Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14360

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14355 and A4249_RS14360 are separated by 211 nucleotidesA4249_RS14360 and A4249_RS14365 overlap by 1 nucleotides A4249_RS14355: A4249_RS14355 - helix-turn-helix domain-containing protein, at 2,899,616 to 2,900,323 _RS14355 A4249_RS14360: A4249_RS14360 - pilus assembly protein, at 2,900,535 to 2,900,960 _RS14360 A4249_RS14365: A4249_RS14365 - TadG family pilus assembly protein, at 2,900,960 to 2,902,636 _RS14365 Position (kb) 2900 2901Strain fitness (log2 ratio) -2 -1 0 1 2at 2899.537 kb on + strandat 2899.546 kb on + strandat 2899.547 kb on - strandat 2899.571 kb on + strandat 2899.571 kb on + strandat 2899.571 kb on + strandat 2899.571 kb on + strandat 2899.625 kb on + strandat 2899.625 kb on + strandat 2899.626 kb on - strandat 2899.767 kb on + strand, within A4249_RS14355at 2899.768 kb on - strand, within A4249_RS14355at 2899.768 kb on - strand, within A4249_RS14355at 2899.768 kb on - strand, within A4249_RS14355at 2899.994 kb on + strand, within A4249_RS14355at 2899.994 kb on + strand, within A4249_RS14355at 2899.994 kb on + strand, within A4249_RS14355at 2899.994 kb on + strand, within A4249_RS14355at 2899.994 kb on + strand, within A4249_RS14355at 2899.994 kb on + strand, within A4249_RS14355at 2899.994 kb on + strand, within A4249_RS14355at 2899.994 kb on + strand, within A4249_RS14355at 2899.995 kb on - strand, within A4249_RS14355at 2899.995 kb on - strand, within A4249_RS14355at 2899.995 kb on - strand, within A4249_RS14355at 2900.197 kb on + strand, within A4249_RS14355at 2900.197 kb on + strand, within A4249_RS14355at 2900.197 kb on + strand, within A4249_RS14355at 2900.198 kb on - strand, within A4249_RS14355at 2900.198 kb on - strand, within A4249_RS14355at 2900.198 kb on - strand, within A4249_RS14355at 2900.198 kb on - strand, within A4249_RS14355at 2900.215 kb on + strand, within A4249_RS14355at 2900.215 kb on + strand, within A4249_RS14355at 2900.215 kb on + strand, within A4249_RS14355at 2900.256 kb on - strandat 2900.289 kb on + strandat 2900.290 kb on - strandat 2900.290 kb on - strandat 2900.290 kb on - strandat 2900.290 kb on - strandat 2900.322 kb on - strandat 2900.322 kb on - strandat 2900.350 kb on + strandat 2900.350 kb on + strandat 2900.350 kb on + strandat 2900.350 kb on + strandat 2900.350 kb on + strandat 2900.350 kb on + strandat 2900.350 kb on + strandat 2900.350 kb on + strandat 2900.350 kb on + strandat 2900.350 kb on + strandat 2900.350 kb on + strandat 2900.351 kb on - strandat 2900.351 kb on - strandat 2900.351 kb on - strandat 2900.417 kb on + strandat 2900.417 kb on + strandat 2900.418 kb on - strandat 2900.418 kb on - strandat 2900.418 kb on - strandat 2900.418 kb on - strandat 2900.418 kb on - strandat 2900.418 kb on - strandat 2900.419 