Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15060 and A4249_RS15065 are separated by 80 nucleotides A4249_RS15065 and A4249_RS15070 are separated by 44 nucleotides
A4249_RS15060: A4249_RS15060 - polyhydroxyalkanoate depolymerase, at 3,046,647 to 3,047,927
_RS15060
A4249_RS15065: A4249_RS15065 - SCO family protein, at 3,048,008 to 3,048,631
_RS15065
A4249_RS15070: A4249_RS15070 - ActS/PrrB/RegB family redox-sensitive histidine kinase, at 3,048,676 to 3,050,130
_RS15070
Position (kb)
3048
3049 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3047.026 kb on + strand, within A4249_RS15060 at 3047.026 kb on + strand, within A4249_RS15060 at 3047.027 kb on - strand, within A4249_RS15060 at 3047.027 kb on - strand, within A4249_RS15060 at 3047.027 kb on - strand, within A4249_RS15060 at 3047.093 kb on - strand, within A4249_RS15060 at 3047.093 kb on - strand, within A4249_RS15060 at 3047.093 kb on - strand, within A4249_RS15060 at 3047.093 kb on - strand, within A4249_RS15060 at 3047.093 kb on - strand, within A4249_RS15060 at 3047.143 kb on + strand, within A4249_RS15060 at 3047.144 kb on - strand, within A4249_RS15060 at 3047.144 kb on - strand, within A4249_RS15060 at 3047.188 kb on + strand, within A4249_RS15060 at 3047.446 kb on + strand, within A4249_RS15060 at 3047.446 kb on + strand, within A4249_RS15060 at 3047.446 kb on + strand, within A4249_RS15060 at 3047.446 kb on + strand, within A4249_RS15060 at 3047.447 kb on - strand, within A4249_RS15060 at 3047.512 kb on + strand, within A4249_RS15060 at 3047.512 kb on + strand, within A4249_RS15060 at 3047.512 kb on + strand, within A4249_RS15060 at 3047.512 kb on + strand, within A4249_RS15060 at 3047.512 kb on + strand, within A4249_RS15060 at 3047.512 kb on + strand, within A4249_RS15060 at 3047.512 kb on + strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.513 kb on - strand, within A4249_RS15060 at 3047.566 kb on + strand, within A4249_RS15060 at 3047.566 kb on + strand, within A4249_RS15060 at 3047.566 kb on + strand, within A4249_RS15060 at 3047.567 kb on - strand, within A4249_RS15060 at 3047.567 kb on - strand, within A4249_RS15060 at 3047.567 kb on - strand, within A4249_RS15060 at 3047.797 kb on + strand, within A4249_RS15060 at 3047.798 kb on - strand, within A4249_RS15060 at 3047.798 kb on - strand, within A4249_RS15060 at 3047.900 kb on - strand at 3047.920 kb on + strand at 3047.920 kb on + strand at 3047.920 kb on + strand at 3047.920 kb on + strand at 3047.921 kb on - strand at 3047.921 kb on - strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.969 kb on + strand at 3047.970 kb on - strand at 3047.970 kb on - strand at 3047.970 kb on - strand at 3047.970 kb on - strand at 3047.970 kb on - strand at 3047.970 kb on - strand at 3047.970 kb on - strand at 3047.970 kb on - strand at 3047.970 kb on - strand at 3047.970 kb on - strand at 3047.970 kb on - strand at 3047.970 kb on - strand at 3047.970 kb on - strand at 3047.970 kb on - strand at 3047.970 kb on - strand at 3047.970 kb on - strand at 3047.971 kb on + strand at 3047.971 