Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14290

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14285 and A4249_RS14290 are separated by 55 nucleotidesA4249_RS14290 and A4249_RS14295 are separated by 273 nucleotides A4249_RS14285: A4249_RS14285 - acetyl-CoA hydrolase/transferase C-terminal domain-containing protein, at 2,879,046 to 2,880,365 _RS14285 A4249_RS14290: A4249_RS14290 - phosphatase PAP2 family protein, at 2,880,421 to 2,881,197 _RS14290 A4249_RS14295: A4249_RS14295 - ribonucleoside-diphosphate reductase subunit alpha, at 2,881,471 to 2,883,360 _RS14295 Position (kb) 2880 2881 2882Strain fitness (log2 ratio) -3 -2 -1 0 1at 2879.458 kb on + strand, within A4249_RS14285at 2879.458 kb on + strand, within A4249_RS14285at 2879.458 kb on + strand, within A4249_RS14285at 2879.458 kb on + strand, within A4249_RS14285at 2879.458 kb on + strand, within A4249_RS14285at 2879.458 kb on + strand, within A4249_RS14285at 2879.458 kb on + strand, within A4249_RS14285at 2879.458 kb on + strand, within A4249_RS14285at 2879.459 kb on - strand, within A4249_RS14285at 2879.459 kb on - strand, within A4249_RS14285at 2879.459 kb on - strand, within A4249_RS14285at 2879.459 kb on - strand, within A4249_RS14285at 2879.459 kb on - strand, within A4249_RS14285at 2879.459 kb on - strand, within A4249_RS14285at 2879.459 kb on - strand, within A4249_RS14285at 2879.459 kb on - strand, within A4249_RS14285at 2879.459 kb on - strand, within A4249_RS14285at 2879.506 kb on + strand, within A4249_RS14285at 2879.506 kb on + strand, within A4249_RS14285at 2879.506 kb on + strand, within A4249_RS14285at 2879.506 kb on + strand, within A4249_RS14285at 2879.506 kb on + strand, within A4249_RS14285at 2879.506 kb on + strand, within A4249_RS14285at 2879.506 kb on + strand, within A4249_RS14285at 2879.506 kb on + strand, within A4249_RS14285at 2879.507 kb on - strand, within A4249_RS14285at 2879.507 kb on - strand, within A4249_RS14285at 2879.507 kb on - strand, within A4249_RS14285at 2879.507 kb on - strand, within A4249_RS14285at 2879.544 kb on + strand, within A4249_RS14285at 2879.545 kb on - strand, within A4249_RS14285at 2879.545 kb on - strand, within A4249_RS14285at 2879.627 kb on + strand, within A4249_RS14285at 2879.628 kb on - strand, within A4249_RS14285at 2879.978 kb on + strand, within A4249_RS14285at 2879.978 kb on + strand, within A4249_RS14285at 2879.978 kb on + strand, within A4249_RS14285at 2879.978 kb on + strand, within A4249_RS14285at 2879.978 kb on + strand, within A4249_RS14285at 2879.979 kb on - strand, within A4249_RS14285at 2879.979 kb on - strand, within A4249_RS14285at 2879.979 kb on - strand, within A4249_RS14285at 2879.979 kb on - strand, within A4249_RS14285at 2879.979 kb on - strand, within A4249_RS14285at 