Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14370 and A4249_RS14375 are separated by 318 nucleotides A4249_RS14375 and A4249_RS14380 are separated by 77 nucleotides A4249_RS14380 and A4249_RS14385 are separated by 33 nucleotides A4249_RS14385 and A4249_RS14390 are separated by 70 nucleotides
A4249_RS14370: A4249_RS14370 - M23 family metallopeptidase, at 2,902,640 to 2,903,995
_RS14370
A4249_RS14375: A4249_RS14375 - YdbH domain-containing protein, at 2,904,314 to 2,907,511
_RS14375
A4249_RS14380: A4249_RS14380 - YnbE family lipoprotein, at 2,907,589 to 2,907,777
_RS14380
A4249_RS14385: A4249_RS14385 - DUF1318 domain-containing protein, at 2,907,811 to 2,908,170
_RS14385
A4249_RS14390: A4249_RS14390 - DNA cytosine methyltransferase, at 2,908,241 to 2,909,371
_RS14390
Position (kb)
2904
2905
2906
2907
2908 Strain fitness (log2 ratio)
-2
-1
0
1 at 2903.895 kb on + strand at 2903.896 kb on - strand at 2903.896 kb on - strand at 2903.896 kb on - strand at 2903.896 kb on - strand at 2904.008 kb on + strand at 2904.008 kb on + strand at 2904.009 kb on - strand at 2904.036 kb on + strand at 2904.036 kb on + strand at 2904.036 kb on + strand at 2904.037 kb on - strand at 2904.086 kb on + strand at 2904.086 kb on + strand at 2904.087 kb on - strand at 2904.087 kb on - strand at 2904.087 kb on - strand at 2904.087 kb on - strand at 2904.088 kb on + strand at 2904.122 kb on + strand at 2904.189 kb on + strand at 2904.431 kb on + strand at 2904.432 kb on - strand at 2904.602 kb on + strand at 2904.603 kb on - strand at 2904.821 kb on + strand, within A4249_RS14375 at 2904.822 kb on - strand, within A4249_RS14375 at 2904.822 kb on - strand, within A4249_RS14375 at 2905.509 kb on - strand, within A4249_RS14375 at 2905.509 kb on - strand, within A4249_RS14375 at 2905.509 kb on - strand, within A4249_RS14375 at 2905.509 kb on - strand, within A4249_RS14375 at 2905.509 kb on - strand, within A4249_RS14375 at 2905.826 kb on + strand, within A4249_RS14375 at 2905.827 kb on - strand, within A4249_RS14375 at 2905.827 kb on - strand, within A4249_RS14375 at 2906.048 kb on + strand, within A4249_RS14375 at 2906.048 kb on + strand, within A4249_RS14375 at 2906.048 kb on + strand, within A4249_RS14375 at 2906.048 kb on + strand, within A4249_RS14375 at 2906.048 kb on + strand, within A4249_RS14375 at 2906.048 kb on + strand, within A4249_RS14375 at 2906.048 kb on + strand, within A4249_RS14375 at 2906.048 kb on + strand, within A4249_RS14375 at 2906.048 kb on + strand, within A4249_RS14375 at 2906.048 kb on + strand, within A4249_RS14375 at 2906.049 kb on - strand, within A4249_RS14375 at 2906.049 kb on - strand, within A4249_RS14375 at 2906.049 kb on - strand, within A4249_RS14375 at 2906.049 kb on - strand, within A4249_RS14375 at 2906.049 kb on - strand, within A4249_RS14375 at 2906.049 kb on - strand, within A4249_RS14375 at 2906.049 kb on - strand, within A4249_RS14375 at 2906.049 kb on - strand, within A4249_RS14375 at 2906.049 kb on - strand, within A4249_RS14375 at 2906.329 kb on + strand, within A4249_RS14375 at 2906.329 kb on + strand, within A4249_RS14375 at 2906.329 kb on + strand, within A4249_RS14375 at 2906.329 kb on + strand, within A4249_RS14375 at 2906.330 kb on - strand, within A4249_RS14375 at 2906.330 kb on - strand, within A4249_RS14375 at 