Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13010

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13000 and A4249_RS13005 overlap by 19 nucleotidesA4249_RS13005 and A4249_RS13010 are separated by 65 nucleotidesA4249_RS13010 and A4249_RS16670 are separated by 56 nucleotidesA4249_RS16670 and A4249_RS13015 are separated by 202 nucleotides A4249_RS13000: A4249_RS13000 - ATP-binding cassette domain-containing protein, at 2,608,081 to 2,608,761 _RS13000 A4249_RS13005: A4249_RS13005 - hypothetical protein, at 2,608,743 to 2,609,663 _RS13005 A4249_RS13010: A4249_RS13010 - FkbM family methyltransferase, at 2,609,729 to 2,610,640 _RS13010 A4249_RS16670: A4249_RS16670 - hypothetical protein, at 2,610,697 to 2,611,095 _RS16670 A4249_RS13015: A4249_RS13015 - glycosyltransferase, at 2,611,298 to 2,614,192 _RS13015 Position (kb) 2609 2610 2611Strain fitness (log2 ratio) -2 -1 0 1 2at 2609.680 kb on + strandat 2609.680 kb on + strandat 2609.680 kb on + strandat 2609.790 kb on + strandat 2609.790 kb on + strandat 2609.790 kb on + strandat 2609.827 kb on - strand, within A4249_RS13010at 2609.924 kb on + strand, within A4249_RS13010at 2609.925 kb on - strand, within A4249_RS13010at 2609.925 kb on - strand, within A4249_RS13010at 2609.929 kb on - strand, within A4249_RS13010at 2609.929 kb on - strand, within A4249_RS13010at 2609.931 kb on - strand, within A4249_RS13010at 2609.931 kb on - strand, within A4249_RS13010at 2609.999 kb on + strand, within A4249_RS13010at 2610.016 kb on + strand, within A4249_RS13010at 2610.037 kb on + strand, within A4249_RS13010at 2610.038 kb on - strand, within A4249_RS13010at 2610.068 kb on + strand, within A4249_RS13010at 2610.069 kb on - strand, within A4249_RS13010at 2610.069 kb on - strand, within A4249_RS13010at 2610.069 kb on - strand, within A4249_RS13010at 2610.347 kb on - strand, within A4249_RS13010at 2610.347 kb on - strand, within A4249_RS13010at 2610.415 kb on + strand, within A4249_RS13010at 2610.416 kb on - strand, within A4249_RS13010at 2610.416 kb on - strand, within A4249_RS13010at 2610.416 kb on - strand, within A4249_RS13010at 2610.416 kb on - strand, within A4249_RS13010at 2610.416 kb on - strand, within A4249_RS13010at 2610.416 kb on - strand, within A4249_RS13010at 2610.416 kb on - strand, within A4249_RS13010at 2610.435 kb on + strand, within A4249_RS13010at 2610.436 kb on - strand, within A4249_RS13010at 2610.436 kb on - strand, within A4249_RS13010at 2610.436 kb on - strand, within A4249_RS13010at 2610.436 kb on - strand, within A4249_RS13010at 2610.436 kb on - strand, within A4249_RS13010at 2610.436 kb on - strand, within A4249_RS13010at 2610.524 kb on - strand, within A4249_RS13010at 2610.543 kb on - strand, within A4249_RS13010at 2610.558 kb on + strandat 2610.559 kb on - strandat 2610.559 kb on - strandat 2610.572 