2879.979 kb on - strand, within A4249_RS14285at 2879.979 kb on - strand, within A4249_RS14285at 2879.979 kb on - strand, within A4249_RS14285at 2879.979 kb on - strand, within A4249_RS14285at 2880.149 kb on - strand, within A4249_RS14285at 2880.190 kb on + strand, within A4249_RS14285at 2880.190 kb on + strand, within A4249_RS14285at 2880.190 kb on + strand, within A4249_RS14285at 2880.190 kb on + strand, within A4249_RS14285at 2880.190 kb on + strand, within A4249_RS14285at 2880.190 kb on + strand, within A4249_RS14285at 2880.190 kb on + strand, within A4249_RS14285at 2880.191 kb on - strand, within A4249_RS14285at 2880.191 kb on - strand, within A4249_RS14285at 2880.191 kb on - strand, within A4249_RS14285at 2880.191 kb on - strand, within A4249_RS14285at 2880.191 kb on - strand, within A4249_RS14285at 2880.191 kb on - strand, within A4249_RS14285at 2880.191 kb on - strand, within A4249_RS14285at 2880.191 kb on - strand, within A4249_RS14285at 2880.193 kb on + strand, within A4249_RS14285at 2880.193 kb on + strand, within A4249_RS14285at 2880.193 kb on + strand, within A4249_RS14285at 2880.193 kb on + strand, within A4249_RS14285at 2880.193 kb on + strand, within A4249_RS14285at 2880.193 kb on + strand, within A4249_RS14285at 2880.193 kb on + strand, within A4249_RS14285at 2880.193 kb on + strand, within A4249_RS14285at 2880.194 kb on - strand, within A4249_RS14285at 2880.194 kb on - strand, within A4249_RS14285at 2880.346 kb on + strandat 2880.346 kb on + strandat 2880.347 kb on - strandat 2880.347 kb on - strandat 2880.347 kb on - strandat 2880.394 kb on + strandat 2880.394 kb on + strandat 2880.395 kb on - strandat 2880.422 kb on + strandat 2880.422 kb on + strandat 2880.423 kb on - strandat 2880.512 kb on + strand, within A4249_RS14290at 2880.513 kb on - strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.596 kb on + strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.597 kb on - strand, within A4249_RS14290at 2880.707 kb on + strand, within A4249_RS14290at 2880.707 kb on + strand, within A4249_RS14290at 2880.708 kb on - strand, within A4249_RS14290at 2880.708 kb on - strand, within A4249_RS14290at 2880.708 kb on - strand, within A4249_RS14290at 2880.708 kb on - strand, within A4249_RS14290at 2880.708 kb on - strand, within A4249_RS14290at 2880.708 kb on - strand, within A4249_RS14290at 2880.721 kb on + strand, within A4249_RS14290at 2880.721 kb on + strand, within A4249_RS14290at 2880.722 kb on - strand, within A4249_RS14290at 2880.922 kb on + strand, within A4249_RS14290at 2880.922 kb on + strand, within A4249_RS14290at 2880.922 kb on + strand, within A4249_RS14290at 2880.923 kb on - strand, within A4249_RS14290at 2880.923 kb on - strand, within A4249_RS14290at 2880.923 kb on - strand, within