Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14240

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14235 and A4249_RS14240 are separated by 4 nucleotidesA4249_RS14240 and A4249_RS14245 overlap by 4 nucleotidesA4249_RS14245 and A4249_RS14250 are separated by 126 nucleotides A4249_RS14235: A4249_RS14235 - NAD(P)-dependent alcohol dehydrogenase, at 2,866,834 to 2,867,925 _RS14235 A4249_RS14240: A4249_RS14240 - HAMP domain-containing sensor histidine kinase, at 2,867,930 to 2,869,402 _RS14240 A4249_RS14245: A4249_RS14245 - TVP38/TMEM64 family protein, at 2,869,399 to 2,870,148 _RS14245 A4249_RS14250: A4249_RS14250 - 50S ribosomal protein L34, at 2,870,275 to 2,870,409 _RS14250 Position (kb) 2867 2868 2869 2870Strain fitness (log2 ratio) -2 -1 0 1at 2866.942 kb on + strandat 2866.943 kb on - strandat 2866.967 kb on + strand, within A4249_RS14235at 2867.002 kb on + strand, within A4249_RS14235at 2867.002 kb on + strand, within A4249_RS14235at 2867.003 kb on - strand, within A4249_RS14235at 2867.152 kb on + strand, within A4249_RS14235at 2867.152 kb on + strand, within A4249_RS14235at 2867.152 kb on + strand, within A4249_RS14235at 2867.152 kb on + strand, within A4249_RS14235at 2867.153 kb on - strand, within A4249_RS14235at 2867.153 kb on - strand, within A4249_RS14235at 2867.185 kb on + strand, within A4249_RS14235at 2867.185 kb on + strand, within A4249_RS14235at 2867.185 kb on + strand, within A4249_RS14235at 2867.185 kb on + strand, within A4249_RS14235at 2867.185 kb on + strand, within A4249_RS14235at 2867.185 kb on + strand, within A4249_RS14235at 2867.185 kb on + strand, within A4249_RS14235at 2867.186 kb on - strand, within A4249_RS14235at 2867.186 kb on - strand, within A4249_RS14235at 2867.186 kb on - strand, within A4249_RS14235at 2867.186 kb on - strand, within A4249_RS14235at 2867.186 kb on - strand, within A4249_RS14235at 2867.186 kb on - strand, within A4249_RS14235at 2867.186 kb on - strand, within A4249_RS14235at 2867.186 kb on - strand, within A4249_RS14235at 2867.187 kb on + strand, within A4249_RS14235at 2867.236 kb on + strand, within A4249_RS14235at 2867.236 kb on + strand, within A4249_RS14235at 2867.237 kb on - strand, within A4249_RS14235at 2867.237 kb on - strand, within A4249_RS14235at 2867.237 kb on - strand, within A4249_RS14235at 2867.250 kb on + strand, within A4249_RS14235at 2867.250 kb on + strand, within A4249_RS14235at 2867.250 kb on + strand, within A4249_RS14235at 2867.251 kb on - strand, within A4249_RS14235at 2867.251 kb on - strand, within A4249_RS14235at 2867.251 kb on - strand, within A4249_RS14235at 2867.251 kb on - strand, within A4249_RS14235at 2867.251 kb on - strand, within A4249_RS14235at 2867.251 kb on - strand, within A4249_RS14235at 2867.251 kb on - strand, within A4249_RS14235at 2867.255 kb on - strand, within A4249_RS14235at 2867.255 kb on - strand, within A4249_RS14235at 2867.255 kb on - strand, within A4249_RS14235at 2867.255 kb on - strand, within A4249_RS14235at 2867.255 kb on - strand, within A4249_RS14235at 2867.439 kb on + strand, within A4249_RS14235at 2867.440 kb on - strand, within A4249_RS14235at 2867.544 kb on + strand, within A4249_RS14235at 2867.706 kb on + strand, within A4249_RS14235at 2867.707 kb on - strand, within A4249_RS14235at 2867.707 kb on - strand, within A4249_RS14235at 2867.854 kb on + strandat 2867.854 kb on + strandat 2867.854 kb on + strandat 2867.854 kb on + strandat 2867.855 kb on - strandat 2867.855 kb on - strandat 2867.855 kb on - strandat 2867.855 kb on - strandat 2867.855 kb on - strandat 2867.855 kb on - strandat 2867.890 kb on + strandat 2867.890 kb on + strandat 2867.890 kb on + strandat 2867.891 kb on - strandat 2867.891 kb on - strandat 2869.449 kb on + strandat 2869.449 kb on + strandat 2869.449 kb on + strandat 2869.450 kb on - strandat 2869.583 kb on + strand, within A4249_RS14245at 2869.583 kb on + strand, within A4249_RS14245at 2869.584 kb on - strand, within A4249_RS14245at 2869.584 kb on - strand, within A4249_RS14245at 2869.584 kb on - strand, within A4249_RS14245at 2869.584 kb on - strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.629 kb on - strand, within A4249_RS14245at 2869.629 kb on - strand, within A4249_RS14245at 2869.814 kb on + strand, within A4249_RS14245at 2869.815 kb on - strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.877 kb on + strand, within A4249_RS14245at 2869.877 kb on + strand, within A4249_RS14245at 2869.877 kb on + strand, within A4249_RS14245at 2869.877 kb on + strand, within A4249_RS14245at 2869.878 kb on - strand, within A4249_RS14245at 2869.878 kb on - strand, within A4249_RS14245at 2869.953 kb on - strand, within A4249_RS14245at 2870.000 kb on + strand, within A4249_RS14245at 2870.000 kb on + strand, within A4249_RS14245at 2870.000 kb on + strand, within A4249_RS14245at 2870.000 kb on + strand, within A4249_RS14245at 2870.000 kb on + strand, within A4249_RS14245at 2870.001 kb on - strand, within A4249_RS14245at 2870.001 kb on - strand, within A4249_RS14245at 2870.001 kb on - strand, within A4249_RS14245at 2870.049 kb on - strand, within A4249_RS14245at 2870.049 kb on - strand, within A4249_RS14245at 2870.049 kb on - strand, within A4249_RS14245at 2870.049 kb on - strand, within A4249_RS14245

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,866,942 + -0.0
2,866,943 - -0.3
2,866,967 + A4249_RS14235 0.12 -0.4
2,867,002 + A4249_RS14235 0.15 -0.2
2,867,002 + A4249_RS14235 0.15 -0.6
2,867,003 - A4249_RS14235 0.15 -0.5
2,867,152 + A4249_RS14235 0.29 -0.1
2,867,152 + A4249_RS14235 0.29 -0.1
2,867,152 + A4249_RS14235 0.29 -1.4
2,867,152 + A4249_RS14235 0.29 -1.2
