Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13955 and A4249_RS13960 are separated by 3 nucleotides A4249_RS13960 and A4249_RS13965 overlap by 4 nucleotides A4249_RS13965 and A4249_RS13970 are separated by 123 nucleotides A4249_RS13970 and A4249_RS13975 overlap by 1 nucleotides
A4249_RS13955: A4249_RS13955 - hypothetical protein, at 2,814,976 to 2,815,434
_RS13955
A4249_RS13960: A4249_RS13960 - alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB, at 2,815,438 to 2,815,842
_RS13960
A4249_RS13965: A4249_RS13965 - YaiI/YqxD family protein, at 2,815,839 to 2,816,297
_RS13965
A4249_RS13970: A4249_RS13970 - amidohydrolase family protein, at 2,816,421 to 2,817,761
_RS13970
A4249_RS13975: A4249_RS13975 - amidohydrolase, at 2,817,761 to 2,819,239
_RS13975
Position (kb)
2816
2817
2818 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2815.545 kb on - strand, within A4249_RS13960 at 2815.545 kb on - strand, within A4249_RS13960 at 2815.800 kb on - strand, within A4249_RS13960 at 2815.800 kb on - strand, within A4249_RS13960 at 2815.938 kb on + strand, within A4249_RS13965 at 2816.070 kb on + strand, within A4249_RS13965 at 2816.070 kb on + strand, within A4249_RS13965 at 2816.070 kb on + strand, within A4249_RS13965 at 2816.070 kb on + strand, within A4249_RS13965 at 2816.070 kb on + strand, within A4249_RS13965 at 2816.070 kb on + strand, within A4249_RS13965 at 2816.071 kb on - strand, within A4249_RS13965 at 2816.071 kb on - strand, within A4249_RS13965 at 2816.071 kb on - strand, within A4249_RS13965 at 2816.071 kb on - strand, within A4249_RS13965 at 2816.071 kb on - strand, within A4249_RS13965 at 2816.071 kb on - strand, within A4249_RS13965 at 2816.098 kb on - strand, within A4249_RS13965 at 2816.098 kb on - strand, within A4249_RS13965 at 2816.098 kb on - strand, within A4249_RS13965 at 2816.209 kb on + strand, within A4249_RS13965 at 2816.209 kb on + strand, within A4249_RS13965 at 2816.209 kb on + strand, within A4249_RS13965 at 2816.209 kb on + strand, within A4249_RS13965 at 2816.209 kb on + strand, within A4249_RS13965 at 2816.209 kb on + strand, within A4249_RS13965 at 2816.209 kb on + strand, within A4249_RS13965 at 2816.209 kb on + strand, within A4249_RS13965 at 2816.209 kb on + strand, within A4249_RS13965 at 2816.209 kb on + strand, within A4249_RS13965 at 2816.209 kb on + strand, within A4249_RS13965 at 2816.209 kb on + strand, within A4249_RS13965 at 2816.210 kb on - strand, within A4249_RS13965 at 2816.210 kb on - strand, within A4249_RS13965 at 2816.210 kb on - strand, within A4249_RS13965 at 2816.210 kb on - strand, within A4249_RS13965 at 2816.210 kb on - strand, within A4249_RS13965 at 2816.210 kb on - strand, within A4249_RS13965 at 2816.210 kb on - strand, within A4249_RS13965 at 2816.242 kb on + strand, within A4249_RS13965 at 2816.242 kb on + strand, within A4249_RS13965 at 2816.242 kb on + strand, within A4249_RS13965 at 2816.242 kb on + strand, within A4249_RS13965 at 2816.242 kb on + strand, within A4249_RS13965 at 2816.242 kb on + strand, within A4249_RS13965 at 2816.243 kb on - strand, within A4249_RS13965 at 2816.281 kb on + strand at 2816.281 kb on + strand at 2816.281 kb on + strand at 2816.281 kb on + strand at 2816.281 kb on + strand at 2816.282 kb on - strand at 2816.282 kb on - strand at 2816.282 kb on - strand at 2816.297 kb on + strand at 2816.297 kb on + strand at 2816.297 kb on + strand at 2816.297 kb on + strand at 2816.298 kb on - strand at 2816.298 kb on - strand at 2816.298 kb on - strand at 2816.298 kb on - strand