kb on - strandat 2610.604 kb on - strandat 2610.604 kb on - strandat 2610.604 kb on - strandat 2610.604 kb on - strandat 2610.604 kb on - strandat 2610.604 kb on - strandat 2610.627 kb on - strandat 2610.627 kb on - strandat 2610.627 kb on - strandat 2610.656 kb on + strandat 2610.656 kb on + strandat 2610.656 kb on + strandat 2610.657 kb on - strandat 2610.658 kb on + strandat 2610.658 kb on + strandat 2610.658 kb on + strandat 2610.658 kb on + strandat 2610.658 kb on + strandat 2610.658 kb on + strandat 2610.658 kb on + strandat 2610.658 kb on + strandat 2610.658 kb on + strandat 2610.658 kb on + strandat 2610.658 kb on + strandat 2610.658 kb on + strandat 2610.659 kb on - strandat 2610.659 kb on - strandat 2610.659 kb on - strandat 2610.659 kb on - strandat 2610.659 kb on - strandat 2610.659 kb on - strandat 2610.659 kb on - strandat 2610.877 kb on + strand, within A4249_RS16670at 2610.877 kb on + strand, within A4249_RS16670at 2610.878 kb on - strand, within A4249_RS16670at 2610.879 kb on + strand, within A4249_RS16670at 2610.879 kb on + strand, within A4249_RS16670at 2610.879 kb on + strand, within A4249_RS16670at 2610.879 kb on + strand, within A4249_RS16670at 2610.880 kb on - strand, within A4249_RS16670at 2610.912 kb on - strand, within A4249_RS16670at 2610.935 kb on + strand, within A4249_RS16670at 2610.935 kb on + strand, within A4249_RS16670at 2610.939 kb on - strand, within A4249_RS16670at 2611.012 kb on - strand, within A4249_RS16670at 2611.013 kb on + strand, within A4249_RS16670at 2611.013 kb on + strand, within A4249_RS16670at 2611.013 kb on + strand, within A4249_RS16670at 2611.013 kb on + strand, within A4249_RS16670at 2611.013 kb on + strand, within A4249_RS16670at 2611.013 kb on + strand, within A4249_RS16670at 2611.013 kb on + strand, within A4249_RS16670at 2611.013 kb on + strand, within A4249_RS16670at 2611.013 kb on + strand, within A4249_RS16670at 2611.014 kb on - strand, within A4249_RS16670at 2611.014 kb on - strand, within A4249_RS16670at 2611.014 kb on - strand, within A4249_RS16670at 2611.014 kb on - strand, within A4249_RS16670at 2611.014 kb on - strand, within A4249_RS16670at 2611.035 kb on - strand, within A4249_RS16670at 2611.035 kb on - strand, within A4249_RS16670at 2611.102 kb on + strandat 2611.103 kb on - strandat 2611.122 kb on + strandat 2611.133 kb on + strandat 2611.133 kb on + strandat 2611.162 kb on + strandat 2611.200 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,609,680 + -0.6
2,609,680 + -1.1
2,609,680 + +0.2
2,609,790 + +1.4
2,609,790 + -0.2
2,609,790 + -0.0
2,609,827 - A4249_RS13010 0.11 +0.0
2,609,924 + A4249_RS13010 0.21 -0.1
2,609,925 - A4249_RS13010 0.21 -0.5
2,609,925 - A4249_RS13010 0.21 +1.1
2,609,929 - A4249_RS13010 0.22 -1.5
2,609,929 - A4249_RS13010 0.22 -0.4
2,609,931 - A4249_RS13010 0.22 +0.8
