Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14950

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14940 and A4249_RS14945 are separated by 88 nucleotidesA4249_RS14945 and A4249_RS14950 overlap by 4 nucleotidesA4249_RS14950 and A4249_RS14955 are separated by 494 nucleotides A4249_RS14940: A4249_RS14940 - NAD(+) synthase, at 3,023,096 to 3,025,135 _RS14940 A4249_RS14945: A4249_RS14945 - type I methionyl aminopeptidase, at 3,025,224 to 3,025,991 _RS14945 A4249_RS14950: A4249_RS14950 - ParD-like family protein, at 3,025,988 to 3,026,200 _RS14950 A4249_RS14955: A4249_RS14955 - signal recognition particle-docking protein FtsY, at 3,026,695 to 3,027,630 _RS14955 Position (kb) 3025 3026 3027Strain fitness (log2 ratio) -2 -1 0 1 2at 3025.180 kb on + strandat 3025.180 kb on + strandat 3025.181 kb on - strandat 3025.181 kb on - strandat 3025.181 kb on - strandat 3025.181 kb on - strandat 3025.181 kb on - strandat 3025.181 kb on - strandat 3025.181 kb on - strandat 3025.181 kb on - strandat 3025.182 kb on + strandat 3025.182 kb on + strandat 3025.182 kb on + strandat 3025.182 kb on + strandat 3025.182 kb on + strandat 3025.182 kb on + strandat 3025.183 kb on - strandat 3025.183 kb on - strandat 3025.183 kb on - strandat 3025.225 kb on + strandat 3025.225 kb on + strandat 3025.225 kb on + strandat 3025.292 kb on + strandat 3025.292 kb on + strandat 3025.292 kb on + strandat 3025.292 kb on + strandat 3025.292 kb on + strandat 3025.292 kb on + strandat 3025.292 kb on + strandat 3025.292 kb on + strandat 3025.293 kb on - strandat 3025.293 kb on - strandat 3025.293 kb on - strandat 3025.517 kb on - strand, within A4249_RS14945at 3025.517 kb on - strand, within A4249_RS14945at 3025.534 kb on + strand, within A4249_RS14945at 3025.535 kb on - strand, within A4249_RS14945at 3025.535 kb on - strand, within A4249_RS14945at 3025.535 kb on - strand, within A4249_RS14945at 3025.535 kb on - strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.612 kb on + strand, within A4249_RS14945at 3025.613 kb on - strand, within A4249_RS14945at 3025.613 kb on - strand, within A4249_RS14945at 3025.613 kb on - strand, within A4249_RS14945at 3025.613 kb on - strand, within A4249_RS14945at 3025.613 kb on - strand, within A4249_RS14945at 3025.613 kb on - strand, within A4249_RS14945at 3025.613 kb on - strand, within A4249_RS14945at 3025.613 kb on - strand, within A4249_RS14945at 3025.658 kb on + strand, within A4249_RS14945at 3025.658 kb on + strand, within A4249_RS14945at 3025.663 kb on + strand, within A4249_RS14945at 3025.663 kb on + strand, within A4249_RS14945at 3025.663 kb on + strand, within A4249_RS14945at 3025.663 kb on + strand, within A4249_RS14945at 3025.664 kb on - strand, within A4249_RS14945at 3025.664 kb on - strand, within A4249_RS14945at 3025.664 kb on - strand, within A4249_RS14945at 3025.664 kb on - strand, within A4249_RS14945at 3025.664 kb on - strand, within A4249_RS14945at 3025.808 kb on - strand, within A4249_RS14945at 3025.808 kb on - strand, within A4249_RS14945at 3025.813 kb on + strand, within A4249_RS14945at 3025.813 kb on + strand, within A4249_RS14945at 3025.814 kb on - strand, within A4249_RS14945at 3025.814 kb on - strand, within A4249_RS14945at 3025.814 kb on - strand, within A4249_RS14945at 3025.814 kb on - strand, within A4249_RS14945at 3025.814 kb on - strand, within A4249_RS14945at 3025.842 kb on + strand, within A4249_RS14945at 3025.842 kb on + strand, within A4249_RS14945at 3025.843 kb on - strand, within A4249_RS14945at 3025.843 kb on - strand, within A4249_RS14945at 3026.136 kb on + strand, within A4249_RS14950at 3026.136 kb on + strand, within A4249_RS14950at 3026.137 kb on - strand, within A4249_RS14950at 3026.183 kb on + strandat 3026.183 kb on + strandat 3026.183 kb on + strandat 3026.183 kb on + strandat 3026.184 kb on - strandat 3026.184 kb on - strandat 3026.184 kb on - strandat 3026.184 kb on - strandat 