Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14910

Experiment: Adenine 0.74 mM (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntA4249_RS14900 and A4249_RS14905 overlap by 4 nucleotidesA4249_RS14905 and A4249_RS14910 are separated by 106 nucleotidesA4249_RS14910 and A4249_RS14915 are separated by 229 nucleotides A4249_RS14900: A4249_RS14900 - phosphate/phosphite/phosphonate ABC transporter substrate-binding protein, at 3,015,198 to 3,016,214 _RS14900 A4249_RS14905: A4249_RS14905 - phosphonate ABC transporter ATP-binding protein, at 3,016,211 to 3,017,020 _RS14905 A4249_RS14910: A4249_RS14910 - DUF2254 domain-containing protein, at 3,017,127 to 3,018,356 _RS14910 A4249_RS14915: A4249_RS14915 - type III PLP-dependent enzyme, at 3,018,586 to 3,019,851 _RS14915 Position (kb) 3017 3018 3019Strain fitness (log2 ratio) -1 0 1 2at 3016.179 kb on + strandat 3016.179 kb on + strandat 3016.254 kb on + strandat 3016.255 kb on - strandat 3016.255 kb on - strandat 3016.302 kb on + strand, within A4249_RS14905at 3016.302 kb on + strand, within A4249_RS14905at 3016.303 kb on - strand, within A4249_RS14905at 3016.345 kb on - strand, within A4249_RS14905at 3016.497 kb on - strand, within A4249_RS14905at 3016.497 kb on - strand, within A4249_RS14905at 3016.566 kb on + strand, within A4249_RS14905at 3016.635 kb on - strand, within A4249_RS14905at 3016.635 kb on - strand, within A4249_RS14905at 3016.985 kb on + strandat 3016.986 kb on - strandat 3017.030 kb on - strandat 3017.030 kb on - strandat 3017.037 kb on + strandat 3017.038 kb on - strandat 3017.058 kb on + strandat 3017.058 kb on + strandat 3017.059 kb on - strandat 3017.059 kb on - strandat 3017.086 kb on + strandat 3017.087 kb on - strandat 3017.087 kb on - strandat 3017.087 kb on - strandat 3017.161 kb on + strandat 3017.162 kb on - strandat 3017.393 kb on + strand, within A4249_RS14910at 3017.393 kb on + strand, within A4249_RS14910at 3017.394 kb on - strand, within A4249_RS14910at 3017.426 kb on - strand, within A4249_RS14910at 3017.480 kb on + strand, within A4249_RS14910at 3017.480 kb on + strand, within A4249_RS14910at 3017.480 kb on + strand, within A4249_RS14910at 3017.480 kb on + strand, within A4249_RS14910at 3017.481 kb on - strand, within A4249_RS14910at 3017.481 kb on - strand, within A4249_RS14910at 3017.481 kb on - strand, within A4249_RS14910at 3017.548 kb on + strand, within A4249_RS14910at 3017.548 kb on + strand, within A4249_RS14910at 3017.548 kb on + strand, within A4249_RS14910at 3017.548 kb on + strand, within A4249_RS14910at 3017.549 kb on - strand, within A4249_RS14910at 3017.549 kb on - strand, within A4249_RS14910at 3017.549 kb on - strand, within A4249_RS14910at 3017.549 kb on - strand, within A4249_RS14910at 3017.549 kb on - strand, within A4249_RS14910at 3017.549 kb on - strand, within A4249_RS14910at 3017.549 kb on - strand, within A4249_RS14910at 3017.549 kb on - strand, within A4249_RS14910at 3017.549 kb on - strand, within A4249_RS14910at 3017.549 kb on - strand, within A4249_RS14910at 3017.549 kb on - strand, within A4249_RS14910at 3017.549 