kb on + strandat 2900.419 kb on + strandat 2900.419 kb on + strandat 2900.419 kb on + strandat 2900.419 kb on + strandat 2900.419 kb on + strandat 2900.419 kb on + strandat 2900.419 kb on + strandat 2900.419 kb on + strandat 2900.419 kb on + strandat 2900.419 kb on + strandat 2900.419 kb on + strandat 2900.419 kb on + strandat 2900.420 kb on - strandat 2900.420 kb on - strandat 2900.420 kb on - strandat 2900.420 kb on - strandat 2900.420 kb on - strandat 2900.420 kb on - strandat 2900.420 kb on - strandat 2900.420 kb on - strandat 2900.490 kb on - strandat 2900.490 kb on - strandat 2900.552 kb on + strandat 2900.552 kb on + strandat 2900.552 kb on + strandat 2900.553 kb on - strandat 2900.553 kb on - strandat 2900.553 kb on - strandat 2900.553 kb on - strandat 2900.553 kb on - strandat 2900.553 kb on - strandat 2900.652 kb on + strand, within A4249_RS14360at 2900.652 kb on + strand, within A4249_RS14360at 2900.653 kb on - strand, within A4249_RS14360at 2900.860 kb on - strand, within A4249_RS14360at 2900.860 kb on - strand, within A4249_RS14360at 2900.956 kb on - strandat 2901.257 kb on + strand, within A4249_RS14365at 2901.257 kb on + strand, within A4249_RS14365at 2901.257 kb on + strand, within A4249_RS14365at 2901.257 kb on + strand, within A4249_RS14365at 2901.257 kb on + strand, within A4249_RS14365at 2901.257 kb on + strand, within A4249_RS14365at 2901.257 kb on + strand, within A4249_RS14365at 2901.258 kb on - strand, within A4249_RS14365at 2901.258 kb on - strand, within A4249_RS14365at 2901.258 kb on - strand, within A4249_RS14365at 2901.258 kb on - strand, within A4249_RS14365at 2901.258 kb on - strand, within A4249_RS14365at 2901.258 kb on - strand, within A4249_RS14365at 2901.259 kb on + strand, within A4249_RS14365at 2901.259 kb on + strand, within A4249_RS14365at 2901.260 kb on - strand, within A4249_RS14365at 2901.260 kb on - strand, within A4249_RS14365at 2901.546 kb on - strand, within A4249_RS14365at 2901.546 kb on - strand, within A4249_RS14365at 2901.546 kb on - strand, within A4249_RS14365at 2901.629 kb on + strand, within A4249_RS14365at 2901.630 kb on - strand, within A4249_RS14365at 2901.630 kb on - strand, within A4249_RS14365at 2901.630 kb on - strand, within A4249_RS14365at 2901.928 kb on + strand, within A4249_RS14365at 2901.928 kb on + strand, within A4249_RS14365

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,899,537 + -0.1
2,899,546 + +0.7
2,899,547 - +0.6
2,899,571 + -0.5
2,899,571 + +0.6
2,899,571 + +0.6
2,899,571 + +0.5
2,899,625 + +0.5
2,899,625 + -1.5
2,899,626 - +0.9
2,899,767 + A4249_RS14355 0.21 +1.0
2,899,768 - A4249_RS14355 0.21 -0.3
2,899,768 - A4249_RS14355 0.21 -0.9
2,899,768 - A4249_RS14355 0.21 -0.3
2,899,994 + A4249_RS14355 0.53 -0.7
2,899,994 + A4249_RS14355 0.53 -1.3
2,899,994 + A4249_RS14355 0.53 +0.3
2,899,994 + A4249_RS14355 0.53 -0.8
