2 3,095,049 + A4249_RS15290 0.10 -0.4 3,095,049 + A4249_RS15290 0.10 -1.1 3,095,049 + A4249_RS15290 0.10 -0.8 3,095,050 - A4249_RS15290 0.11 -0.5 3,095,050 - A4249_RS15290 0.11 +0.1 3,095,050 - A4249_RS15290 0.11 -0.1 3,095,050 - A4249_RS15290 0.11 -0.9 3,095,091 + A4249_RS15290 0.12 -1.7 3,095,238 + A4249_RS15290 0.19 +0.1 3,095,238 + A4249_RS15290 0.19 +0.1 3,095,239 - A4249_RS15290 0.19 +0.2 3,095,239 - A4249_RS15290 0.19 +0.0 3,095,239 - A4249_RS15290 0.19 -0.2 3,095,239 - A4249_RS15290 0.19 +0.2 3,095,239 - A4249_RS15290 0.19 +0.1 3,095,239 - A4249_RS15290 0.19 +0.2 3,095,239 - A4249_RS15290 0.19 -0.6 3,095,239 - A4249_RS15290 0.19 -0.2 3,095,251 - A4249_RS15290 0.20 +0.6 3,095,251 - A4249_RS15290 0.20 +0.0 3,095,293 - A4249_RS15290 0.22 -0.2 3,095,293 - A4249_RS15290 0.22 +0.3 3,095,293 - A4249_RS15290 0.22 -0.1 3,095,375 + A4249_RS15290 0.26 +0.7 3,095,398 + A4249_RS15290 0.27 -0.5 3,095,398 + A4249_RS15290 0.27 +0.2 3,095,399 - A4249_RS15290 0.27 +1.3 3,095,399 - A4249_RS15290 0.27 +0.4 3,095,656 - A4249_RS15290 0.39 -0.4 3,095,913 + A4249_RS15290 0.51 +0.2 3,095,913 + A4249_RS15290 0.51 -0.4 3,095,913 + A4249_RS15290 0.51 -0.8 3,095,913 + A4249_RS15290 0.51 -0.5 3,095,913 + A4249_RS15290 0.51 +0.0 3,095,913 + A4249_RS15290 0.51 -0.9 3,095,913 + A4249_RS15290 0.51 -0.1 3,095,913 + A4249_RS15290 0.51 +1.0 3,095,913 + A4249_RS15290 0.51 +0.5 3,095,914 - A4249_RS15290 0.51 +0.4 3,095,914 - A4249_RS15290 0.51 -0.3 3,095,914 - A4249_RS15290 0.51 -0.3 3,095,914 - A4249_RS15290 0.51 -0.6 3,095,914 - A4249_RS15290 0.51 -0.5 3,095,914 - A4249_RS15290 0.51 +0.2 3,095,914 - A4249_RS15290 0.51 +0.9 3,095,914 - A4249_RS15290 0.51 -0.2 3,095,914 - A4249_RS15290 0.51 +0.5 3,095,914 - A4249_RS15290 0.51 -0.7 3,095,918 + A4249_RS15290 0.51 +0.4 3,095,918 + A4249_RS15290 0.51 -1.4 3,095,918 + A4249_RS15290 0.51 -0.4 3,095,919 - A4249_RS15290 0.51 -0.5 3,095,919 - A4249_RS15290 0.51 -1.4 3,095,919 - A4249_RS15290 0.51 +0.8 3,095,919 - A4249_RS15290 0.51 +0.5 3,095,919 - A4249_RS15290 0.51 -1.2 3,095,964 + A4249_RS15290 0.53 -0.8 3,095,964 + A4249_RS15290 0.53 -1.4 3,095,964 + A4249_RS15290 0.53 -2.4 3,095,965 - A4249_RS15290 0.53 -3.0 3,095,965 - A4249_RS15290 0.53 +0.1 3,096,258 + A4249_RS15290 0.67 +0.8 3,096,258 + A4249_RS15290 0.67 -0.5 3,096,259 - A4249_RS15290 0.67 -0.1 3,096,259 - A4249_RS15290 0.67 -1.4 3,096,259 - A4249_RS15290 0.67 +1.8 3,096,259 - A4249_RS15290 0.67 -0.2 3,096,447 + A4249_RS15290 0.76 -0.3 3,096,447 + A4249_RS15290 0.76 -0.0 3,096,447 + A4249_RS15290 0.76 +0.3 3,096,448 - A4249_RS15290 0.76 -0.0 3,096,448 - A4249_RS15290 0.76 -0.2 3,096,448 - A4249_RS15290 0.76 +0.7 3,096,448 - A4249_RS15290 0.76 +0.3 3,096,518 - A4249_RS15290 0.79 +0.3 3,096,518 - A4249_RS15290 0.79 +0.3 3,096,518 - A4249_RS15290 0.79 -0.4 3,096,598 + A4249_RS15290 0.83 -0.7 3,096,598 + A4249_RS15290 0.83 -0.5 3,096,598 + A4249_RS15290 0.83 -0.9 3,096,599 - A4249_RS15290 0.83 -0.3 3,096,599 - A4249_RS15290 0.83 +0.2 3,096,599 - A4249_RS15290 0.83 -0.1 3,096,606 + A4249_RS15290 0.83 +0.6 3,096,606 + A4249_RS15290 0.83 -0.1 3,096,606 + A4249_RS15290 0.83 +1.4 3,096,606 + A4249_RS15290 0.83 +0.1 3,096,607 - A4249_RS15290 0.83 -0.7 3,096,607 - A4249_RS15290 0.83 +0.1 3,096,607 - A4249_RS15290 0.83 +0.4 3,096,607 - A4249_RS15290 0.83 -0.5 3,096,607 - A4249_RS15290 0.83 -0.1 3,096,607 - A4249_RS15290 0.83 -0.2 3,096,713 + A4249_RS15290 0.88 -0.3 3,096,713 + A4249_RS15290 0.88 -0.5 3,096,743 + A4249_RS15290 0.89 -0.9 3,096,743 + A4249_RS15290 0.89 -0.9 3,096,743 + A4249_RS15290 0.89 +0.1 3,096,819 + +0.4 3,096,819 + -0.1 3,096,819 + -0.0 3,096,858 + -1.4 3,096,858 + -1.8 3,096,858 + +0.7 3,096,909 + +0.2 3,096,910 - -0.7 3,096,910 - -0.8 3,097,149 - A4249_RS15295 0.18 +0.5 3,097,221 + A4249_RS15295 0.25 -0.6 3,097,222 - A4249_RS15295 0.25 -0.7 3,097,289 + A4249_RS15295 0.32 -0.8 3,097,290 - A4249_RS15295 0.32 +0.8 3,097,290 - A4249_RS15295 0.32 +1.9 3,097,416 + A4249_RS15295 0.44 -0.5 3,097,417 - A4249_RS15295 0.44 +1.0 3,097,417 - A4249_RS15295 0.44 -1.0 3,097,600 + A4249_RS15295 0.61 -1.3 3,097,601 - A4249_RS15295 0.61 -1.5 3,097,601 - A4249_RS15295 0.61 +1.2 3,097,601 - A4249_RS15295 0.61 +1.0 3,097,601 - A4249_RS15295 0.61 -0.6 3,097,601 - A4249_RS15295 0.61 -0.8 3,097,602 + A4249_RS15295 0.62 +0.1 3,097,602 + A4249_RS15295 0.62 +0.6 3,097,602 + A4249_RS15295 0.62 -0.7 3,097,603 - A4249_RS15295 0.62 -0.3 3,097,603 - A4249_RS15295 0.62 +1.4 3,097,603 - A4249_RS15295 0.62 +0.3 3,097,806 + A4249_RS15295 0.81 +0.2 3,097,806 + A4249_RS15295 0.81 +0.2 3,097,806 + A4249_RS15295 0.81 -1.4 3,097,806 + A4249_RS15295 0.81 +0.4 3,097,807 - A4249_RS15295 0.81 -0.1 3,097,807 - A4249_RS15295 0.81 +0.3 3,097,807 - A4249_RS15295 0.81 -0.2 3,097,807 - A4249_RS15295 0.81 -0.4
Or see this region's nucleotide sequence