at 2816.298 kb on - strand at 2816.298 kb on - strand at 2816.311 kb on + strand at 2816.326 kb on + strand at 2816.327 kb on - strand at 2816.327 kb on - strand at 2816.342 kb on + strand at 2816.342 kb on + strand at 2816.342 kb on + strand at 2816.342 kb on + strand at 2816.343 kb on - strand at 2816.343 kb on - strand at 2816.343 kb on - strand at 2816.343 kb on - strand at 2816.431 kb on + strand at 2816.704 kb on + strand, within A4249_RS13970 at 2816.705 kb on - strand, within A4249_RS13970 at 2816.705 kb on - strand, within A4249_RS13970 at 2816.705 kb on - strand, within A4249_RS13970 at 2817.073 kb on + strand, within A4249_RS13970 at 2817.074 kb on - strand, within A4249_RS13970 at 2817.074 kb on - strand, within A4249_RS13970 at 2817.094 kb on + strand, within A4249_RS13970 at 2817.095 kb on - strand, within A4249_RS13970 at 2817.095 kb on - strand, within A4249_RS13970 at 2817.280 kb on + strand, within A4249_RS13970 at 2817.280 kb on + strand, within A4249_RS13970 at 2817.422 kb on - strand, within A4249_RS13970 at 2817.802 kb on - strand at 2817.840 kb on + strand at 2817.841 kb on - strand at 2817.841 kb on - strand at 2817.903 kb on + strand at 2818.266 kb on + strand, within A4249_RS13975 at 2818.267 kb on - strand, within A4249_RS13975 at 2818.267 kb on - strand, within A4249_RS13975 at 2818.353 kb on + strand, within A4249_RS13975 at 2818.473 kb on + strand, within A4249_RS13975 at 2818.473 kb on + strand, within A4249_RS13975 at 2818.474 kb on - strand, within A4249_RS13975 at 2818.474 kb on - strand, within A4249_RS13975 at 2818.474 kb on - strand, within A4249_RS13975 at 2818.474 kb on - strand, within A4249_RS13975 at 2818.474 kb on - strand, within A4249_RS13975 at 2818.513 kb on + strand, within A4249_RS13975 at 2818.513 kb on + strand, within A4249_RS13975 at 2818.514 kb on - strand, within A4249_RS13975 at 2818.514 kb on - strand, within A4249_RS13975 at 2818.554 kb on + strand, within A4249_RS13975 at 2818.554 kb on + strand, within A4249_RS13975 at 2818.554 kb on + strand, within A4249_RS13975 at 2818.555 kb on - strand, within A4249_RS13975 at 2818.555 kb on - strand, within A4249_RS13975 at 2818.555 kb on - strand, within A4249_RS13975 at 2818.555 kb on - strand, within A4249_RS13975 at 2818.594 kb on + strand, within A4249_RS13975 at 2818.594 kb on + strand, within A4249_RS13975 at 2818.594 kb on + strand, within A4249_RS13975 at 2818.594 kb on + strand, within A4249_RS13975 at 2818.594 kb on + strand, within A4249_RS13975 at 2818.595 kb on - strand, within A4249_RS13975 at 2818.595 kb on - strand, within A4249_RS13975 at 2818.596 kb on + strand, within A4249_RS13975 at 2818.596 kb on + strand, within A4249_RS13975 at 2818.596 kb on + strand, within A4249_RS13975 at 2818.597 kb on - strand, within A4249_RS13975 at 2818.597 kb on - strand, within A4249_RS13975 at 2818.597 kb on - strand, within A4249_RS13975 at 2818.597 kb on - strand, within A4249_RS13975
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,815,545 - A4249_RS13960 0.26 +0.0 2,815,545 - A4249_RS13960 0.26 +1.5 2,815,800 - A4249_RS13960 0.89 -0.1 2,815,800 - A4249_RS13960 0.89 +0.1 2,815,938 + A4249_RS13965 0.22 +1.2 2,816,070 + A4249_RS13965 0.50 +0.0 2,816,070 + A4249_RS13965 0.50 +0.2 2,816,070 + A4249_RS13965 0.50 -1.3 2,816,070 + A4249_RS13965 0.50 +0.1 2,816,070 + A4249_RS13965 0.50 -0.8 2,816,070 + A4249_RS13965 0.50 +0.3 2,816,071 - A4249_RS13965 0.51 -0.4 2,816,071 - A4249_RS13965 0.51 -0.8 2,816,071 - A4249_RS13965 0.51 -0.6 2,816,071 - A4249_RS13965 0.51 +0.7 