Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13985 and A4249_RS13990 are separated by 139 nucleotides A4249_RS13990 and A4249_RS13995 overlap by 1 nucleotides A4249_RS13995 and A4249_RS14000 are separated by 18 nucleotides A4249_RS14000 and A4249_RS14005 are separated by 108 nucleotides
A4249_RS13985: A4249_RS13985 - DUF1993 domain-containing protein, at 2,820,141 to 2,820,635
_RS13985
A4249_RS13990: A4249_RS13990 - ribosome maturation factor RimP, at 2,820,775 to 2,821,374
_RS13990
A4249_RS13995: A4249_RS13995 - transcription termination factor NusA, at 2,821,374 to 2,823,107
_RS13995
A4249_RS14000: A4249_RS14000 - RNA-binding protein, at 2,823,126 to 2,823,785
_RS14000
A4249_RS14005: A4249_RS14005 - translation initiation factor IF-2, at 2,823,894 to 2,826,920
_RS14005
Position (kb)
2821
2822
2823
2824 Strain fitness (log2 ratio)
-2
-1
0
1 at 2820.423 kb on + strand, within A4249_RS13985 at 2820.424 kb on - strand, within A4249_RS13985 at 2820.424 kb on - strand, within A4249_RS13985 at 2820.424 kb on - strand, within A4249_RS13985 at 2820.425 kb on + strand, within A4249_RS13985 at 2820.425 kb on + strand, within A4249_RS13985 at 2820.426 kb on - strand, within A4249_RS13985 at 2820.522 kb on + strand, within A4249_RS13985 at 2820.522 kb on + strand, within A4249_RS13985 at 2820.523 kb on - strand, within A4249_RS13985 at 2820.523 kb on - strand, within A4249_RS13985 at 2820.523 kb on - strand, within A4249_RS13985 at 2820.523 kb on - strand, within A4249_RS13985 at 2820.573 kb on + strand, within A4249_RS13985 at 2820.573 kb on + strand, within A4249_RS13985 at 2820.573 kb on + strand, within A4249_RS13985 at 2820.573 kb on + strand, within A4249_RS13985 at 2820.573 kb on + strand, within A4249_RS13985 at 2820.573 kb on + strand, within A4249_RS13985 at 2820.573 kb on + strand, within A4249_RS13985 at 2820.573 kb on + strand, within A4249_RS13985 at 2820.574 kb on - strand, within A4249_RS13985 at 2820.574 kb on - strand, within A4249_RS13985 at 2820.574 kb on - strand, within A4249_RS13985 at 2820.574 kb on - strand, within A4249_RS13985 at 2820.574 kb on - strand, within A4249_RS13985 at 2820.574 kb on - strand, within A4249_RS13985 at 2820.574 kb on - strand, within A4249_RS13985 at 2820.574 kb on - strand, within A4249_RS13985 at 2820.574 kb on - strand, within A4249_RS13985 at 2820.574 kb on - strand, within A4249_RS13985 at 2820.574 kb on - strand, within A4249_RS13985 at 2820.618 kb on + strand at 2820.618 kb on + strand at 2820.619 kb on - strand at 2820.619 kb on - strand at 2820.619 kb on - strand at 2820.681 kb on + strand at 2820.681 kb on + strand at 2822.985 kb on + strand at 2823.018 kb on + strand at 2823.018 kb on + strand at 2823.019 kb on - strand at 2823.019 kb on - strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.847 kb on + strand at 2823.847 kb on + strand at 2823.850 kb on + strand at 2823.850 kb on + strand at 2823.850 kb on + strand at 2823.850 kb on + strand at 2823.850 kb on + strand at 2823.850 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,820,423 + A4249_RS13985 0.57 -0.3 2,820,424 - A4249_RS13985 0.57 +0.0 2,820,424 - A4249_RS13985 0.57 +0.5 2,820,424 - A4249_RS13985 0.57 +0.4 2,820,425 + A4249_RS13985 0.57 -0.3 2,820,425 + A4249_RS13985 0.57 -0.4 2,820,426 - A4249_RS13985 0.58 -0.8 2,820,522 + A4249_RS13985 0.77 -0.1 2,820,522 + A4249_RS13985 0.77 -0.3 2,820,523 - A4249_RS13985 0.77 -0.0 2,820,523 - A4249_RS13985 0.77 -0.9 2,820,523 - A4249_RS13985 0.77 +0.2 2,820,523 - A4249_RS13985 0.77 -0.4 2,820,573 + A4249_RS13985 0.87 +0.2 2,820,573 + A4249_RS13985 0.87 -0.1 2,820,573 + A4249_RS13985 0.87 -1.0 2,820,573 + A4249_RS13985 0.87 +0.8 2,820,573 + A4249_RS13985 0.87 -0.7 2,820,573 + A4249_RS13985 0.87 -0.1 2,820,573 + A4249_RS13985 0.87 -0.2 2,820,573 + A4249_RS13985 0.87 -0.3 2,820,574 - A4249_RS13985 0.87 +0.1 2,820,574 - A4249_RS13985 0.87 -0.4 2,820,574 - A4249_RS13985 0.87 -0.7 2,820,574 - A4249_RS13985 0.87 -0.6 2,820,574 - A4249_RS13985 0.87 -0.4 2,820,574 - A4249_RS13985 0.87 -0.6 2,820,574 - A4249_RS13985 0.87 -0.9 2,820,574 - A4249_RS13985 0.87 -0.5 2,820,574 - A4249_RS13985 0.87 -0.0 2,820,574 - A4249_RS13985 0.87 -0.9 2,820,574 - A4249_RS13985 0.87 -0.0 2,820,618 + -0.6 2,820,618 + -0.2 2,820,619 - -0.1 2,820,619 - +0.5 2,820,619 - -0.4 2,820,681 + +1.2 2,820,681 + -1.0 2,822,985 + -0.2 2,823,018 + -0.6 2,823,018 + +0.2 2,823,019 - -1.8 2,823,019 - -1.3 2,823,125 + -0.6 2,823,125 + +0.3 2,823,125 + -1.2 2,823,125 + -1.2 2,823,125 + -0.2 2,823,125 + -2.0 2,823,125 + -0.5 2,823,125 + +0.0 2,823,125 + -0.9 2,823,125 + +0.3 2,823,125 + -1.0 2,823,126 - +0.5 2,823,126 - -0.3 2,823,126 - -0.5 2,823,126 - -0.1 2,823,126 - -0.9 2,823,126 - +0.9 2,823,126 - -1.0 2,823,126 - -1.2 2,823,126 - -0.6 2,823,126 - -0.8 2,823,126 - -1.3 2,823,126 - -0.3 2,823,126 - -0.0 2,823,126 - +1.0 2,823,126 - -1.2 2,823,126 - -0.4 2,823,126 - +1.0 2,823,847 + +0.0 2,823,847 + -1.5 2,823,850 + -0.5 2,823,850 + -0.7 2,823,850 + -0.5 2,823,850 + +0.3 2,823,850 + -1.2 2,823,850 + +0.5
Or see this region's nucleotide sequence