2906.435 kb on + strand, within A4249_RS14375 at 2906.435 kb on + strand, within A4249_RS14375 at 2906.435 kb on + strand, within A4249_RS14375 at 2906.436 kb on - strand, within A4249_RS14375 at 2906.436 kb on - strand, within A4249_RS14375 at 2906.436 kb on - strand, within A4249_RS14375 at 2906.436 kb on - strand, within A4249_RS14375 at 2906.927 kb on + strand, within A4249_RS14375 at 2906.928 kb on - strand, within A4249_RS14375 at 2906.928 kb on - strand, within A4249_RS14375 at 2906.928 kb on - strand, within A4249_RS14375 at 2907.189 kb on - strand, within A4249_RS14375 at 2907.189 kb on - strand, within A4249_RS14375 at 2907.189 kb on - strand, within A4249_RS14375 at 2907.549 kb on + strand at 2907.549 kb on + strand at 2907.549 kb on + strand at 2907.549 kb on + strand at 2907.549 kb on + strand at 2907.549 kb on + strand at 2907.549 kb on + strand at 2907.549 kb on + strand at 2907.550 kb on - strand at 2907.550 kb on - strand at 2907.550 kb on - strand at 2907.550 kb on - strand at 2907.550 kb on - strand at 2907.552 kb on + strand at 2907.552 kb on + strand at 2907.552 kb on + strand at 2907.553 kb on - strand at 2907.553 kb on - strand at 2907.694 kb on + strand, within A4249_RS14380 at 2907.694 kb on + strand, within A4249_RS14380 at 2907.694 kb on + strand, within A4249_RS14380 at 2907.694 kb on + strand, within A4249_RS14380 at 2907.695 kb on - strand, within A4249_RS14380 at 2907.695 kb on - strand, within A4249_RS14380 at 2907.695 kb on - strand, within A4249_RS14380 at 2907.695 kb on - strand, within A4249_RS14380 at 2907.695 kb on - strand, within A4249_RS14380 at 2907.955 kb on + strand, within A4249_RS14385 at 2907.955 kb on + strand, within A4249_RS14385 at 2908.036 kb on + strand, within A4249_RS14385 at 2908.036 kb on + strand, within A4249_RS14385 at 2908.036 kb on + strand, within A4249_RS14385 at 2908.037 kb on - strand, within A4249_RS14385 at 2908.037 kb on - strand, within A4249_RS14385 at 2908.135 kb on + strand at 2908.168 kb on + strand at 2908.168 kb on + strand at 2908.169 kb on - strand at 2908.200 kb on + strand at 2908.218 kb on + strand at 2908.218 kb on + strand at 2908.219 kb on - strand at 2908.219 kb on - strand at 2908.219 kb on - strand at 2908.368 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.456 kb on - strand, within A4249_RS14390 at 2908.456 kb on - strand, within A4249_RS14390 at 2908.456 kb on - strand, within A4249_RS14390 at 2908.456 kb on - strand, within A4249_RS14390 at 2908.456 kb on - strand, within A4249_RS14390 at 2908.456 kb on - strand, within A4249_RS14390 at 2908.456 kb on - strand, within A4249_RS14390
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,903,895 + +0.1 2,903,896 - +0.0 2,903,896 - -0.0 2,903,896 - -0.1 2,903,896 - +0.2 2,904,008 + +0.7 2,904,008 + -1.0 2,904,009 - -0.2 2,904,036 + -0.9 2,904,036 + +0.1 2,904,036 + -0.1 2,904,037 - -0.4 2,904,086 + -0.2 2,904,086 + -0.2 2,904,087 - -0.3 2,904,087 - +0.0 2,904,087 - -0.1 2,904,087 - -0.2 2,904,088 + -0.6 2,904,122 + +0.0 2,904,189 + -0.3 2,904,431 + -0.5 2,904,432 - -0.1 2,904,602 + -0.2 2,904,603 - -0.3 2,904,821 + A4249_RS14375 0.16 +0.3 2,904,822 - A4249_RS14375 0.16 -0.3 2,904,822 - A4249_RS14375 0.16 -0.1 2,905,509 - A4249_RS14375 0.37 +0.4 2,905,509 - A4249_RS14375 0.37 +0.2 2,905,509 - A4249_RS14375 