Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14680

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14670 and A4249_RS14675 are separated by 7 nucleotidesA4249_RS14675 and A4249_RS14680 are separated by 130 nucleotidesA4249_RS14680 and A4249_RS14685 overlap by 4 nucleotides A4249_RS14670: A4249_RS14670 - MarC family protein, at 2,971,255 to 2,971,950 _RS14670 A4249_RS14675: A4249_RS14675 - metallopeptidase family protein, at 2,971,958 to 2,972,356 _RS14675 A4249_RS14680: A4249_RS14680 - PAS domain-containing sensor histidine kinase, at 2,972,487 to 2,974,808 _RS14680 A4249_RS14685: A4249_RS14685 - M28 family metallopeptidase, at 2,974,805 to 2,976,451 _RS14685 Position (kb) 2972 2973 2974 2975Strain fitness (log2 ratio) -2 -1 0 1 2at 2971.926 kb on + strandat 2971.927 kb on - strandat 2971.949 kb on - strandat 2972.103 kb on + strand, within A4249_RS14675at 2972.172 kb on + strand, within A4249_RS14675at 2972.172 kb on + strand, within A4249_RS14675at 2972.172 kb on + strand, within A4249_RS14675at 2972.172 kb on + strand, within A4249_RS14675at 2972.172 kb on + strand, within A4249_RS14675at 2972.172 kb on + strand, within A4249_RS14675at 2972.172 kb on + strand, within A4249_RS14675at 2972.173 kb on - strand, within A4249_RS14675at 2972.173 kb on - strand, within A4249_RS14675at 2972.173 kb on - strand, within A4249_RS14675at 2972.173 kb on - strand, within A4249_RS14675at 2972.173 kb on - strand, within A4249_RS14675at 2972.183 kb on + strand, within A4249_RS14675at 2972.344 kb on + strandat 2972.345 kb on - strandat 2972.443 kb on + strandat 2972.443 kb on + strandat 2972.443 kb on + strandat 2972.444 kb on - strandat 2972.444 kb on - strandat 2972.444 kb on - strandat 2972.444 kb on - strandat 2972.444 kb on - strandat 2974.140 kb on + strand, within A4249_RS14680at 2974.140 kb on + strand, within A4249_RS14680at 2974.141 kb on - strand, within A4249_RS14680at 2974.141 kb on - strand, within A4249_RS14680at 2974.141 kb on - strand, within A4249_RS14680at 2974.596 kb on + strandat 2974.596 kb on + strandat 2974.597 kb on - strandat 2974.597 kb on - strandat 2974.597 kb on - strandat 2974.603 kb on + strandat 2974.603 kb on + strandat 2974.603 kb on + strandat 2974.806 kb on + strandat 2974.807 kb on - strandat 2974.908 kb on + strandat 2974.908 kb on + strandat 2974.908 kb on + strandat 2974.908 kb on + strandat 2974.909 kb on - strandat 2974.909 kb on - strandat 2974.995 kb on + strand, within A4249_RS14685at 2974.995 kb on + strand, within A4249_RS14685at 2974.995 kb on + strand, within A4249_RS14685at 2974.995 kb on + strand, within A4249_RS14685at 2974.995 kb on + strand, within A4249_RS14685at 2974.996 kb on - strand, within A4249_RS14685at 2975.088 kb on + strand, within A4249_RS14685at 2975.088 kb on + strand, within A4249_RS14685at 2975.088 kb on + strand, within A4249_RS14685at 2975.089 kb on - strand, within A4249_RS14685at 2975.089 kb on - strand, within A4249_RS14685at 2975.089 kb on - strand, within A4249_RS14685at 2975.089 kb on - strand, within A4249_RS14685at 2975.289 kb on + strand, within A4249_RS14685at 2975.289 kb on + strand, within A4249_RS14685at 2975.289 kb on + strand, within A4249_RS14685at 2975.290 kb on - strand, within A4249_RS14685at 2975.290 kb on - strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.431 kb on + strand, within A4249_RS14685at 2975.431 kb on + strand, within A4249_RS14685at 2975.432 kb on - strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.434 kb on - strand, within A4249_RS14685at 2975.434 kb on - strand, within A4249_RS14685at 2975.434 kb on - strand, within A4249_RS14685at 2975.434 kb on - strand, within A4249_RS14685at 2975.434 kb on - strand, within A4249_RS14685at 2975.434 kb on - strand, within A4249_RS14685at 2975.434 kb on - strand, within A4249_RS14685at 2975.472 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.784 kb on - strand, within A4249_RS14685at 2975.784 kb on - strand, within A4249_RS14685at 2975.784 kb on - strand, within A4249_RS14685at 2975.799 kb on + strand, within A4249_RS14685at 2975.799 kb on + strand, within A4249_RS14685at 2975.799 kb on + strand, within A4249_RS14685

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,971,926 + -1.0
2,971,927 - +1.0
2,971,949 - -0.5
2,972,103 + A4249_RS14675 0.36 -0.7
2,972,172 + A4249_RS14675 0.54 +0.5
2,972,172 + A4249_RS14675 0.54 -0.9
2,972,172 + A4249_RS14675 0.54 +0.8
2,972,172 + A4249_RS14675 0.54 -0.0
2,972,172 + A4249_RS14675 0.54 +0.8
2,972,172 + A4249_RS14675 0.54 +0.5
2,972,172 + A4249_RS14675 0.54 -0.4
2,972,173 - A4249_RS14675 0.54 +0.6
2,972,173 - A4249_RS14675 0.54 +0.6
2,972,173 - A4249_RS14675 0.54 -0.4
2,972,173 - A4249_RS14675 0.54 -0.6
2,972,173 - A4249_RS14675 0.54 -0.1
2,972,183 + A4249_RS14675 0.56 -0.2
2,972,344 + -0.3
2,972,345 - +0.0
2,972,443 + -0.0
2,972,443 + -0.3
2,972,443 + -0.4
2,972,444 - -0.7
2,972,444 - -0.1
2,972,444 - -0.3
2,972,444 - +0.2
2,972,444 - -0.7
2,974,140 + A4249_RS14680 0.71 +0.5
2,974,140 + A4249_RS14680 0.71 -1.3
2,974,141 - A4249_RS14680 0.71 +0.3
2,974,141 - A4249_RS14680 0.71 +0.2
2,974,141 - A4249_RS14680 0.71 +0.4
2,974,596 + +0.2
2,974,596 + -0.3
2,974,597 - +1.5
2,974,597 - -0.3
2,974,597 - -0.3
2,974,603 + -1.1
2,974,603 + -0.5
2,974,603 + -0.5
2,974,806 + +0.3
2,974,807 - +0.3
2,974,908 + +0.8
2,974,908 + -0.2
2,974,908 + +0.3
2,974,908 + -0.1
2,974,909 - -0.1
2,974,909 - +1.0
2,974,995 + A4249_RS14685 0.12 -0.3
2,974,995 + A4249_RS14685 0.12 +0.0
2,974,995 + A4249_RS14685 0.12 -0.0
2,974,995 + A4249_RS14685 0.12 +0.6
2,974,995 + A4249_RS14685 0.12 -0.3
2,974,996 - A4249_RS14685 0.12 +1.8
2,975,088 + A4249_RS14685 0.17 -0.5
2,975,088 + A4249_RS14685 0.17 -0.1
2,975,088 + A4249_RS14685 0.17 -1.2
2,975,089 - A4249_RS14685 0.17 -0.3
