Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14600

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14590 and A4249_RS14595 are separated by 298 nucleotidesA4249_RS14595 and A4249_RS14600 are separated by 53 nucleotidesA4249_RS14600 and A4249_RS14605 are separated by 216 nucleotides A4249_RS14590: A4249_RS14590 - hypothetical protein, at 2,955,914 to 2,956,336 _RS14590 A4249_RS14595: A4249_RS14595 - co-chaperone GroES, at 2,956,635 to 2,956,922 _RS14595 A4249_RS14600: A4249_RS14600 - chaperonin GroEL, at 2,956,976 to 2,958,622 _RS14600 A4249_RS14605: A4249_RS14605 - glycosyltransferase family 2 protein, at 2,958,839 to 2,959,567 _RS14605 Position (kb) 2956 2957 2958 2959Strain fitness (log2 ratio) -2 -1 0 1at 2955.981 kb on + strand, within A4249_RS14590at 2956.065 kb on + strand, within A4249_RS14590at 2956.084 kb on - strand, within A4249_RS14590at 2956.086 kb on + strand, within A4249_RS14590at 2956.086 kb on + strand, within A4249_RS14590at 2956.087 kb on - strand, within A4249_RS14590at 2956.087 kb on - strand, within A4249_RS14590at 2956.087 kb on - strand, within A4249_RS14590at 2956.156 kb on + strand, within A4249_RS14590at 2956.158 kb on + strand, within A4249_RS14590at 2956.158 kb on + strand, within A4249_RS14590at 2956.158 kb on + strand, within A4249_RS14590at 2956.158 kb on + strand, within A4249_RS14590at 2956.158 kb on + strand, within A4249_RS14590at 2956.158 kb on + strand, within A4249_RS14590at 2956.158 kb on + strand, within A4249_RS14590at 2956.159 kb on - strand, within A4249_RS14590at 2956.159 kb on - strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.179 kb on + strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.180 kb on - strand, within A4249_RS14590at 2956.407 kb on - strandat 2956.407 kb on - strandat 2956.407 kb on - strandat 2958.621 kb on - strandat 2958.621 kb on - strandat 2958.694 kb on + strandat 2958.694 kb on + strandat 2958.694 kb on + strandat 2958.694 kb on + strandat 2958.694 kb on + strandat 2958.695 kb on - strandat 2958.695 kb on - strandat 2958.840 kb on + strandat 2958.840 kb on + strandat 2958.840 kb on + strandat 2958.840 kb on + strandat 2958.840 kb on + strandat 2958.841 kb on - strandat 2958.841 kb on - strandat 2958.841 kb on - strandat 2958.841 kb on - strandat 2958.841 kb on - strandat 2958.841 kb on - strandat 2958.841 kb on - strandat 2958.939 kb on + strand, within A4249_RS14605at 2958.939 kb on + strand, within A4249_RS14605at 2958.940 kb on - strand, within A4249_RS14605at 2958.940 kb on - strand, within A4249_RS14605at 2958.940 kb on - strand, within A4249_RS14605at 2958.984 kb on + strand, within A4249_RS14605at 2958.985 kb on - strand, within A4249_RS14605at 2958.985 kb on - strand, within A4249_RS14605at 2958.985 kb on - strand, within A4249_RS14605at 2958.985 kb on - strand, within A4249_RS14605at 2959.047 kb on + strand, within A4249_RS14605at 2959.047 kb on + strand, within A4249_RS14605at 