3026.184 kb on - strandat 3026.184 kb on - strandat 3026.184 kb on - strandat 3026.184 kb on - strandat 3026.184 kb on - strandat 3026.184 kb on - strandat 3026.184 kb on - strandat 3026.201 kb on - strandat 3026.446 kb on - strandat 3026.491 kb on + strandat 3026.537 kb on + strandat 3026.538 kb on - strandat 3026.538 kb on - strandat 3026.538 kb on - strandat 3026.539 kb on + strandat 3026.540 kb on - strandat 3026.540 kb on - strandat 3026.540 kb on - strandat 3026.540 kb on - strandat 3026.602 kb on - strandat 3026.683 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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3,025,180 + +0.1
3,025,180 + +0.8
3,025,181 - -0.5
3,025,181 - +0.4
3,025,181 - -0.1
3,025,181 - +0.2
3,025,181 - -0.6
3,025,181 - -1.2
3,025,181 - -0.4
3,025,181 - +0.5
3,025,182 + -0.2
3,025,182 + -0.0
3,025,182 + -0.1
3,025,182 + +0.2
3,025,182 + -0.8
3,025,182 + +0.1
3,025,183 - -1.0
3,025,183 - -0.2
3,025,183 - +0.6
3,025,225 + -0.1
3,025,225 + +0.2
3,025,225 + +0.4
3,025,292 + -0.2
3,025,292 + -1.0
3,025,292 + +0.6
3,025,292 + -1.5
3,025,292 + +1.4
3,025,292 + -0.1
3,025,292 + -0.0
3,025,292 + -0.7
3,025,293 - -0.6
3,025,293 - -0.2
3,025,293 - +0.2
3,025,517 - A4249_RS14945 0.38 -2.7
3,025,517 - A4249_RS14945 0.38 -0.2
3,025,534 + A4249_RS14945 0.40 -0.2
3,025,535 - A4249_RS14945 0.40 +0.8
3,025,535 - A4249_RS14945 0.40 +0.1
3,025,535 - A4249_RS14945 0.40 -1.1
3,025,535 - A4249_RS14945 0.40 +0.8
3,025,612 + A4249_RS14945 0.51 +0.0
3,025,612 + A4249_RS14945 0.51 -0.2
3,025,612 + A4249_RS14945 0.51 +0.5
3,025,612 + A4249_RS14945 0.51 -0.6
3,025,612 + A4249_RS14945 0.51 -2.5
3,025,612 + A4249_RS14945 0.51 +0.3
3,025,612 + A4249_RS14945 0.51 -0.5
3,025,612 + A4249_RS14945 0.51 -1.7
3,025,612 + A4249_RS14945 0.51 -0.2
3,025,612 + A4249_RS14945 0.51 +0.7
3,025,612 + A4249_RS14945 0.51 -0.6
3,025,612 + A4249_RS14945 0.51 +1.1
3,025,612 + A4249_RS14945 0.51 +0.6
3,025,612 + A4249_RS14945 0.51 +0.1
3,025,612 + A4249_RS14945 0.51 +0.4
3,025,612 + A4249_RS14945 0.51 -0.2
3,025,612 + A4249_RS14945 0.51 +0.5
3,025,612 + A4249_RS14945 0.51 +1.1
3,025,613 - A4249_RS14945 0.51 +0.2
3,025,613 - A4249_RS14945 0.51 -0.4
3,025,613 - A4249_RS14945 0.51 +0.0
3,025,613 - A4249_RS14945 0.51 +0.2
3,025,613 - A4249_RS14945 0.51 -0.3
3,025,613 - A4249_RS14945 0.51 -0.7
3,025,613 - A4249_RS14945 0.51 +0.4
3,025,613 - A4249_RS14945 0.51 +0.1
3,025,658 + A4249_RS14945 0.57 +0.1
3,025,658 + A4249_RS14945 0.57 -0.2
3,025,663 + A4249_RS14945 0.57 -1.0
3,025,663 + A4249_RS14945 0.57 -0.2
3,025,663 + A4249_RS14945 0.57 +0.2
3,025,663 + A4249_RS14945 0.57 -0.5
3,025,664 - A4249_RS14945 0.57 +0.6
3,025,664 - A4249_RS14945 0.57 -1.1
3,025,664 - A4249_RS14945 0.57 +0.0
3,025,664 - A4249_RS14945 0.57 +0.2
3,025,664 - A4249_RS14945 0.57 +0.1
3,025,808 - A4249_RS14945 0.76 +0.1
3,025,808 - A4249_RS14945 0.76 +0.2
3,025,813 + A4249_RS14945 0.77 -0.3
3,025,813 + A4249_RS14945 0.77 +0.3
3,025,814 - A4249_RS14945 0.77 +0.1
3,025,814 - A4249_RS14945 0.77 -0.4
3,025,814 - A4249_RS14945 0.77 -1.5
3,025,814 - A4249_RS14945 0.77 -0.8
3,025,814 - A4249_RS14945 0.77 -0.6
3,025,842 + A4249_RS14945 0.80 -0.4
3,025,842 + A4249_RS14945 0.80 -1.4
3,025,843 - A4249_RS14945 0.81 +0.3
3,025,843 - A4249_RS14945 0.81 +1.2
3,026,136 + A4249_RS14950 0.69 -1.4
3,026,136 + A4249_RS14950 0.69 -0.4
3,026,137 - A4249_RS14950 0.70 -0.3
3,026,183 + +0.2
3,026,183 + -0.6
3,026,183 + +0.1
3,026,183 + -0.0
3,026,184 - -1.4
3,026,184 - +0.6
3,026,184 - +0.2
3,026,184 - +0.7
3,026,184 - -0.5
3,026,184 - -0.6
3,026,184 - +0.0
3,026,184 - +2.2
3,026,184 - +0.3
3,026,184 - +0.3
3,026,184 - -0.5
3,026,201 - +0.3
3,026,446 - +0.2
3,026,491 + +0.7
3,026,537 + +0.6
3,026,538 - -0.3
3,026,538 - -0.3
3,026,538 - +0.7
3,026,539 + +0.3
3,026,540 - +0.5
3,026,540 - +0.4
3,026,540 - -0.5
3,026,540 - +0.1
3,026,602 - -0.8
3,026,683 + -0.7

Or see this region's nucleotide sequence