kb on - strand, within A4249_RS14910at 3017.980 kb on + strand, within A4249_RS14910at 3017.980 kb on + strand, within A4249_RS14910at 3017.980 kb on + strand, within A4249_RS14910at 3017.980 kb on + strand, within A4249_RS14910at 3017.980 kb on + strand, within A4249_RS14910at 3017.981 kb on - strand, within A4249_RS14910at 3017.981 kb on - strand, within A4249_RS14910at 3017.981 kb on - strand, within A4249_RS14910at 3017.983 kb on + strand, within A4249_RS14910at 3017.983 kb on + strand, within A4249_RS14910at 3017.983 kb on + strand, within A4249_RS14910at 3017.983 kb on + strand, within A4249_RS14910at 3017.983 kb on + strand, within A4249_RS14910at 3017.983 kb on + strand, within A4249_RS14910at 3017.983 kb on + strand, within A4249_RS14910at 3017.984 kb on - strand, within A4249_RS14910at 3017.984 kb on - strand, within A4249_RS14910at 3017.984 kb on - strand, within A4249_RS14910at 3017.984 kb on - strand, within A4249_RS14910at 3017.984 kb on - strand, within A4249_RS14910at 3018.019 kb on + strand, within A4249_RS14910at 3018.020 kb on - strand, within A4249_RS14910at 3018.119 kb on + strand, within A4249_RS14910at 3018.119 kb on + strand, within A4249_RS14910at 3018.119 kb on + strand, within A4249_RS14910at 3018.119 kb on + strand, within A4249_RS14910at 3018.119 kb on + strand, within A4249_RS14910at 3018.119 kb on + strand, within A4249_RS14910at 3018.119 kb on + strand, within A4249_RS14910at 3018.119 kb on + strand, within A4249_RS14910at 3018.119 kb on + strand, within A4249_RS14910at 3018.119 kb on + strand, within A4249_RS14910at 3018.119 kb on + strand, within A4249_RS14910at 3018.120 kb on - strand, within A4249_RS14910at 3018.120 kb on - strand, within A4249_RS14910at 3018.120 kb on - strand, within A4249_RS14910at 3018.120 kb on - strand, within A4249_RS14910at 3018.120 kb on - strand, within A4249_RS14910at 3018.120 kb on - strand, within A4249_RS14910at 3018.120 kb on - strand, within A4249_RS14910at 3018.120 kb on - strand, within A4249_RS14910at 3018.121 kb on + strand, within A4249_RS14910at 3018.121 kb on + strand, within A4249_RS14910at 3018.121 kb on + strand, within A4249_RS14910at 3018.293 kb on - strandat 3018.451 kb on + strandat 3018.451 kb on + strandat 3018.451 kb on + strandat 3018.452 kb on - strandat 3018.477 kb on + strandat 3018.477 kb on + strandat 3018.477 kb on + strandat 3018.477 kb on + strandat 3018.524 kb on + strandat 3018.524 kb on + strandat 3018.524 kb on + strandat 3018.567 kb on + strandat 3018.567 kb on + strandat 3018.567 kb on + strandat 3018.578 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
remove
3,016,179 + -1.2
3,016,179 + -0.2
3,016,254 + +0.3
3,016,255 - -0.7
3,016,255 - -0.7
3,016,302 + A4249_RS14905 0.11 +1.8
3,016,302 + A4249_RS14905 0.11 +0.2
3,016,303 - A4249_RS14905 0.11 -0.5
3,016,345 - A4249_RS14905 0.17 -0.1
3,016,497 - A4249_RS14905 0.35 +0.8
3,016,497 - A4249_RS14905 0.35 +1.3
3,016,566 + A4249_RS14905 0.44 +0.2
3,016,635 - A4249_RS14905 0.52 +0.5
3,016,635 - A4249_RS14905 0.52 -0.3
3,016,985 + +0.1
3,016,986 - -0.2
3,017,030 - -0.3