A4249_RS14290at 2880.923 kb on - strand, within A4249_RS14290at 2880.923 kb on - strand, within A4249_RS14290at 2880.923 kb on - strand, within A4249_RS14290at 2880.923 kb on - strand, within A4249_RS14290at 2880.970 kb on + strand, within A4249_RS14290at 2880.971 kb on - strand, within A4249_RS14290at 2881.010 kb on + strand, within A4249_RS14290at 2881.010 kb on + strand, within A4249_RS14290at 2881.010 kb on + strand, within A4249_RS14290at 2881.011 kb on - strand, within A4249_RS14290at 2881.011 kb on - strand, within A4249_RS14290at 2881.011 kb on - strand, within A4249_RS14290at 2881.165 kb on + strandat 2881.180 kb on + strandat 2881.385 kb on + strandat 2881.387 kb on + strandat 2881.387 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,879,458 + A4249_RS14285 0.31 +1.0
2,879,458 + A4249_RS14285 0.31 -0.5
2,879,458 + A4249_RS14285 0.31 +0.8
2,879,458 + A4249_RS14285 0.31 -0.9
2,879,458 + A4249_RS14285 0.31 -0.1
2,879,458 + A4249_RS14285 0.31 +1.1
2,879,458 + A4249_RS14285 0.31 -0.2
2,879,458 + A4249_RS14285 0.31 +0.7
2,879,459 - A4249_RS14285 0.31 +0.5
2,879,459 - A4249_RS14285 0.31 -3.0
2,879,459 - A4249_RS14285 0.31 -0.8
2,879,459 - A4249_RS14285 0.31 +0.0
2,879,459 - A4249_RS14285 0.31 +0.3
2,879,459 - A4249_RS14285 0.31 +0.2
2,879,459 - A4249_RS14285 0.31 +0.6
2,879,459 - A4249_RS14285 0.31 +0.2
2,879,459 - A4249_RS14285 0.31 -0.1
2,879,506 + A4249_RS14285 0.35 -0.2
2,879,506 + A4249_RS14285 0.35 +0.5
2,879,506 + A4249_RS14285 0.35 +0.6
2,879,506 + A4249_RS14285 0.35 -0.1
2,879,506 + A4249_RS14285 0.35 -0.2
2,879,506 + A4249_RS14285 0.35 +0.0
2,879,506 + A4249_RS14285 0.35 +0.4
2,879,506 + A4249_RS14285 0.35 +0.1
2,879,507 - A4249_RS14285 0.35 +0.1
2,879,507 - A4249_RS14285 0.35 -0.6
2,879,507 - A4249_RS14285 0.35 +0.4
2,879,507 - A4249_RS14285 0.35 -0.0
2,879,544 + A4249_RS14285 0.38 -0.2
2,879,545 - A4249_RS14285 0.38 -0.5
2,879,545 - A4249_RS14285 0.38 +0.2
2,879,627 + A4249_RS14285 0.44 +0.0
2,879,628 - A4249_RS14285 0.44 -0.1
2,879,978 + A4249_RS14285 0.71 +0.5
2,879,978 + A4249_RS14285 0.71 +1.0
2,879,978 + A4249_RS14285 0.71 +0.6
2,879,978 + A4249_RS14285 0.71 -0.4
2,879,978 + A4249_RS14285 0.71 -1.4
2,879,979 - A4249_RS14285 0.71 +0.1
2,879,979 - A4249_RS14285 0.71 +0.3
2,879,979 - A4249_RS14285 0.71 -0.9
2,879,979 - A4249_RS14285 0.71 +0.7
2,879,979 - A4249_RS14285 0.71 -0.7
2,879,979 - A4249_RS14285 0.71 +0.0
2,879,979 - A4249_RS14285 0.71 -1.8
2,879,979 - A4249_RS14285 0.71 -0.4
2,879,979 - A4249_RS14285 0.71 -0.1
2,880,149 - A4249_RS14285 0.84 +0.4
2,880,190 + A4249_RS14285 0.87 -0.3
2,880,190 + A4249_RS14285 0.87 +0.0
2,880,190 + A4249_RS14285 0.87 -0.1
2,880,190 + A4249_RS14285 0.87 -0.6
2,880,190 + A4249_RS14285 0.87 +0.2
2,880,190 + A4249_RS14285 0.87 +0.3
2,880,190 + A4249_RS14285 0.87 +0.3
