Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14370

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14365 and A4249_RS14370 are separated by 3 nucleotidesA4249_RS14370 and A4249_RS14375 are separated by 318 nucleotides A4249_RS14365: A4249_RS14365 - TadG family pilus assembly protein, at 2,900,960 to 2,902,636 _RS14365 A4249_RS14370: A4249_RS14370 - M23 family metallopeptidase, at 2,902,640 to 2,903,995 _RS14370 A4249_RS14375: A4249_RS14375 - YdbH domain-containing protein, at 2,904,314 to 2,907,511 _RS14375 Position (kb) 2902 2903 2904Strain fitness (log2 ratio) -1 0 1 2at 2901.928 kb on + strand, within A4249_RS14365at 2901.928 kb on + strand, within A4249_RS14365at 2902.022 kb on + strand, within A4249_RS14365at 2902.022 kb on + strand, within A4249_RS14365at 2902.022 kb on + strand, within A4249_RS14365at 2902.022 kb on + strand, within A4249_RS14365at 2902.023 kb on - strand, within A4249_RS14365at 2902.023 kb on - strand, within A4249_RS14365at 2902.023 kb on - strand, within A4249_RS14365at 2902.023 kb on - strand, within A4249_RS14365at 2902.023 kb on - strand, within A4249_RS14365at 2902.023 kb on - strand, within A4249_RS14365at 2902.023 kb on - strand, within A4249_RS14365at 2902.074 kb on + strand, within A4249_RS14365at 2902.075 kb on - strand, within A4249_RS14365at 2902.326 kb on + strand, within A4249_RS14365at 2902.327 kb on - strand, within A4249_RS14365at 2902.327 kb on - strand, within A4249_RS14365at 2902.327 kb on - strand, within A4249_RS14365at 2902.449 kb on + strand, within A4249_RS14365at 2902.450 kb on - strand, within A4249_RS14365at 2902.641 kb on + strandat 2902.836 kb on + strand, within A4249_RS14370at 2902.836 kb on + strand, within A4249_RS14370at 2902.836 kb on + strand, within A4249_RS14370at 2902.836 kb on + strand, within A4249_RS14370at 2902.837 kb on - strand, within A4249_RS14370at 2902.837 kb on - strand, within A4249_RS14370at 2902.837 kb on - strand, within A4249_RS14370at 2902.837 kb on - strand, within A4249_RS14370at 2902.837 kb on - strand, within A4249_RS14370at 2902.837 kb on - strand, within A4249_RS14370at 2902.999 kb on - strand, within A4249_RS14370at 2903.101 kb on - strand, within A4249_RS14370at 2903.101 kb on - strand, within A4249_RS14370at 2903.247 kb on + strand, within A4249_RS14370at 2903.247 kb on + strand, within A4249_RS14370at 2903.247 kb on + strand, within A4249_RS14370at 2903.247 kb on + strand, within A4249_RS14370at 2903.247 kb on + strand, within A4249_RS14370at 2903.247 kb on + strand, within A4249_RS14370at 2903.248 kb on - strand, within A4249_RS14370at 2903.248 kb on - strand, within A4249_RS14370at 2903.248 kb on - strand, within A4249_RS14370at 2903.274 kb on + strand, within A4249_RS14370at 2903.274 kb on + strand, within A4249_RS14370at 2903.274 kb on + strand, within A4249_RS14370at 2903.275 kb on - strand, within A4249_RS14370at 2903.275 kb on - strand, within A4249_RS14370at 2903.275 kb on - strand, within A4249_RS14370at 2903.275 kb on - strand, within A4249_RS14370at 2903.275 kb on - strand, within A4249_RS14370at 2903.275 kb on - strand, within A4249_RS14370at 2903.895 kb on + strandat 2903.896 kb on - strandat 2903.896 kb on - strandat 2903.896 kb on - strandat 2903.896 kb on - strandat 2904.008 kb on + strandat 2904.008 kb on + strandat 2904.009 kb on - strandat 2904.036 kb on + strandat 2904.036 kb on + strandat 2904.036 kb on + strandat 2904.037 kb on - strandat 2904.086 kb on + strandat 2904.086 kb on + strandat 2904.087 kb on - strandat 2904.087 kb on - strandat 2904.087 kb on - strandat 2904.087 kb on - strandat 2904.088 kb on + strandat 2904.122 kb on + strandat 2904.189 kb on + strandat 2904.431 kb on + strandat 2904.432 kb on - strandat 2904.602 kb on + strandat 2904.603 kb on - strandat 2904.821 kb on + strand, within A4249_RS14375at 2904.822 kb on - strand, within A4249_RS14375at 2904.822 kb on - strand, within A4249_RS14375

