Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13550 and A4249_RS13555 overlap by 2 nucleotides A4249_RS13555 and A4249_RS13560 are separated by 72 nucleotides A4249_RS13560 and A4249_RS13565 are separated by 3 nucleotides A4249_RS13565 and A4249_RS13570 are separated by 6 nucleotides
A4249_RS13550: A4249_RS13550 - methyltransferase domain-containing protein, at 2,739,214 to 2,740,116
_RS13550
A4249_RS13555: A4249_RS13555 - ComF family protein, at 2,740,115 to 2,740,909
_RS13555
A4249_RS13560: A4249_RS13560 - glutaredoxin 3, at 2,740,982 to 2,741,239
_RS13560
A4249_RS13565: A4249_RS13565 - carbon-nitrogen hydrolase family protein, at 2,741,243 to 2,742,082
_RS13565
A4249_RS13570: A4249_RS13570 - DUF1178 family protein, at 2,742,089 to 2,742,523
_RS13570
Position (kb)
2740
2741
2742 Strain fitness (log2 ratio)
-2
-1
0
1 at 2740.288 kb on - strand, within A4249_RS13555 at 2740.369 kb on + strand, within A4249_RS13555 at 2740.383 kb on - strand, within A4249_RS13555 at 2740.383 kb on - strand, within A4249_RS13555 at 2740.415 kb on + strand, within A4249_RS13555 at 2740.415 kb on + strand, within A4249_RS13555 at 2740.415 kb on + strand, within A4249_RS13555 at 2740.415 kb on + strand, within A4249_RS13555 at 2740.415 kb on + strand, within A4249_RS13555 at 2740.415 kb on + strand, within A4249_RS13555 at 2740.416 kb on - strand, within A4249_RS13555 at 2740.416 kb on - strand, within A4249_RS13555 at 2740.637 kb on + strand, within A4249_RS13555 at 2740.637 kb on + strand, within A4249_RS13555 at 2740.638 kb on - strand, within A4249_RS13555 at 2740.638 kb on - strand, within A4249_RS13555 at 2740.903 kb on + strand at 2740.903 kb on + strand at 2740.903 kb on + strand at 2740.904 kb on - strand at 2740.904 kb on - strand at 2740.904 kb on - strand at 2740.904 kb on - strand at 2740.964 kb on + strand at 2740.965 kb on - strand at 2740.965 kb on - strand at 2741.000 kb on + strand at 2741.000 kb on + strand at 2741.001 kb on - strand at 2741.001 kb on - strand at 2741.022 kb on - strand, within A4249_RS13560 at 2741.066 kb on + strand, within A4249_RS13560 at 2741.066 kb on + strand, within A4249_RS13560 at 2741.066 kb on + strand, within A4249_RS13560 at 2741.066 kb on + strand, within A4249_RS13560 at 2741.066 kb on + strand, within A4249_RS13560 at 2741.067 kb on - strand, within A4249_RS13560 at 2741.067 kb on - strand, within A4249_RS13560 at 2741.067 kb on - strand, within A4249_RS13560 at 2741.068 kb on + strand, within A4249_RS13560 at 2741.380 kb on + strand, within A4249_RS13565 at 2741.380 kb on + strand, within A4249_RS13565 at 2741.380 kb on + strand, within A4249_RS13565 at 2741.380 kb on + strand, within A4249_RS13565 at 2741.380 kb on + strand, within A4249_RS13565 at 2741.380 kb on + strand, within A4249_RS13565 at 2741.380 kb on + strand, within A4249_RS13565 at 2741.381 kb on - strand, within A4249_RS13565 at 2741.381 kb on - strand, within A4249_RS13565 at 2741.381 kb on - strand, within A4249_RS13565 at 2741.381 kb on - strand, within A4249_RS13565 at 2741.639 kb on + strand, within A4249_RS13565 at 2741.639 kb on + strand, within A4249_RS13565 at 2741.639 kb on + strand, within A4249_RS13565 at 2741.639 kb on + strand, within A4249_RS13565 at 2741.640 kb on - strand, within A4249_RS13565 at 2741.640 kb on - strand, within A4249_RS13565 at 2741.723 kb on + strand, within A4249_RS13565 at 2742.158 kb on + strand, within A4249_RS13570 at 2742.159 kb on - strand, within A4249_RS13570
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,740,288 - A4249_RS13555 0.22 +0.4 2,740,369 + A4249_RS13555 0.32 -0.9 2,740,383 - A4249_RS13555 0.34 +0.4 2,740,383 - A4249_RS13555 0.34 -0.1 2,740,415 + A4249_RS13555 0.38 +0.2 2,740,415 + A4249_RS13555 0.38 +0.2 2,740,415 + A4249_RS13555 0.38 +0.2 2,740,415 + A4249_RS13555 0.38 -1.4 2,740,415 + A4249_RS13555 0.38 +0.1 2,740,415 + A4249_RS13555 0.38 +0.2 2,740,416 - A4249_RS13555 0.38 +0.6 2,740,416 - A4249_RS13555 0.38 -0.4 2,740,637 + A4249_RS13555 0.66 -0.7 2,740,637 + A4249_RS13555 0.66 -0.2 2,740,638 - A4249_RS13555 0.66 +0.0 2,740,638 - A4249_RS13555 0.66 -0.7 2,740,903 + +0.3 2,740,903 + -0.2 2,740,903 + -1.1 2,740,904 - -0.7 2,740,904 - +1.0 2,740,904 - -0.1 2,740,904 - +0.1 2,740,964 + +0.2 2,740,965 - -2.4 2,740,965 - +1.0 2,741,000 + +0.4 2,741,000 + -1.1 2,741,001 - +0.1 2,741,001 - -0.4 2,741,022 - A4249_RS13560 0.16 -1.0 2,741,066 + A4249_RS13560 0.33 -0.5 2,741,066 + A4249_RS13560 0.33 -1.0 2,741,066 + A4249_RS13560 0.33 +1.2 2,741,066 + A4249_RS13560 0.33 -1.3 2,741,066 + A4249_RS13560 0.33 +1.1 2,741,067 - A4249_RS13560 0.33 -1.3 2,741,067 - A4249_RS13560 0.33 -1.9 2,741,067 - A4249_RS13560 0.33 +0.0 2,741,068 + A4249_RS13560 0.33 +0.8 2,741,380 + A4249_RS13565 0.16 -0.5 2,741,380 + A4249_RS13565 0.16 -0.2 2,741,380 + A4249_RS13565 0.16 -0.6 2,741,380 + A4249_RS13565 0.16 +0.6 2,741,380 + A4249_RS13565 0.16 -0.0 2,741,380 + A4249_RS13565 0.16 +0.2 2,741,380 + A4249_RS13565 0.16 -0.2 2,741,381 - A4249_RS13565 0.16 -0.4 2,741,381 - A4249_RS13565 0.16 -0.6 2,741,381 - A4249_RS13565 0.16 +1.0 2,741,381 - A4249_RS13565 0.16 +0.5 2,741,639 + A4249_RS13565 0.47 -0.9 2,741,639 + A4249_RS13565 0.47 +0.0 2,741,639 + A4249_RS13565 0.47 -0.2 2,741,639 + A4249_RS13565 0.47 -0.7 2,741,640 - A4249_RS13565 0.47 +0.1 2,741,640 - A4249_RS13565 0.47 +0.2 2,741,723 + A4249_RS13565 0.57 +1.3 2,742,158 + A4249_RS13570 0.16 -0.5 2,742,159 - A4249_RS13570 0.16 -0.5
Or see this region's nucleotide sequence