2,975,089 - A4249_RS14685 0.17 +0.1
2,975,089 - A4249_RS14685 0.17 -0.4
2,975,089 - A4249_RS14685 0.17 +0.4
2,975,289 + A4249_RS14685 0.29 +1.2
2,975,289 + A4249_RS14685 0.29 -1.6
2,975,289 + A4249_RS14685 0.29 +0.9
2,975,290 - A4249_RS14685 0.29 +1.0
2,975,290 - A4249_RS14685 0.29 +0.0
2,975,292 + A4249_RS14685 0.30 -0.5
2,975,292 + A4249_RS14685 0.30 -0.4
2,975,292 + A4249_RS14685 0.30 -0.1
2,975,292 + A4249_RS14685 0.30 -0.4
2,975,292 + A4249_RS14685 0.30 -0.1
2,975,292 + A4249_RS14685 0.30 +0.3
2,975,292 + A4249_RS14685 0.30 +0.3
2,975,292 + A4249_RS14685 0.30 -0.0
2,975,292 + A4249_RS14685 0.30 -0.9
2,975,293 - A4249_RS14685 0.30 +0.1
2,975,293 - A4249_RS14685 0.30 +0.1
2,975,293 - A4249_RS14685 0.30 +1.1
2,975,293 - A4249_RS14685 0.30 -0.0
2,975,293 - A4249_RS14685 0.30 -0.1
2,975,293 - A4249_RS14685 0.30 -1.1
2,975,293 - A4249_RS14685 0.30 -0.3
2,975,293 - A4249_RS14685 0.30 -0.4
2,975,293 - A4249_RS14685 0.30 -0.6
2,975,293 - A4249_RS14685 0.30 -0.4
2,975,293 - A4249_RS14685 0.30 +0.3
2,975,293 - A4249_RS14685 0.30 +0.6
2,975,293 - A4249_RS14685 0.30 -0.6
2,975,431 + A4249_RS14685 0.38 +0.5
2,975,431 + A4249_RS14685 0.38 -0.6
2,975,432 - A4249_RS14685 0.38 +0.7
2,975,433 + A4249_RS14685 0.38 -0.3
2,975,433 + A4249_RS14685 0.38 +0.7
2,975,433 + A4249_RS14685 0.38 +0.2
2,975,433 + A4249_RS14685 0.38 -0.2
2,975,433 + A4249_RS14685 0.38 +0.3
2,975,433 + A4249_RS14685 0.38 -0.2
2,975,433 + A4249_RS14685 0.38 +0.4
2,975,433 + A4249_RS14685 0.38 -0.7
2,975,433 + A4249_RS14685 0.38 +0.3
2,975,433 + A4249_RS14685 0.38 -0.2
2,975,433 + A4249_RS14685 0.38 +0.8
2,975,434 - A4249_RS14685 0.38 +0.7
2,975,434 - A4249_RS14685 0.38 -0.5
2,975,434 - A4249_RS14685 0.38 +0.4
2,975,434 - A4249_RS14685 0.38 -0.3
2,975,434 - A4249_RS14685 0.38 -0.8
2,975,434 - A4249_RS14685 0.38 +0.4
2,975,434 - A4249_RS14685 0.38 -0.1
2,975,472 + A4249_RS14685 0.40 +0.1
2,975,493 + A4249_RS14685 0.42 -0.3
2,975,493 + A4249_RS14685 0.42 +0.0
2,975,493 + A4249_RS14685 0.42 +0.1
2,975,493 + A4249_RS14685 0.42 -0.1
2,975,493 + A4249_RS14685 0.42 -0.7
2,975,493 + A4249_RS14685 0.42 -0.1
2,975,493 + A4249_RS14685 0.42 +0.5
2,975,493 + A4249_RS14685 0.42 -0.5
2,975,493 + A4249_RS14685 0.42 -0.1
2,975,494 - A4249_RS14685 0.42 +0.6
2,975,494 - A4249_RS14685 0.42 +0.6
2,975,494 - A4249_RS14685 0.42 -0.2
2,975,494 - A4249_RS14685 0.42 -0.6
2,975,494 - A4249_RS14685 0.42 +0.2
2,975,494 - A4249_RS14685 0.42 +0.1
2,975,494 - A4249_RS14685 0.42 +1.0
2,975,494 - A4249_RS14685 0.42 -0.4
2,975,494 - A4249_RS14685 0.42 +1.4
2,975,494 - A4249_RS14685 0.42 +0.1
2,975,494 - A4249_RS14685 0.42 +0.0
2,975,494 - A4249_RS14685 0.42 +1.2
2,975,784 - A4249_RS14685 0.59 +0.0
2,975,784 - A4249_RS14685 0.59 -0.2
2,975,784 - A4249_RS14685 0.59 -0.1
2,975,799 + A4249_RS14685 0.60 -0.5
2,975,799 + A4249_RS14685 0.60 -2.0
2,975,799 + A4249_RS14685 0.60 -0.5

Or see this region's nucleotide sequence