2,867,153 - A4249_RS14235 0.29 -0.5
2,867,153 - A4249_RS14235 0.29 +0.8
2,867,185 + A4249_RS14235 0.32 -0.0
2,867,185 + A4249_RS14235 0.32 -0.2
2,867,185 + A4249_RS14235 0.32 -1.1
2,867,185 + A4249_RS14235 0.32 -0.1
2,867,185 + A4249_RS14235 0.32 +0.6
2,867,185 + A4249_RS14235 0.32 -0.1
2,867,185 + A4249_RS14235 0.32 -0.1
2,867,186 - A4249_RS14235 0.32 +0.2
2,867,186 - A4249_RS14235 0.32 -0.5
2,867,186 - A4249_RS14235 0.32 -0.2
2,867,186 - A4249_RS14235 0.32 +0.1
2,867,186 - A4249_RS14235 0.32 -0.2
2,867,186 - A4249_RS14235 0.32 -0.0
2,867,186 - A4249_RS14235 0.32 +0.1
2,867,186 - A4249_RS14235 0.32 -0.5
2,867,187 + A4249_RS14235 0.32 +0.0
2,867,236 + A4249_RS14235 0.37 +0.1
2,867,236 + A4249_RS14235 0.37 +0.2
2,867,237 - A4249_RS14235 0.37 -0.9
2,867,237 - A4249_RS14235 0.37 +0.5
2,867,237 - A4249_RS14235 0.37 +0.2
2,867,250 + A4249_RS14235 0.38 +1.2
2,867,250 + A4249_RS14235 0.38 +0.5
2,867,250 + A4249_RS14235 0.38 -0.1
2,867,251 - A4249_RS14235 0.38 -0.4
2,867,251 - A4249_RS14235 0.38 -0.2
2,867,251 - A4249_RS14235 0.38 +0.2
2,867,251 - A4249_RS14235 0.38 -0.4
2,867,251 - A4249_RS14235 0.38 -0.0
2,867,251 - A4249_RS14235 0.38 -1.1
2,867,251 - A4249_RS14235 0.38 -0.9
2,867,255 - A4249_RS14235 0.39 -0.3
2,867,255 - A4249_RS14235 0.39 -2.0
2,867,255 - A4249_RS14235 0.39 -0.0
2,867,255 - A4249_RS14235 0.39 +0.2
2,867,255 - A4249_RS14235 0.39 +0.7
2,867,439 + A4249_RS14235 0.55 +0.1
2,867,440 - A4249_RS14235 0.55 +0.0
2,867,544 + A4249_RS14235 0.65 -0.7
2,867,706 + A4249_RS14235 0.80 +0.1
2,867,707 - A4249_RS14235 0.80 +0.4
2,867,707 - A4249_RS14235 0.80 +0.3
2,867,854 + -0.2
2,867,854 + -0.9
2,867,854 + -0.4
2,867,854 + +0.6
2,867,855 - -0.2
2,867,855 - +1.0
2,867,855 - +0.1
2,867,855 - -0.8
2,867,855 - +0.6
2,867,855 - +0.6
2,867,890 + -0.3
2,867,890 + -0.2
2,867,890 + +1.2
2,867,891 - -0.6
2,867,891 - -0.8
2,869,449 + +0.9
2,869,449 + +0.1
2,869,449 + -0.1
2,869,450 - +0.1
2,869,583 + A4249_RS14245 0.25 +0.3
2,869,583 + A4249_RS14245 0.25 +0.4
2,869,584 - A4249_RS14245 0.25 +0.2
2,869,584 - A4249_RS14245 0.25 +0.2
2,869,584 - A4249_RS14245 0.25 -0.0
2,869,584 - A4249_RS14245 0.25 +0.5
2,869,628 + A4249_RS14245 0.31 -0.2
2,869,628 + A4249_RS14245 0.31 +1.1
2,869,628 + A4249_RS14245 0.31 -0.1
2,869,628 + A4249_RS14245 0.31 +0.3
2,869,628 + A4249_RS14245 0.31 +0.1
2,869,628 + A4249_RS14245 0.31 +0.3
2,869,628 + A4249_RS14245 0.31 -0.3
2,869,628 + A4249_RS14245 0.31 -0.1
2,869,628 + A4249_RS14245 0.31 +0.1
2,869,629 - A4249_RS14245 0.31 -0.2
2,869,629 - A4249_RS14245 0.31 +0.4
2,869,814 + A4249_RS14245 0.55 +0.4
2,869,815 - A4249_RS14245 0.55 +0.1
2,869,820 + A4249_RS14245 0.56 +0.1
2,869,820 + A4249_RS14245 0.56 +0.0
2,869,820 + A4249_RS14245 0.56 +1.5
2,869,820 + A4249_RS14245 0.56 -1.6
2,869,820 + A4249_RS14245 0.56 +0.1
2,869,820 + A4249_RS14245 0.56 +0.4