2,816,071 - A4249_RS13965 0.51 -0.1 2,816,071 - A4249_RS13965 0.51 +0.6 2,816,098 - A4249_RS13965 0.56 -0.3 2,816,098 - A4249_RS13965 0.56 -0.0 2,816,098 - A4249_RS13965 0.56 -1.0 2,816,209 + A4249_RS13965 0.81 +0.2 2,816,209 + A4249_RS13965 0.81 -0.1 2,816,209 + A4249_RS13965 0.81 -0.8 2,816,209 + A4249_RS13965 0.81 +0.6 2,816,209 + A4249_RS13965 0.81 -0.4 2,816,209 + A4249_RS13965 0.81 -0.9 2,816,209 + A4249_RS13965 0.81 +0.0 2,816,209 + A4249_RS13965 0.81 +0.1 2,816,209 + A4249_RS13965 0.81 +0.1 2,816,209 + A4249_RS13965 0.81 +0.0 2,816,209 + A4249_RS13965 0.81 +0.3 2,816,209 + A4249_RS13965 0.81 +0.2 2,816,210 - A4249_RS13965 0.81 -0.4 2,816,210 - A4249_RS13965 0.81 +0.4 2,816,210 - A4249_RS13965 0.81 -0.5 2,816,210 - A4249_RS13965 0.81 +0.1 2,816,210 - A4249_RS13965 0.81 +1.2 2,816,210 - A4249_RS13965 0.81 -0.6 2,816,210 - A4249_RS13965 0.81 -0.6 2,816,242 + A4249_RS13965 0.88 -0.3 2,816,242 + A4249_RS13965 0.88 -0.9 2,816,242 + A4249_RS13965 0.88 -0.7 2,816,242 + A4249_RS13965 0.88 -0.8 2,816,242 + A4249_RS13965 0.88 -0.5 2,816,242 + A4249_RS13965 0.88 +0.0 2,816,243 - A4249_RS13965 0.88 -0.2 2,816,281 + -0.2 2,816,281 + -0.8 2,816,281 + -0.3 2,816,281 + -0.5 2,816,281 + -0.3 2,816,282 - -0.2 2,816,282 - -1.1 2,816,282 - -0.1 2,816,297 + +0.6 2,816,297 + -1.2 2,816,297 + -0.6 2,816,297 + -0.7 2,816,298 - +0.7 2,816,298 - -0.5 2,816,298 - +0.2 2,816,298 - +0.0 2,816,298 - +0.1 2,816,298 - -0.6 2,816,311 + +0.3 2,816,326 + -0.0 2,816,327 - -0.2 2,816,327 - -0.4 2,816,342 + -0.5 2,816,342 + -0.2 2,816,342 + -0.2 2,816,342 + +1.4 2,816,343 - +1.8 2,816,343 - -1.4 2,816,343 - -1.4 2,816,343 - -0.2 2,816,431 + -0.3 2,816,704 + A4249_RS13970 0.21 -0.5 2,816,705 - A4249_RS13970 0.21 -0.2 2,816,705 - A4249_RS13970 0.21 -0.6 2,816,705 - A4249_RS13970 0.21 -1.3 2,817,073 + A4249_RS13970 0.49 +0.2 2,817,074 - A4249_RS13970 0.49 -1.3 2,817,074 - A4249_RS13970 0.49 +0.0 2,817,094 + A4249_RS13970 0.50 +0.6 2,817,095 - A4249_RS13970 0.50 -0.1 2,817,095 - A4249_RS13970 0.50 -0.1 2,817,280 + A4249_RS13970 0.64 -1.2 2,817,280 + A4249_RS13970 0.64 -0.3 2,817,422 - A4249_RS13970 0.75 -1.5 2,817,802 - +0.1 2,817,840 + -0.1 2,817,841 - -0.1 2,817,841 - -0.3 2,817,903 + +0.3 2,818,266 + A4249_RS13975 0.34 +1.1 2,818,267 - A4249_RS13975 0.34 -1.5 2,818,267 - A4249_RS13975 0.34 -1.9 2,818,353 + A4249_RS13975 0.40 -1.0 2,818,473 + A4249_RS13975 0.48 -1.4 2,818,473 + A4249_RS13975 0.48 -0.1 2,818,474 - A4249_RS13975 0.48 -1.8 2,818,474 - A4249_RS13975 0.48 +0.6 2,818,474 - A4249_RS13975 0.48 -1.4 2,818,474 - A4249_RS13975 0.48 +0.4 2,818,474 - A4249_RS13975 0.48 -0.2 2,818,513 + A4249_RS13975 0.51 +1.1 2,818,513 + A4249_RS13975 0.51 -0.3 2,818,514 - A4249_RS13975 0.51 -0.2 2,818,514 - A4249_RS13975 0.51 -0.2 2,818,554 + A4249_RS13975 0.54 -1.8 2,818,554 + A4249_RS13975 0.54 -0.3 2,818,554 + A4249_RS13975 0.54 +0.9 2,818,555 - A4249_RS13975 0.54 -0.2 2,818,555 - A4249_RS13975 0.54 -0.4 2,818,555 - A4249_RS13975 0.54 +0.1 2,818,555 - A4249_RS13975 0.54 +0.5 2,818,594 + A4249_RS13975 0.56 +0.2 2,818,594 + A4249_RS13975 0.56 +0.1 2,818,594 + A4249_RS13975 0.56 -0.9 2,818,594 + A4249_RS13975 0.56 -0.1 2,818,594 + A4249_RS13975 0.56 -1.0 2,818,595 - A4249_RS13975 0.56 -0.1 2,818,595 - A4249_RS13975 0.56 -0.5 2,818,596 + A4249_RS13975 0.56 +0.4 2,818,596 + A4249_RS13975 0.56 -0.2 2,818,596 + A4249_RS13975 0.56 +0.9 2,818,597 - A4249_RS13975 0.57 -0.1 2,818,597 - A4249_RS13975 0.57 -0.1 2,818,597 - A4249_RS13975 0.57 +0.1 2,818,597 - A4249_RS13975 0.57 -0.3
Or see this region's nucleotide sequence