Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14355 and A4249_RS14360 are separated by 211 nucleotides A4249_RS14360 and A4249_RS14365 overlap by 1 nucleotides
A4249_RS14355: A4249_RS14355 - helix-turn-helix domain-containing protein, at 2,899,616 to 2,900,323
_RS14355
A4249_RS14360: A4249_RS14360 - pilus assembly protein, at 2,900,535 to 2,900,960
_RS14360
A4249_RS14365: A4249_RS14365 - TadG family pilus assembly protein, at 2,900,960 to 2,902,636
_RS14365
Position (kb)
2900
2901 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2899.537 kb on + strand at 2899.546 kb on + strand at 2899.547 kb on - strand at 2899.571 kb on + strand at 2899.571 kb on + strand at 2899.571 kb on + strand at 2899.571 kb on + strand at 2899.625 kb on + strand at 2899.625 kb on + strand at 2899.626 kb on - strand at 2899.767 kb on + strand, within A4249_RS14355 at 2899.768 kb on - strand, within A4249_RS14355 at 2899.768 kb on - strand, within A4249_RS14355 at 2899.768 kb on - strand, within A4249_RS14355 at 2899.994 kb on + strand, within A4249_RS14355 at 2899.994 kb on + strand, within A4249_RS14355 at 2899.994 kb on + strand, within A4249_RS14355 at 2899.994 kb on + strand, within A4249_RS14355 at 2899.994 kb on + strand, within A4249_RS14355 at 2899.994 kb on + strand, within A4249_RS14355 at 2899.994 kb on + strand, within A4249_RS14355 at 2899.994 kb on + strand, within A4249_RS14355 at 2899.995 kb on - strand, within A4249_RS14355 at 2899.995 kb on - strand, within A4249_RS14355 at 2899.995 kb on - strand, within A4249_RS14355 at 2900.197 kb on + strand, within A4249_RS14355 at 2900.197 kb on + strand, within A4249_RS14355 at 2900.197 kb on + strand, within A4249_RS14355 at 2900.198 kb on - strand, within A4249_RS14355 at 2900.198 kb on - strand, within A4249_RS14355 at 2900.198 kb on - strand, within A4249_RS14355 at 2900.198 kb on - strand, within A4249_RS14355 at 2900.215 kb on + strand, within A4249_RS14355 at 2900.215 kb on + strand, within A4249_RS14355 at 2900.215 kb on + strand, within A4249_RS14355 at 2900.256 kb on - strand at 2900.289 kb on + strand at 2900.290 kb on - strand at 2900.290 kb on - strand at 2900.290 kb on - strand at 2900.290 kb on - strand at 2900.322 kb on - strand at 2900.322 kb on - strand at 2900.350 kb on + strand at 2900.350 kb on + strand at 2900.350 kb on + strand at 2900.350 kb on + strand at 2900.350 kb on + strand at 2900.350 kb on + strand at 2900.350 kb on + strand at 2900.350 kb on + strand at 2900.350 kb on + strand at 2900.350 kb on + strand at 2900.350 kb on + strand at 2900.351 kb on - strand at 2900.351 kb on - strand at 2900.351 kb on - strand at 2900.417 kb on + strand at 2900.417 kb on + strand at 2900.418 kb on - strand at 2900.418 kb on - strand at 2900.418 kb on - strand at 2900.418 kb on - strand at 2900.418 kb on - strand at 2900.418 kb on - strand at 2900.419 kb on + strand at 2900.419 kb on + strand at 2900.419 kb on + strand at 2900.419 kb on + strand at 2900.419 kb on + strand at 2900.419 kb on + strand at 2900.419 kb on + strand at 2900.419 kb on + strand at 2900.419 kb on + strand at 2900.419 kb on + strand at 2900.419 kb on + strand at 2900.419 kb on + strand at 2900.419 kb on + strand at 2900.420 kb on - strand at 2900.420 kb on - strand at 2900.420 kb on - strand at 2900.420 kb on - strand at 2900.420 kb on - strand at 2900.420 kb on - strand at 2900.420 kb on - strand at 2900.420 kb on - strand at 2900.490 kb on - strand at 2900.490 kb on - strand at 2900.552 kb on + strand at 2900.552 kb on + strand at 2900.552 kb on + strand at 2900.553 kb on - strand at 2900.553 kb on - strand at 2900.553 kb on - strand at 2900.553 kb on - strand at 2900.553 kb on - strand at 2900.553 kb on - strand at 2900.652 kb on + strand, within A4249_RS14360 at 2900.652 kb on + strand, within A4249_RS14360 at 2900.653 kb on - strand, within A4249_RS14360 at 2900.860 kb on - strand, within A4249_RS14360 at 2900.860 kb on - strand, within A4249_RS14360 at 2900.956 kb on - strand at 2901.257 kb on + strand, within A4249_RS14365 at 2901.257 kb on + strand, within A4249_RS14365 at 2901.257 kb on + strand, within A4249_RS14365 at 2901.257 kb on + strand, within A4249_RS14365 at 2901.257 kb on + strand, within A4249_RS14365 at 2901.257 kb on + strand, within A4249_RS14365 at 2901.257 kb on + strand, within A4249_RS14365 at 2901.258 kb on - strand, within A4249_RS14365 at 2901.258 kb on - strand, within A4249_RS14365 at 2901.258 kb on - strand, within A4249_RS14365 at 2901.258 kb on - strand, within A4249_RS14365 at 2901.258 kb on - strand, within A4249_RS14365 at 2901.258 kb on - strand, within A4249_RS14365 at 2901.259 kb on + strand, within A4249_RS14365 at 2901.259 kb on + strand, within A4249_RS14365 at 2901.260 kb on - strand, within A4249_RS14365 at 2901.260 kb on - strand, within A4249_RS14365 at 2901.546 kb on - strand, within A4249_RS14365 at 2901.546 kb on - strand, within A4249_RS14365 at 2901.546 kb on - strand, within A4249_RS14365 at 2901.629 kb on + strand, within A4249_RS14365 at 2901.630 kb on - strand, within A4249_RS14365 at 2901.630 kb on - strand, within A4249_RS14365 at 2901.630 kb on - strand, within A4249_RS14365 at 2901.928 kb on + strand, within A4249_RS14365 at 2901.928 kb on + strand, within A4249_RS14365
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,899,537 + -0.1 2,899,546 + +0.7 2,899,547 - +0.6 2,899,571 + -0.5 2,899,571 + +0.6 2,899,571 + +0.6 2,899,571 + +0.5 2,899,625 + +0.5 2,899,625 + -1.5 2,899,626 - +0.9 2,899,767 + A4249_RS14355 0.21 +1.0 2,899,768 - A4249_RS14355 0.21 -0.3 2,899,768 - A4249_RS14355 0.21 -0.9 2,899,768 - A4249_RS14355 0.21 -0.3 2,899,994 + A4249_RS14355 0.53 -0.7 2,899,994 + A4249_RS14355 0.53 -1.3 2,899,994 + A4249_RS14355 0.53 +0.3 2,899,994 + A4249_RS14355 0.53 -0.8 2,899,994 + A4249_RS14355 0.53 -0.1 2,899,994 + A4249_RS14355 0.53 -1.0 2,899,994 + A4249_RS14355 0.53 +0.3 2,899,994 + A4249_RS14355 0.53 +0.2 2,899,995 - A4249_RS14355 0.54 -1.2 2,899,995 - A4249_RS14355 0.54 +0.1 2,899,995 - A4249_RS14355 0.54 +0.0 2,900,197 + A4249_RS14355 0.82 +0.6 2,900,197 + A4249_RS14355 0.82 +0.2 2,900,197 + A4249_RS14355 0.82 -0.2 2,900,198 - A4249_RS14355 0.82 +0.5 2,900,198 - A4249_RS14355 0.82 +0.0 2,900,198 - A4249_RS14355 0.82 -0.7 2,900,198 - A4249_RS14355 0.82 +0.1 2,900,215 + A4249_RS14355 0.85 +0.2 2,900,215 + A4249_RS14355 0.85 +0.1 2,900,215 + A4249_RS14355 0.85 -0.3 2,900,256 - -1.4 2,900,289 + -0.0 2,900,290 - -0.1 2,900,290 - -0.5 2,900,290 - -0.3 2,900,290 - +2.2 2,900,322 - +0.8 2,900,322 - -0.3 2,900,350 + +0.8 2,900,350 + -0.6 2,900,350 + -0.2 2,900,350 + +0.7 2,900,350 + +1.2 2,900,350 + -0.7 2,900,350 + +0.7 2,900,350 + -0.8 2,900,350 + -0.9 2,900,350 + +0.1 2,900,350 + -0.1 2,900,351 - -0.8 2,900,351 - +0.0 2,900,351 - +0.3 2,900,417 + +0.4 2,900,417 + -1.0 2,900,418 - +0.6 2,900,418 - +0.5 2,900,418 - +1.0 2,900,418 - +0.3 2,900,418 - +0.6 2,900,418 - +0.1 2,900,419 + +0.6 2,900,419 + -1.2 2,900,419 + +0.3 2,900,419 + -0.5 2,900,419 + +0.3 2,900,419 + -1.1 2,900,419 + +0.5 2,900,419 + -0.5 2,900,419 + -1.8 2,900,419 + -0.0 2,900,419 + -0.5 2,900,419 + -0.6 2,900,419 + -0.1 2,900,420 - +0.5 2,900,420 - +0.2 2,900,420 - -1.0 2,900,420 - -0.0 2,900,420 - +0.6 2,900,420 - -0.6 2,900,420 - -0.1 2,900,420 - -0.0 2,900,490 - -0.8 2,900,490 - -0.3 2,900,552 + +0.5 2,900,552 + +0.0 2,900,552 + +0.1 2,900,553 - +0.1 2,900,553 - +0.3 2,900,553 - -0.0 2,900,553 - -0.6 2,900,553 - +0.8 2,900,553 - +1.3 2,900,652 + A4249_RS14360 0.27 +0.0 2,900,652 + A4249_RS14360 0.27 -0.6 2,900,653 - A4249_RS14360 0.28 +1.2 2,900,860 - A4249_RS14360 0.76 -0.5 2,900,860 - A4249_RS14360 0.76 -1.5 2,900,956 - -0.4 2,901,257 + A4249_RS14365 0.18 +0.1 2,901,257 + A4249_RS14365 0.18 -1.0 2,901,257 + A4249_RS14365 0.18 -0.5 2,901,257 + A4249_RS14365 0.18 +0.4 2,901,257 + A4249_RS14365 0.18 +1.1 2,901,257 + A4249_RS14365 0.18 +1.0 2,901,257 + A4249_RS14365 0.18 +0.1 2,901,258 - A4249_RS14365 0.18 +0.0 2,901,258 - A4249_RS14365 0.18 -0.5 2,901,258 - A4249_RS14365 0.18 +0.4 2,901,258 - A4249_RS14365 0.18 -0.0 2,901,258 - A4249_RS14365 0.18 -1.2 2,901,258 - A4249_RS14365 0.18 +0.7 2,901,259 + A4249_RS14365 0.18 +0.0 2,901,259 + A4249_RS14365 0.18 -0.5 2,901,260 - A4249_RS14365 0.18 -0.1 2,901,260 - A4249_RS14365 0.18 +0.4 2,901,546 - A4249_RS14365 0.35 +0.2 2,901,546 - A4249_RS14365 0.35 +0.9 2,901,546 - A4249_RS14365 0.35 +0.1 2,901,629 + A4249_RS14365 0.40 -0.1 2,901,630 - A4249_RS14365 0.40 -0.4 2,901,630 - A4249_RS14365 0.40 -0.1 2,901,630 - A4249_RS14365 0.40 +0.1 2,901,928 + A4249_RS14365 0.58 -0.3 2,901,928 + A4249_RS14365 0.58 -0.5
Or see this region's nucleotide sequence