3,017,030 - -0.2
3,017,037 + +0.3
3,017,038 - -0.7
3,017,058 + +0.8
3,017,058 + +0.5
3,017,059 - +0.6
3,017,059 - +0.8
3,017,086 + +0.5
3,017,087 - -0.5
3,017,087 - -0.5
3,017,087 - +0.6
3,017,161 + -0.2
3,017,162 - -0.4
3,017,393 + A4249_RS14910 0.22 +0.5
3,017,393 + A4249_RS14910 0.22 +0.3
3,017,394 - A4249_RS14910 0.22 +0.0
3,017,426 - A4249_RS14910 0.24 -0.5
3,017,480 + A4249_RS14910 0.29 -0.2
3,017,480 + A4249_RS14910 0.29 +0.7
3,017,480 + A4249_RS14910 0.29 -0.8
3,017,480 + A4249_RS14910 0.29 -0.8
3,017,481 - A4249_RS14910 0.29 -0.1
3,017,481 - A4249_RS14910 0.29 +0.2
3,017,481 - A4249_RS14910 0.29 +0.1
3,017,548 + A4249_RS14910 0.34 -0.6
3,017,548 + A4249_RS14910 0.34 +0.5
3,017,548 + A4249_RS14910 0.34 +0.4
3,017,548 + A4249_RS14910 0.34 +0.8
3,017,549 - A4249_RS14910 0.34 +0.3
3,017,549 - A4249_RS14910 0.34 -0.1
3,017,549 - A4249_RS14910 0.34 +0.1
3,017,549 - A4249_RS14910 0.34 -1.1
3,017,549 - A4249_RS14910 0.34 +0.8
3,017,549 - A4249_RS14910 0.34 +0.5
3,017,549 - A4249_RS14910 0.34 -0.2
3,017,549 - A4249_RS14910 0.34 -0.3
3,017,549 - A4249_RS14910 0.34 +0.1
3,017,549 - A4249_RS14910 0.34 -0.2
3,017,549 - A4249_RS14910 0.34 +0.1
3,017,549 - A4249_RS14910 0.34 -0.3
3,017,980 + A4249_RS14910 0.69 +0.1
3,017,980 + A4249_RS14910 0.69 +0.1
3,017,980 + A4249_RS14910 0.69 -0.1
3,017,980 + A4249_RS14910 0.69 -0.5
3,017,980 + A4249_RS14910 0.69 -1.2
3,017,981 - A4249_RS14910 0.69 +0.1
3,017,981 - A4249_RS14910 0.69 +0.6
3,017,981 - A4249_RS14910 0.69 -0.6
3,017,983 + A4249_RS14910 0.70 -0.3
3,017,983 + A4249_RS14910 0.70 -0.4
3,017,983 + A4249_RS14910 0.70 -0.5
3,017,983 + A4249_RS14910 0.70 +0.8
3,017,983 + A4249_RS14910 0.70 +0.2
3,017,983 + A4249_RS14910 0.70 +0.4
3,017,983 + A4249_RS14910 0.70 -1.2
3,017,984 - A4249_RS14910 0.70 -0.0
3,017,984 - A4249_RS14910 0.70 -0.7
3,017,984 - A4249_RS14910 0.70 +0.4
3,017,984 - A4249_RS14910 0.70 +0.1
3,017,984 - A4249_RS14910 0.70 -0.4
3,018,019 + A4249_RS14910 0.73 +0.3
3,018,020 - A4249_RS14910 0.73 -0.4
3,018,119 + A4249_RS14910 0.81 +0.1
3,018,119 + A4249_RS14910 0.81 -0.7
3,018,119 + A4249_RS14910 0.81 -0.1
3,018,119 + A4249_RS14910 0.81 -1.0
3,018,119 + A4249_RS14910 0.81 +0.1
3,018,119 + A4249_RS14910 0.81 -0.1
3,018,119 + A4249_RS14910 0.81 -0.1
3,018,119 + A4249_RS14910 0.81 +0.1
3,018,119 + A4249_RS14910 0.81 -0.5
3,018,119 + A4249_RS14910 0.81 -0.6
3,018,119 + A4249_RS14910 0.81 -0.3
3,018,120 - A4249_RS14910 0.81 -0.1
3,018,120 - A4249_RS14910 0.81 +0.5
3,018,120 - A4249_RS14910 0.81 +0.1
3,018,120 - A4249_RS14910 0.81 +1.1
3,018,120 - A4249_RS14910 0.81 -0.2
3,018,120 - A4249_RS14910 0.81 -0.4
3,018,120 - A4249_RS14910 0.81 +0.6
3,018,120 - A4249_RS14910 0.81 -0.3
3,018,121 + A4249_RS14910 0.81 -0.1
3,018,121 + A4249_RS14910 0.81 -0.3
3,018,121 + A4249_RS14910 0.81 -0.4
3,018,293 - +0.7
3,018,451 + -0.9
3,018,451 + +0.0
3,018,451 + -0.3
3,018,452 - +1.4
3,018,477 + -0.0
3,018,477 + -1.0
3,018,477 + +0.3
3,018,477 + +1.1
3,018,524 + -0.2
3,018,524 + -0.1
3,018,524 + -0.5
3,018,567 + -1.4
3,018,567 + -1.1
3,018,567 + -0.6
3,018,578 + +0.6

Or see this region's nucleotide sequence