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,901,928 + A4249_RS14365 0.58 -0.3
2,901,928 + A4249_RS14365 0.58 -0.5
2,902,022 + A4249_RS14365 0.63 -0.3
2,902,022 + A4249_RS14365 0.63 -0.1
2,902,022 + A4249_RS14365 0.63 -1.0
2,902,022 + A4249_RS14365 0.63 -0.4
2,902,023 - A4249_RS14365 0.63 +0.4
2,902,023 - A4249_RS14365 0.63 +1.8
2,902,023 - A4249_RS14365 0.63 -0.4
2,902,023 - A4249_RS14365 0.63 -0.3
2,902,023 - A4249_RS14365 0.63 -0.6
2,902,023 - A4249_RS14365 0.63 -0.2
2,902,023 - A4249_RS14365 0.63 -0.2
2,902,074 + A4249_RS14365 0.66 +1.3
2,902,075 - A4249_RS14365 0.66 -0.0
2,902,326 + A4249_RS14365 0.81 +1.0
2,902,327 - A4249_RS14365 0.82 -0.6
2,902,327 - A4249_RS14365 0.82 +0.1
2,902,327 - A4249_RS14365 0.82 -0.8
2,902,449 + A4249_RS14365 0.89 -1.3
2,902,450 - A4249_RS14365 0.89 +0.0
2,902,641 + +0.2
2,902,836 + A4249_RS14370 0.14 +1.4
2,902,836 + A4249_RS14370 0.14 +1.0
2,902,836 + A4249_RS14370 0.14 -0.1
2,902,836 + A4249_RS14370 0.14 -0.4
2,902,837 - A4249_RS14370 0.15 +0.2
2,902,837 - A4249_RS14370 0.15 -0.5
2,902,837 - A4249_RS14370 0.15 -1.1
2,902,837 - A4249_RS14370 0.15 -0.4
2,902,837 - A4249_RS14370 0.15 +0.0
2,902,837 - A4249_RS14370 0.15 +0.2
2,902,999 - A4249_RS14370 0.26 -0.1
2,903,101 - A4249_RS14370 0.34 -0.2
2,903,101 - A4249_RS14370 0.34 +0.6
2,903,247 + A4249_RS14370 0.45 -0.1
2,903,247 + A4249_RS14370 0.45 -0.2
2,903,247 + A4249_RS14370 0.45 +0.5
2,903,247 + A4249_RS14370 0.45 -0.3
2,903,247 + A4249_RS14370 0.45 -0.5
2,903,247 + A4249_RS14370 0.45 -0.0
2,903,248 - A4249_RS14370 0.45 -0.2
2,903,248 - A4249_RS14370 0.45 -0.1
2,903,248 - A4249_RS14370 0.45 +0.3
2,903,274 + A4249_RS14370 0.47 -0.0
2,903,274 + A4249_RS14370 0.47 -0.3
2,903,274 + A4249_RS14370 0.47 +0.1
2,903,275 - A4249_RS14370 0.47 -0.0
2,903,275 - A4249_RS14370 0.47 -0.8
2,903,275 - A4249_RS14370 0.47 -0.0
2,903,275 - A4249_RS14370 0.47 +0.0
2,903,275 - A4249_RS14370 0.47 +0.1
2,903,275 - A4249_RS14370 0.47 -0.2
2,903,895 + +0.1
2,903,896 - +0.0
2,903,896 - -0.0
2,903,896 - -0.1
2,903,896 - +0.2
2,904,008 + +0.7
2,904,008 + -1.0
2,904,009 - -0.2
2,904,036 + -0.9
2,904,036 + +0.1
2,904,036 + -0.1
2,904,037 - -0.4
2,904,086 + -0.2
2,904,086 + -0.2
2,904,087 - -0.3
2,904,087 - +0.0
2,904,087 - -0.1
2,904,087 - -0.2
2,904,088 + -0.6
2,904,122 + +0.0
2,904,189 + -0.3
2,904,431 + -0.5
2,904,432 - -0.1
2,904,602 + -0.2
2,904,603 - -0.3
2,904,821 + A4249_RS14375 0.16 +0.3
2,904,822 - A4249_RS14375 0.16 -0.3
2,904,822 - A4249_RS14375 0.16 -0.1

Or see this region's nucleotide sequence