kb on + strand at 3047.971 kb on + strand at 3047.971 kb on + strand at 3047.971 kb on + strand at 3047.971 kb on + strand at 3047.971 kb on + strand at 3047.971 kb on + strand at 3047.971 kb on + strand at 3047.971 kb on + strand at 3047.971 kb on + strand at 3047.971 kb on + strand at 3047.971 kb on - strand at 3047.972 kb on - strand at 3047.972 kb on - strand at 3047.972 kb on - strand at 3047.972 kb on - strand at 3047.972 kb on - strand at 3047.972 kb on - strand at 3047.972 kb on - strand at 3047.972 kb on - strand at 3047.972 kb on - strand at 3047.972 kb on - strand at 3047.972 kb on - strand at 3047.972 kb on - strand at 3047.972 kb on - strand at 3047.972 kb on - strand at 3047.972 kb on - strand at 3047.972 kb on - strand at 3047.995 kb on + strand at 3047.996 kb on - strand at 3047.996 kb on - strand at 3048.066 kb on + strand at 3048.108 kb on + strand, within A4249_RS15065 at 3048.108 kb on + strand, within A4249_RS15065 at 3048.109 kb on - strand, within A4249_RS15065 at 3048.109 kb on - strand, within A4249_RS15065 at 3048.109 kb on - strand, within A4249_RS15065 at 3048.133 kb on + strand, within A4249_RS15065 at 3048.133 kb on + strand, within A4249_RS15065 at 3048.133 kb on + strand, within A4249_RS15065 at 3048.133 kb on + strand, within A4249_RS15065 at 3048.133 kb on + strand, within A4249_RS15065 at 3048.135 kb on + strand, within A4249_RS15065 at 3048.135 kb on + strand, within A4249_RS15065 at 3048.135 kb on + strand, within A4249_RS15065 at 3048.135 kb on + strand, within A4249_RS15065 at 3048.136 kb on - strand, within A4249_RS15065 at 3048.136 kb on - strand, within A4249_RS15065 at 3048.162 kb on + strand, within A4249_RS15065 at 3048.162 kb on + strand, within A4249_RS15065 at 3048.162 kb on + strand, within A4249_RS15065 at 3048.163 kb on - strand, within A4249_RS15065 at 3048.255 kb on + strand, within A4249_RS15065 at 3048.255 kb on + strand, within A4249_RS15065 at 3048.255 kb on + strand, within A4249_RS15065 at 3048.255 kb on + strand, within A4249_RS15065 at 3048.255 kb on + strand, within A4249_RS15065 at 3048.256 kb on - strand, within A4249_RS15065 at 3048.256 kb on - strand, within A4249_RS15065 at 3048.393 kb on + strand, within A4249_RS15065 at 3048.393 kb on + strand, within A4249_RS15065 at 3048.393 kb on + strand, within A4249_RS15065 at 3048.393 kb on + strand, within A4249_RS15065 at 3048.393 kb on + strand, within A4249_RS15065 at 3048.393 kb on + strand, within A4249_RS15065 at 3048.393 kb on + strand, within A4249_RS15065 at 3048.664 kb on + strand at 3048.664 kb on + strand at 3048.664 kb on + strand at 3048.664 kb on + strand at 3048.664 kb on + strand at 3048.665 kb on - strand at 3048.665 kb on - strand at 3048.665 kb on - strand at 3048.666 kb on + strand at 3048.666 kb on + strand at 3048.666 kb on + strand at 3048.666 kb on + strand at 3048.666 kb on + strand at 3048.666 kb on + strand at 3048.666 kb on + strand at 3048.666 kb on + strand at 3048.666 kb on + strand at 3048.666 kb on + strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3048.667 kb on - strand at 3049.109 kb on + strand, within A4249_RS15070 at 3049.109 kb on + strand, within A4249_RS15070 at 3049.109 kb on + strand, within A4249_RS15070 at 3049.109 kb on + strand, within A4249_RS15070 at 3049.110 kb on - strand, within A4249_RS15070 at 3049.110 kb on - strand, within A4249_RS15070 at 3049.110 kb on - strand, within A4249_RS15070 at 3049.110 kb on - strand, within A4249_RS15070 at 3049.210 kb on + strand, within A4249_RS15070 at 3049.211 kb on - strand, within A4249_RS15070 at 3049.211 kb on - strand, within A4249_RS15070 at 3049.211 kb on - strand, within A4249_RS15070 at 3049.264 kb on + strand, within A4249_RS15070 at 3049.559 kb on - strand, within A4249_RS15070 at 3049.559 kb on - strand, within A4249_RS15070
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 3,047,026 + A4249_RS15060 0.30 +0.3 3,047,026 + A4249_RS15060 0.30 +0.1 3,047,027 - A4249_RS15060 0.30 -0.7 3,047,027 - A4249_RS15060 0.30 +0.7 3,047,027 - A4249_RS15060 0.30 +1.0 3,047,093 - A4249_RS15060 0.35 -0.8 3,047,093 - A4249_RS15060 0.35 -0.7 3,047,093 - A4249_RS15060 0.35 -0.1 3,047,093 - A4249_RS15060 0.35 -0.2 3,047,093 - A4249_RS15060 0.35 +0.6 3,047,143 + A4249_RS15060 0.39 +0.6 3,047,144 - A4249_RS15060 0.39 +1.1 3,047,144 - A4249_RS15060 0.39 +0.1 3,047,188 + A4249_RS15060 0.42 +0.3 3,047,446 + A4249_RS15060 0.62 +0.1 3,047,446 + A4249_RS15060 0.62 -1.4 3,047,446 + A4249_RS15060 0.62 -0.3 3,047,446 + A4249_RS15060 0.62 +0.3 3,047,447 - A4249_RS15060 0.62 +0.7 3,047,512 + A4249_RS15060 0.68 -1.2 3,047,512 + A4249_RS15060 0.68 -0.0 3,047,512 + A4249_RS15060 0.68 -0.5 3,047,512 + A4249_RS15060 0.68 +0.8 3,047,512 + A4249_RS15060 0.68 -0.1 3,047,512 + A4249_RS15060 0.68 -0.7 3,047,512 + A4249_RS15060 0.68 -0.9 3,047,513 - A4249_RS15060 0.68 -0.9 3,047,513 - A4249_RS15060 0.68 -0.7 3,047,513 - A4249_RS15060 0.68 +0.5 3,047,513 - A4249_RS15060 0.68 -0.6 3,047,513 - A4249_RS15060 0.68 -0.0 3,047,513 - A4249_RS15060 0.68 +0.5 3,047,513 - A4249_RS15060 0.68 +0.3 3,047,513 - A4249_RS15060 0.68 -0.3 3,047,566 + A4249_RS15060 0.72 -0.7 3,047,566 + A4249_RS15060 0.72 -0.2 3,047,566 + A4249_RS15060 0.72 +1.0 3,047,567 - A4249_RS15060 0.72 -0.4 3,047,567 - A4249_RS15060 0.72 -0.1 3,047,567 - A4249_RS15060 0.72 +0.0 3,047,797 + A4249_RS15060 0.90 -0.4 3,047,798 - A4249_RS15060 0.90 +0.9 3,047,798 - A4249_RS15060 0.90 +0.2 3,047,900 - -0.7 3,047,920 + -0.5 3,047,920 + +0.0 3,047,920 + -0.5 3,047,920 + +0.7 3,047,921 - -0.9 3,047,921 - -0.6 3,047,969 + -1.0 3,047,969 + +0.2 3,047,969 + +0.6 3,047,969 + -0.2 3,047,969 + +0.2 3,047,969 + -0.3 3,047,969 + -1.4 3,047,969 + +0.8 3,047,969 + +0.1 3,047,969 + +0.0 3,047,969 + -1.7 3,047,969 + +0.1 3,047,969 + -0.6 3,047,969 + -0.9 3,047,969 + +0.3 3,047,969 + -0.7 3,047,969 + +0.1 3,047,969 + +0.3 3,047,969 + +0.3 3,047,969 + -2.7 3,047,969 + +0.3 3,047,969 + +0.5 3,047,969 + +0.5 3,047,969 + -2.5 3,047,969 + +0.3 3,047,969 + -0.1 3,047,970 - -0.5 3,047,970 - -0.2 3,047,970 - -0.7 3,047,970 - -0.0 3,047,970 - -0.5 3,047,970 - +0.8 3,047,970 - -0.0 3,047,970 - +0.1 3,047,970 - -0.2 3,047,970 - -1.4 3,047,970 - +1.2 3,047,970 - +0.1 3,047,970 - +0.5 3,047,970 - +0.7 3,047,970 - +0.8 3,047,970 - -0.3 3,047,971 + +0.1 3,047,971 + +0.1 3,047,971 + -0.0 3,047,971 + +0.0 3,047,971 + +0.0 3,047,971 + +0.3 3,047,971 + +0.6 3,047,971 + +0.4 3,047,971 + -0.4 3,047,971 + +0.7 3,047,971 + -1.4 3,047,971 + +0.2 3,047,971 - -1.1 3,047,972 - +0.1 3,047,972 - +0.2 3,047,972 - +0.7 3,047,972 - +0.5 3,047,972 - +0.0 3,047,972 - +0.1 3,047,972 - +0.2 3,047,972 - -0.6 3,047,972 - -0.1 3,047,972 - -0.4 3,047,972 - -0.1 3,047,972 - -0.0 3,047,972 - +0.1 3,047,972 - -0.4 3,047,972 - +0.4 3,047,972 - -0.2 3,047,995 + -0.1 3,047,996 - +0.5 3,047,996 - +0.3 3,048,066 + -0.4 3,048,108 + A4249_RS15065 0.16 -0.2 3,048,108 + A4249_RS15065 0.16 -0.5 3,048,109 - A4249_RS15065 0.16 -0.1 3,048,109 - A4249_RS15065 0.16 -0.6 3,048,109 - A4249_RS15065 0.16 -0.5 3,048,133 + A4249_RS15065 0.20 -0.9 3,048,133 + A4249_RS15065 0.20 -0.5 3,048,133 + A4249_RS15065 0.20 -0.5 3,048,133 + A4249_RS15065 0.20 +0.1 3,048,133 + A4249_RS15065 0.20 -0.5 3,048,135 + A4249_RS15065 0.20 -0.2 3,048,135 + A4249_RS15065 0.20 -0.7 3,048,135 + A4249_RS15065 0.20 -0.2 3,048,135 + A4249_RS15065 0.20 -0.6 3,048,136 - A4249_RS15065 0.21 +0.3 3,048,136 - A4249_RS15065 0.21 -0.5 3,048,162 + A4249_RS15065 0.25 +0.1 3,048,162 + A4249_RS15065 0.25 -0.6 3,048,162 + A4249_RS15065 0.25 -0.3 3,048,163 - A4249_RS15065 0.25 -0.6 3,048,255 + A4249_RS15065 0.40 +1.0 3,048,255 + A4249_RS15065 0.40 -0.1 3,048,255 + A4249_RS15065 0.40 +0.8 3,048,255 + A4249_RS15065 0.40 +0.4 3,048,255 + A4249_RS15065 0.40 -0.6 3,048,256 - A4249_RS15065 0.40 +0.5 3,048,256 - A4249_RS15065 0.40 -0.5 3,048,393 + A4249_RS15065 0.62 +0.2 3,048,393 + A4249_RS15065 0.62 +0.0 3,048,393 + A4249_RS15065 0.62 +0.4 3,048,393 + A4249_RS15065 0.62 +0.0 3,048,393 + A4249_RS15065 0.62 -0.0 3,048,393 + A4249_RS15065 0.62 +0.3 3,048,393 + A4249_RS15065 0.62 -0.0 3,048,664 + -0.4 3,048,664 + -1.1 3,048,664 + -0.0 3,048,664 + -0.4 3,048,664 + +1.6 3,048,665 - -0.1 3,048,665 - -0.5 3,048,665 - +0.3 3,048,666 + +0.1 3,048,666 + +0.3 3,048,666 + -0.5 3,048,666 + +0.2 3,048,666 + +0.5 3,048,666 + -0.2 3,048,666 + -0.7 3,048,666 + -0.3 3,048,666 + +0.1 3,048,666 + -0.6 3,048,667 - -1.0 3,048,667 - -0.8 3,048,667 - -0.1 3,048,667 - +0.3 3,048,667 - +0.1 3,048,667 - -1.1 3,048,667 - +0.1 3,048,667 - -0.8 3,048,667 - -0.3 3,048,667 - -0.6 3,048,667 - +0.1 3,048,667 - -0.8 3,048,667 - +1.8 3,048,667 - +0.1 3,048,667 - -0.2 3,048,667 - +0.9 3,048,667 - -0.0 3,049,109 + A4249_RS15070 0.30 -0.3 3,049,109 + A4249_RS15070 0.30 -0.3 3,049,109 + A4249_RS15070 0.30 -0.5 3,049,109 + A4249_RS15070 0.30 -0.0 3,049,110 - A4249_RS15070 0.30 -0.3 3,049,110 - A4249_RS15070 0.30 -0.4 3,049,110 - A4249_RS15070 0.30 -0.2 3,049,110 - A4249_RS15070 0.30 -0.2 3,049,210 + A4249_RS15070 0.37 -0.1 3,049,211 - A4249_RS15070 0.37 -0.3 3,049,211 - A4249_RS15070 0.37 -0.0 3,049,211 - A4249_RS15070 0.37 +0.1 3,049,264 + A4249_RS15070 0.40 +0.0 3,049,559 - A4249_RS15070 0.61 -0.2 3,049,559 - A4249_RS15070 0.61 +0.2
Or see this region's nucleotide sequence