2,880,191 - A4249_RS14285 0.87 +0.8
2,880,191 - A4249_RS14285 0.87 -0.1
2,880,191 - A4249_RS14285 0.87 +1.1
2,880,191 - A4249_RS14285 0.87 +0.4
2,880,191 - A4249_RS14285 0.87 +0.5
2,880,191 - A4249_RS14285 0.87 +0.5
2,880,191 - A4249_RS14285 0.87 +0.2
2,880,191 - A4249_RS14285 0.87 +0.2
2,880,193 + A4249_RS14285 0.87 +0.0
2,880,193 + A4249_RS14285 0.87 +0.2
2,880,193 + A4249_RS14285 0.87 +0.3
2,880,193 + A4249_RS14285 0.87 -0.9
2,880,193 + A4249_RS14285 0.87 -0.3
2,880,193 + A4249_RS14285 0.87 -0.9
2,880,193 + A4249_RS14285 0.87 +0.2
2,880,193 + A4249_RS14285 0.87 -0.3
2,880,194 - A4249_RS14285 0.87 +0.2
2,880,194 - A4249_RS14285 0.87 -0.6
2,880,346 + -0.4
2,880,346 + +0.5
2,880,347 - +0.1
2,880,347 - -0.0
2,880,347 - -0.1
2,880,394 + -0.5
2,880,394 + +0.0
2,880,395 - -1.0
2,880,422 + -0.2
2,880,422 + -0.4
2,880,423 - +0.1
2,880,512 + A4249_RS14290 0.12 +0.7
2,880,513 - A4249_RS14290 0.12 -0.1
2,880,596 + A4249_RS14290 0.23 -1.1
2,880,596 + A4249_RS14290 0.23 +0.7
2,880,596 + A4249_RS14290 0.23 -1.2
2,880,596 + A4249_RS14290 0.23 -1.8
2,880,596 + A4249_RS14290 0.23 +1.0
2,880,596 + A4249_RS14290 0.23 +0.8
2,880,596 + A4249_RS14290 0.23 -0.4
2,880,596 + A4249_RS14290 0.23 +0.6
2,880,596 + A4249_RS14290 0.23 -0.2
2,880,596 + A4249_RS14290 0.23 +0.2
2,880,596 + A4249_RS14290 0.23 +1.0
2,880,597 - A4249_RS14290 0.23 +0.1
2,880,597 - A4249_RS14290 0.23 +0.0
2,880,597 - A4249_RS14290 0.23 +0.8
2,880,597 - A4249_RS14290 0.23 +0.5
2,880,597 - A4249_RS14290 0.23 -0.3
2,880,597 - A4249_RS14290 0.23 +0.3
2,880,597 - A4249_RS14290 0.23 +0.1
2,880,597 - A4249_RS14290 0.23 -0.2
2,880,707 + A4249_RS14290 0.37 +0.7
2,880,707 + A4249_RS14290 0.37 +0.5
2,880,708 - A4249_RS14290 0.37 +0.4
2,880,708 - A4249_RS14290 0.37 -1.1
2,880,708 - A4249_RS14290 0.37 +0.9
2,880,708 - A4249_RS14290 0.37 -0.2
2,880,708 - A4249_RS14290 0.37 -0.7
2,880,708 - A4249_RS14290 0.37 +0.3
2,880,721 + A4249_RS14290 0.39 +0.1
2,880,721 + A4249_RS14290 0.39 +0.3
2,880,722 - A4249_RS14290 0.39 -1.3
2,880,922 + A4249_RS14290 0.64 +0.1
2,880,922 + A4249_RS14290 0.64 -0.5
2,880,922 + A4249_RS14290 0.64 +0.6
2,880,923 - A4249_RS14290 0.65 -0.2
2,880,923 - A4249_RS14290 0.65 +0.1
2,880,923 - A4249_RS14290 0.65 -0.3
2,880,923 - A4249_RS14290 0.65 +0.3
2,880,923 - A4249_RS14290 0.65 -0.5
2,880,923 - A4249_RS14290 0.65 -0.3
2,880,923 - A4249_RS14290 0.65 -1.0
2,880,970 + A4249_RS14290 0.71 -1.0
2,880,971 - A4249_RS14290 0.71 +0.1
2,881,010 + A4249_RS14290 0.76 +0.7
2,881,010 + A4249_RS14290 0.76 -0.9
2,881,010 + A4249_RS14290 0.76 +0.5
2,881,011 - A4249_RS14290 0.76 +0.4
2,881,011 - A4249_RS14290 0.76 -0.3
2,881,011 - A4249_RS14290 0.76 -1.3
2,881,165 + +0.2
2,881,180 + +0.1
2,881,385 + -0.9
2,881,387 + -1.2
2,881,387 + +0.4

Or see this region's nucleotide sequence