2,609,931 - A4249_RS13010 0.22 -0.0
2,609,999 + A4249_RS13010 0.30 +0.5
2,610,016 + A4249_RS13010 0.31 +1.1
2,610,037 + A4249_RS13010 0.34 +0.0
2,610,038 - A4249_RS13010 0.34 +0.2
2,610,068 + A4249_RS13010 0.37 -0.2
2,610,069 - A4249_RS13010 0.37 +2.3
2,610,069 - A4249_RS13010 0.37 +0.2
2,610,069 - A4249_RS13010 0.37 -1.5
2,610,347 - A4249_RS13010 0.68 -2.1
2,610,347 - A4249_RS13010 0.68 -2.3
2,610,415 + A4249_RS13010 0.75 -1.0
2,610,416 - A4249_RS13010 0.75 +0.1
2,610,416 - A4249_RS13010 0.75 -0.7
2,610,416 - A4249_RS13010 0.75 +0.1
2,610,416 - A4249_RS13010 0.75 +0.0
2,610,416 - A4249_RS13010 0.75 +0.2
2,610,416 - A4249_RS13010 0.75 -0.5
2,610,416 - A4249_RS13010 0.75 -0.2
2,610,435 + A4249_RS13010 0.77 -0.2
2,610,436 - A4249_RS13010 0.78 +0.0
2,610,436 - A4249_RS13010 0.78 +0.0
2,610,436 - A4249_RS13010 0.78 -0.0
2,610,436 - A4249_RS13010 0.78 +0.1
2,610,436 - A4249_RS13010 0.78 +0.6
2,610,436 - A4249_RS13010 0.78 -0.2
2,610,524 - A4249_RS13010 0.87 -1.0
2,610,543 - A4249_RS13010 0.89 -1.3
2,610,558 + +0.2
2,610,559 - -0.5
2,610,559 - -0.3
2,610,572 - -0.4
2,610,604 - -0.2
2,610,604 - -0.5
2,610,604 - -0.0
2,610,604 - +0.1
2,610,604 - -1.8
2,610,604 - +0.9
2,610,627 - +0.1
2,610,627 - -0.2
2,610,627 - -1.3
2,610,656 + +0.0
2,610,656 + +0.3
2,610,656 + -0.1
2,610,657 - +0.1
2,610,658 + -0.1
2,610,658 + +0.2
2,610,658 + +0.2
2,610,658 + +0.3
2,610,658 + -0.2
2,610,658 + +1.2
2,610,658 + -0.4
2,610,658 + -0.2
2,610,658 + -0.9
2,610,658 + -0.1
2,610,658 + -0.3
2,610,658 + -1.6
2,610,659 - -0.4
2,610,659 - +0.2
2,610,659 - +0.1
2,610,659 - +0.1
2,610,659 - -0.1
2,610,659 - +0.0
2,610,659 - -0.2
2,610,877 + A4249_RS16670 0.45 +0.1
2,610,877 + A4249_RS16670 0.45 -0.1
2,610,878 - A4249_RS16670 0.45 -0.1
2,610,879 + A4249_RS16670 0.46 +0.4
2,610,879 + A4249_RS16670 0.46 +0.2
2,610,879 + A4249_RS16670 0.46 -0.0
2,610,879 + A4249_RS16670 0.46 +1.1
2,610,880 - A4249_RS16670 0.46 +0.7
2,610,912 - A4249_RS16670 0.54 +0.1
2,610,935 + A4249_RS16670 0.60 +0.9
2,610,935 + A4249_RS16670 0.60 +0.1
2,610,939 - A4249_RS16670 0.61 +0.6
2,611,012 - A4249_RS16670 0.79 +1.0
2,611,013 + A4249_RS16670 0.79 +0.8
2,611,013 + A4249_RS16670 0.79 -0.0
2,611,013 + A4249_RS16670 0.79 -0.1
2,611,013 + A4249_RS16670 0.79 -0.1
2,611,013 + A4249_RS16670 0.79 -2.3
2,611,013 + A4249_RS16670 0.79 -1.1
2,611,013 + A4249_RS16670 0.79 -0.2
2,611,013 + A4249_RS16670 0.79 -1.8
2,611,013 + A4249_RS16670 0.79 -0.5
2,611,014 - A4249_RS16670 0.79 +0.7
2,611,014 - A4249_RS16670 0.79 -1.2
2,611,014 - A4249_RS16670 0.79 +0.8
2,611,014 - A4249_RS16670 0.79 -0.2
2,611,014 - A4249_RS16670 0.79 +0.2
2,611,035 - A4249_RS16670 0.85 -0.3
2,611,035 - A4249_RS16670 0.85 -0.7
2,611,102 + -0.7
2,611,103 - -0.5
2,611,122 + +0.1
2,611,133 + +0.5
2,611,133 + -0.8
2,611,162 + -0.9
2,611,200 + -0.1

Or see this region's nucleotide sequence