2959.047 kb on + strand, within A4249_RS14605at 2959.048 kb on - strand, within A4249_RS14605at 2959.458 kb on + strand, within A4249_RS14605at 2959.459 kb on - strand, within A4249_RS14605at 2959.459 kb on - strand, within A4249_RS14605at 2959.578 kb on + strandat 2959.578 kb on + strandat 2959.579 kb on - strandat 2959.579 kb on - strandat 2959.579 kb on - strandat 2959.620 kb on + strandat 2959.621 kb on - strandat 2959.621 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,955,981 + A4249_RS14590 0.16 +0.5
2,956,065 + A4249_RS14590 0.36 -0.7
2,956,084 - A4249_RS14590 0.40 +0.4
2,956,086 + A4249_RS14590 0.41 +0.2
2,956,086 + A4249_RS14590 0.41 +0.4
2,956,087 - A4249_RS14590 0.41 -0.4
2,956,087 - A4249_RS14590 0.41 +0.1
2,956,087 - A4249_RS14590 0.41 -0.1
2,956,156 + A4249_RS14590 0.57 +0.7
2,956,158 + A4249_RS14590 0.58 -1.5
2,956,158 + A4249_RS14590 0.58 -1.1
2,956,158 + A4249_RS14590 0.58 +1.0
2,956,158 + A4249_RS14590 0.58 +0.0
2,956,158 + A4249_RS14590 0.58 +0.3
2,956,158 + A4249_RS14590 0.58 +1.0
2,956,158 + A4249_RS14590 0.58 -1.2
2,956,159 - A4249_RS14590 0.58 -0.7
2,956,159 - A4249_RS14590 0.58 +0.1
2,956,179 + A4249_RS14590 0.63 +0.2
2,956,179 + A4249_RS14590 0.63 -0.8
2,956,179 + A4249_RS14590 0.63 +0.5
2,956,179 + A4249_RS14590 0.63 +0.3
2,956,179 + A4249_RS14590 0.63 +0.4
2,956,179 + A4249_RS14590 0.63 -0.3
2,956,179 + A4249_RS14590 0.63 +0.9
2,956,179 + A4249_RS14590 0.63 -1.4
2,956,180 - A4249_RS14590 0.63 -0.6
2,956,180 - A4249_RS14590 0.63 -0.1
2,956,180 - A4249_RS14590 0.63 -0.4
2,956,180 - A4249_RS14590 0.63 -0.2
2,956,180 - A4249_RS14590 0.63 +0.2
2,956,180 - A4249_RS14590 0.63 +1.0
2,956,180 - A4249_RS14590 0.63 -0.4
2,956,180 - A4249_RS14590 0.63 +0.2
2,956,180 - A4249_RS14590 0.63 +0.4
2,956,407 - -0.3
2,956,407 - -0.4
2,956,407 - -0.4
2,958,621 - +0.5
2,958,621 - -1.2
2,958,694 + -1.7
2,958,694 + -0.9
2,958,694 + +0.2
2,958,694 + -0.2
2,958,694 + -0.5
2,958,695 - -0.3
2,958,695 - -0.2
2,958,840 + -0.1
2,958,840 + -0.2
2,958,840 + -0.3
2,958,840 + -0.1
2,958,840 + -0.0
2,958,841 - +0.0
2,958,841 - -0.2
2,958,841 - -0.2
2,958,841 - -0.4
2,958,841 - -0.1
2,958,841 - -0.2
2,958,841 - +0.4
2,958,939 + A4249_RS14605 0.14 -0.5
2,958,939 + A4249_RS14605 0.14 -0.6
2,958,940 - A4249_RS14605 0.14 -0.7
2,958,940 - A4249_RS14605 0.14 +0.6
2,958,940 - A4249_RS14605 0.14 -0.7
2,958,984 + A4249_RS14605 0.20 -0.2
2,958,985 - A4249_RS14605 0.20 -1.3
2,958,985 - A4249_RS14605 0.20 -1.8
2,958,985 - A4249_RS14605 0.20 -0.2
2,958,985 - A4249_RS14605 0.20 +0.3
2,959,047 + A4249_RS14605 0.29 -0.1
2,959,047 + A4249_RS14605 0.29 +0.6
2,959,047 + A4249_RS14605 0.29 +0.0
2,959,048 - A4249_RS14605 0.29 +0.3
2,959,458 + A4249_RS14605 0.85 -0.8
2,959,459 - A4249_RS14605 0.85 +0.1
2,959,459 - A4249_RS14605 0.85 -0.5
2,959,578 + +0.0
2,959,578 + +0.0
2,959,579 - -0.3
2,959,579 - +0.2
2,959,579 - +0.2
2,959,620 + +0.8
2,959,621 - +0.9
2,959,621 - -1.9

Or see this region's nucleotide sequence