2,869,820 + A4249_RS14245 0.56 -0.5
2,869,820 + A4249_RS14245 0.56 -0.4
2,869,820 + A4249_RS14245 0.56 +0.9
2,869,820 + A4249_RS14245 0.56 +0.3
2,869,820 + A4249_RS14245 0.56 -0.0
2,869,820 + A4249_RS14245 0.56 -0.3
2,869,820 + A4249_RS14245 0.56 -0.2
2,869,821 - A4249_RS14245 0.56 -0.0
2,869,821 - A4249_RS14245 0.56 +0.1
2,869,821 - A4249_RS14245 0.56 +0.1
2,869,821 - A4249_RS14245 0.56 +0.1
2,869,821 - A4249_RS14245 0.56 -0.0
2,869,821 - A4249_RS14245 0.56 -0.7
2,869,821 - A4249_RS14245 0.56 +0.0
2,869,821 - A4249_RS14245 0.56 +0.4
2,869,821 - A4249_RS14245 0.56 +0.3
2,869,821 - A4249_RS14245 0.56 +0.2
2,869,821 - A4249_RS14245 0.56 +0.2
2,869,823 + A4249_RS14245 0.57 -0.2
2,869,823 + A4249_RS14245 0.57 +0.0
2,869,823 + A4249_RS14245 0.57 +0.3
2,869,823 + A4249_RS14245 0.57 +0.0
2,869,823 + A4249_RS14245 0.57 +0.5
2,869,823 + A4249_RS14245 0.57 +0.8
2,869,823 + A4249_RS14245 0.57 +0.3
2,869,823 + A4249_RS14245 0.57 +0.6
2,869,823 + A4249_RS14245 0.57 -0.0
2,869,823 + A4249_RS14245 0.57 -0.2
2,869,823 + A4249_RS14245 0.57 +0.3
2,869,823 + A4249_RS14245 0.57 +1.2
2,869,823 + A4249_RS14245 0.57 -0.1
2,869,823 + A4249_RS14245 0.57 +0.4
2,869,823 + A4249_RS14245 0.57 -0.1
2,869,823 + A4249_RS14245 0.57 -0.1
2,869,823 + A4249_RS14245 0.57 -0.1
2,869,823 + A4249_RS14245 0.57 -0.3
2,869,823 + A4249_RS14245 0.57 -0.1
2,869,823 + A4249_RS14245 0.57 +0.4
2,869,823 + A4249_RS14245 0.57 +0.9
2,869,823 + A4249_RS14245 0.57 +0.3
2,869,823 + A4249_RS14245 0.57 +0.1
2,869,823 + A4249_RS14245 0.57 -0.2
2,869,823 + A4249_RS14245 0.57 +0.0
2,869,823 + A4249_RS14245 0.57 +0.1
2,869,823 + A4249_RS14245 0.57 -0.0
2,869,824 - A4249_RS14245 0.57 -0.2
2,869,824 - A4249_RS14245 0.57 +0.3
2,869,824 - A4249_RS14245 0.57 +0.3
2,869,824 - A4249_RS14245 0.57 +0.8
2,869,824 - A4249_RS14245 0.57 +0.0
2,869,824 - A4249_RS14245 0.57 +0.2
2,869,824 - A4249_RS14245 0.57 +1.2
2,869,824 - A4249_RS14245 0.57 +0.9
2,869,824 - A4249_RS14245 0.57 +0.1
2,869,824 - A4249_RS14245 0.57 +0.4
2,869,824 - A4249_RS14245 0.57 -0.0
2,869,824 - A4249_RS14245 0.57 +0.7
2,869,824 - A4249_RS14245 0.57 +0.4
2,869,877 + A4249_RS14245 0.64 +0.0
2,869,877 + A4249_RS14245 0.64 +0.2
2,869,877 + A4249_RS14245 0.64 +0.4
2,869,877 + A4249_RS14245 0.64 +0.3
2,869,878 - A4249_RS14245 0.64 +0.2
2,869,878 - A4249_RS14245 0.64 -0.0
2,869,953 - A4249_RS14245 0.74 +0.4
2,870,000 + A4249_RS14245 0.80 +0.7
2,870,000 + A4249_RS14245 0.80 +0.3
2,870,000 + A4249_RS14245 0.80 -0.4
2,870,000 + A4249_RS14245 0.80 -0.1
2,870,000 + A4249_RS14245 0.80 -0.3
2,870,001 - A4249_RS14245 0.80 +0.1
2,870,001 - A4249_RS14245 0.80 +0.5
2,870,001 - A4249_RS14245 0.80 -0.1
2,870,049 - A4249_RS14245 0.87 +0.0
2,870,049 - A4249_RS14245 0.87 +0.2
2,870,049 - A4249_RS14245 0.87 +0.0
2,870,049 - A4249_RS14245 0.87 -0.2

Or see this region's nucleotide sequence