0.37 +0.2 2,905,509 - A4249_RS14375 0.37 +0.1 2,905,509 - A4249_RS14375 0.37 +0.4 2,905,826 + A4249_RS14375 0.47 +0.2 2,905,827 - A4249_RS14375 0.47 +0.1 2,905,827 - A4249_RS14375 0.47 -0.1 2,906,048 + A4249_RS14375 0.54 -0.8 2,906,048 + A4249_RS14375 0.54 -0.3 2,906,048 + A4249_RS14375 0.54 +0.2 2,906,048 + A4249_RS14375 0.54 -0.3 2,906,048 + A4249_RS14375 0.54 -0.6 2,906,048 + A4249_RS14375 0.54 -0.2 2,906,048 + A4249_RS14375 0.54 +0.2 2,906,048 + A4249_RS14375 0.54 -0.0 2,906,048 + A4249_RS14375 0.54 +0.1 2,906,048 + A4249_RS14375 0.54 -0.5 2,906,049 - A4249_RS14375 0.54 -0.3 2,906,049 - A4249_RS14375 0.54 -0.7 2,906,049 - A4249_RS14375 0.54 -0.1 2,906,049 - A4249_RS14375 0.54 +1.1 2,906,049 - A4249_RS14375 0.54 -0.6 2,906,049 - A4249_RS14375 0.54 +0.0 2,906,049 - A4249_RS14375 0.54 +0.7 2,906,049 - A4249_RS14375 0.54 -0.3 2,906,049 - A4249_RS14375 0.54 +0.9 2,906,329 + A4249_RS14375 0.63 -0.8 2,906,329 + A4249_RS14375 0.63 -0.4 2,906,329 + A4249_RS14375 0.63 -0.1 2,906,329 + A4249_RS14375 0.63 +0.6 2,906,330 - A4249_RS14375 0.63 +0.7 2,906,330 - A4249_RS14375 0.63 -0.4 2,906,435 + A4249_RS14375 0.66 -0.0 2,906,435 + A4249_RS14375 0.66 +0.1 2,906,435 + A4249_RS14375 0.66 +0.1 2,906,436 - A4249_RS14375 0.66 +0.7 2,906,436 - A4249_RS14375 0.66 +0.4 2,906,436 - A4249_RS14375 0.66 -0.5 2,906,436 - A4249_RS14375 0.66 +0.6 2,906,927 + A4249_RS14375 0.82 -0.5 2,906,928 - A4249_RS14375 0.82 -0.4 2,906,928 - A4249_RS14375 0.82 -0.4 2,906,928 - A4249_RS14375 0.82 -0.1 2,907,189 - A4249_RS14375 0.90 +0.2 2,907,189 - A4249_RS14375 0.90 -0.2 2,907,189 - A4249_RS14375 0.90 -0.2 2,907,549 + -0.8 2,907,549 + -0.1 2,907,549 + -0.4 2,907,549 + -0.4 2,907,549 + -0.9 2,907,549 + -1.0 2,907,549 + -0.1 2,907,549 + -0.8 2,907,550 - -0.5 2,907,550 - -0.1 2,907,550 - +0.7 2,907,550 - -0.4 2,907,550 - -0.4 2,907,552 + -0.1 2,907,552 + -0.1 2,907,552 + -0.3 2,907,553 - +0.4 2,907,553 - -0.7 2,907,694 + A4249_RS14380 0.56 -0.5 2,907,694 + A4249_RS14380 0.56 -0.4 2,907,694 + A4249_RS14380 0.56 +0.6 2,907,694 + A4249_RS14380 0.56 -0.2 2,907,695 - A4249_RS14380 0.56 -0.3 2,907,695 - A4249_RS14380 0.56 -0.3 2,907,695 - A4249_RS14380 0.56 +0.0 2,907,695 - A4249_RS14380 0.56 +0.0 2,907,695 - A4249_RS14380 0.56 +0.4 2,907,955 + A4249_RS14385 0.40 -0.7 2,907,955 + A4249_RS14385 0.40 -0.2 2,908,036 + A4249_RS14385 0.62 -0.6 2,908,036 + A4249_RS14385 0.62 -0.1 2,908,036 + A4249_RS14385 0.62 +0.4 2,908,037 - A4249_RS14385 0.63 +0.3 2,908,037 - A4249_RS14385 0.63 +0.1 2,908,135 + -0.1 2,908,168 + -0.4 2,908,168 + -0.2 2,908,169 - -0.3 2,908,200 + +0.0 2,908,218 + -0.5 2,908,218 + +0.6 2,908,219 - +0.2 2,908,219 - -1.1 2,908,219 - -1.5 2,908,368 + A4249_RS14390 0.11 -0.8 2,908,455 + A4249_RS14390 0.19 +0.6 2,908,455 + A4249_RS14390 0.19 -0.2 2,908,455 + A4249_RS14390 0.19 +0.1 2,908,455 + A4249_RS14390 0.19 +0.2 2,908,455 + A4249_RS14390 0.19 -0.1 2,908,455 + A4249_RS14390 0.19 +0.6 2,908,455 + A4249_RS14390 0.19 +1.4 2,908,455 + A4249_RS14390 0.19 -0.5 2,908,455 + A4249_RS14390 0.19 -0.7 2,908,456 - A4249_RS14390 0.19 -0.1 2,908,456 - A4249_RS14390 0.19 +0.2 2,908,456 - A4249_RS14390 0.19 +0.2 2,908,456 - A4249_RS14390 0.19 -1.8 2,908,456 - A4249_RS14390 0.19 +0.1 2,908,456 - A4249_RS14390 0.19 +0.6 2,908,456 - A4249_RS14390 0.19 -2.1
Or see this region's nucleotide sequence