2,899,994 + A4249_RS14355 0.53 -0.1
2,899,994 + A4249_RS14355 0.53 -1.0
2,899,994 + A4249_RS14355 0.53 +0.3
2,899,994 + A4249_RS14355 0.53 +0.2
2,899,995 - A4249_RS14355 0.54 -1.2
2,899,995 - A4249_RS14355 0.54 +0.1
2,899,995 - A4249_RS14355 0.54 +0.0
2,900,197 + A4249_RS14355 0.82 +0.6
2,900,197 + A4249_RS14355 0.82 +0.2
2,900,197 + A4249_RS14355 0.82 -0.2
2,900,198 - A4249_RS14355 0.82 +0.5
2,900,198 - A4249_RS14355 0.82 +0.0
2,900,198 - A4249_RS14355 0.82 -0.7
2,900,198 - A4249_RS14355 0.82 +0.1
2,900,215 + A4249_RS14355 0.85 +0.2
2,900,215 + A4249_RS14355 0.85 +0.1
2,900,215 + A4249_RS14355 0.85 -0.3
2,900,256 - -1.4
2,900,289 + -0.0
2,900,290 - -0.1
2,900,290 - -0.5
2,900,290 - -0.3
2,900,290 - +2.2
2,900,322 - +0.8
2,900,322 - -0.3
2,900,350 + +0.8
2,900,350 + -0.6
2,900,350 + -0.2
2,900,350 + +0.7
2,900,350 + +1.2
2,900,350 + -0.7
2,900,350 + +0.7
2,900,350 + -0.8
2,900,350 + -0.9
2,900,350 + +0.1
2,900,350 + -0.1
2,900,351 - -0.8
2,900,351 - +0.0
2,900,351 - +0.3
2,900,417 + +0.4
2,900,417 + -1.0
2,900,418 - +0.6
2,900,418 - +0.5
2,900,418 - +1.0
2,900,418 - +0.3
2,900,418 - +0.6
2,900,418 - +0.1
2,900,419 + +0.6
2,900,419 + -1.2
2,900,419 + +0.3
2,900,419 + -0.5
2,900,419 + +0.3
2,900,419 + -1.1
2,900,419 + +0.5
2,900,419 + -0.5
2,900,419 + -1.8
2,900,419 + -0.0
2,900,419 + -0.5
2,900,419 + -0.6
2,900,419 + -0.1
2,900,420 - +0.5
2,900,420 - +0.2
2,900,420 - -1.0
2,900,420 - -0.0
2,900,420 - +0.6
2,900,420 - -0.6
2,900,420 - -0.1
2,900,420 - -0.0
2,900,490 - -0.8
2,900,490 - -0.3
2,900,552 + +0.5
2,900,552 + +0.0
2,900,552 + +0.1
2,900,553 - +0.1
2,900,553 - +0.3
2,900,553 - -0.0
2,900,553 - -0.6
2,900,553 - +0.8
2,900,553 - +1.3
2,900,652 + A4249_RS14360 0.27 +0.0
2,900,652 + A4249_RS14360 0.27 -0.6
2,900,653 - A4249_RS14360 0.28 +1.2
2,900,860 - A4249_RS14360 0.76 -0.5
2,900,860 - A4249_RS14360 0.76 -1.5
2,900,956 - -0.4
2,901,257 + A4249_RS14365 0.18 +0.1
2,901,257 + A4249_RS14365 0.18 -1.0
2,901,257 + A4249_RS14365 0.18 -0.5
2,901,257 + A4249_RS14365 0.18 +0.4
2,901,257 + A4249_RS14365 0.18 +1.1
2,901,257 + A4249_RS14365 0.18 +1.0
2,901,257 + A4249_RS14365 0.18 +0.1
2,901,258 - A4249_RS14365 0.18 +0.0
2,901,258 - A4249_RS14365 0.18 -0.5
2,901,258 - A4249_RS14365 0.18 +0.4
2,901,258 - A4249_RS14365 0.18 -0.0
2,901,258 - A4249_RS14365 0.18 -1.2
2,901,258 - A4249_RS14365 0.18 +0.7
2,901,259 + A4249_RS14365 0.18 +0.0
2,901,259 + A4249_RS14365 0.18 -0.5
2,901,260 - A4249_RS14365 0.18 -0.1
2,901,260 - A4249_RS14365 0.18 +0.4
2,901,546 - A4249_RS14365 0.35 +0.2
2,901,546 - A4249_RS14365 0.35 +0.9
2,901,546 - A4249_RS14365 0.35 +0.1
2,901,629 + A4249_RS14365 0.40 -0.1
2,901,630 - A4249_RS14365 0.40 -0.4
2,901,630 - A4249_RS14365 0.40 -0.1
2,901,630 - A4249_RS14365 0.40 +0.1
2,901,928 + A4249_RS14365 0.58 -0.3
2,901,928 + A4249_RS14365 0.58 -0.5

Or see this region's nucleotide sequence