Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12275 and A4249_RS12280 overlap by 4 nucleotides A4249_RS12280 and A4249_RS12285 are separated by 3 nucleotides
A4249_RS12275: A4249_RS12275 - cobaltochelatase subunit CobT, at 2,462,936 to 2,464,819
_RS12275
A4249_RS12280: A4249_RS12280 - esterase-like activity of phytase family protein, at 2,464,816 to 2,465,790
_RS12280
A4249_RS12285: A4249_RS12285 - trehalose-6-phosphate synthase, at 2,465,794 to 2,467,206
_RS12285
Position (kb)
2464
2465
2466 Strain fitness (log2 ratio)
-2
-1
0
1 at 2463.858 kb on - strand, within A4249_RS12275 at 2464.379 kb on + strand, within A4249_RS12275 at 2464.379 kb on + strand, within A4249_RS12275 at 2464.379 kb on + strand, within A4249_RS12275 at 2464.379 kb on + strand, within A4249_RS12275 at 2464.379 kb on + strand, within A4249_RS12275 at 2464.380 kb on - strand, within A4249_RS12275 at 2464.380 kb on - strand, within A4249_RS12275 at 2464.380 kb on - strand, within A4249_RS12275 at 2464.380 kb on - strand, within A4249_RS12275 at 2464.380 kb on - strand, within A4249_RS12275 at 2464.380 kb on - strand, within A4249_RS12275 at 2464.380 kb on - strand, within A4249_RS12275 at 2464.589 kb on + strand, within A4249_RS12275 at 2465.303 kb on - strand, within A4249_RS12280 at 2465.303 kb on - strand, within A4249_RS12280 at 2465.303 kb on - strand, within A4249_RS12280 at 2465.303 kb on - strand, within A4249_RS12280 at 2465.303 kb on - strand, within A4249_RS12280 at 2465.510 kb on - strand, within A4249_RS12280 at 2465.686 kb on - strand, within A4249_RS12280 at 2465.722 kb on + strand at 2465.722 kb on + strand at 2465.722 kb on + strand at 2465.722 kb on + strand at 2465.722 kb on + strand at 2465.722 kb on + strand at 2465.722 kb on + strand at 2465.722 kb on + strand at 2465.722 kb on + strand at 2465.722 kb on + strand at 2465.722 kb on + strand at 2465.722 kb on + strand at 2465.723 kb on - strand at 2465.723 kb on - strand at 2465.723 kb on - strand at 2465.723 kb on - strand at 2465.723 kb on - strand at 2465.723 kb on - strand at 2465.723 kb on - strand at 2465.723 kb on - strand at 2465.723 kb on - strand at 2465.723 kb on - strand at 2465.723 kb on - strand at 2465.788 kb on + strand at 2465.789 kb on - strand at 2465.789 kb on - strand at 2465.789 kb on - strand at 2465.987 kb on + strand, within A4249_RS12285 at 2465.987 kb on + strand, within A4249_RS12285 at 2465.987 kb on + strand, within A4249_RS12285 at 2465.987 kb on + strand, within A4249_RS12285 at 2466.086 kb on + strand, within A4249_RS12285 at 2466.086 kb on + strand, within A4249_RS12285 at 2466.086 kb on + strand, within A4249_RS12285 at 2466.086 kb on + strand, within A4249_RS12285 at 2466.086 kb on + strand, within A4249_RS12285 at 2466.086 kb on + strand, within A4249_RS12285 at 2466.086 kb on + strand, within A4249_RS12285 at 2466.086 kb on + strand, within A4249_RS12285 at 2466.086 kb on + strand, within A4249_RS12285 at 2466.087 kb on - strand, within A4249_RS12285 at 2466.087 kb on - strand, within A4249_RS12285 at 2466.152 kb on + strand, within A4249_RS12285 at 2466.152 kb on + strand, within A4249_RS12285 at 2466.152 kb on + strand, within A4249_RS12285 at 2466.152 kb on + strand, within A4249_RS12285 at 2466.152 kb on + strand, within A4249_RS12285 at 2466.153 kb on - strand, within A4249_RS12285 at 2466.153 kb on - strand, within A4249_RS12285 at 2466.153 kb on - strand, within A4249_RS12285 at 2466.179 kb on + strand, within A4249_RS12285 at 2466.179 kb on + strand, within A4249_RS12285 at 2466.180 kb on - strand, within A4249_RS12285 at 2466.180 kb on - strand, within A4249_RS12285 at 2466.180 kb on - strand, within A4249_RS12285 at 2466.195 kb on - strand, within A4249_RS12285 at 2466.270 kb on + strand, within A4249_RS12285 at 2466.270 kb on + strand, within A4249_RS12285 at 2466.278 kb on + strand, within A4249_RS12285 at 2466.278 kb on + strand, within A4249_RS12285 at 2466.278 kb on + strand, within A4249_RS12285 at 2466.278 kb on + strand, within A4249_RS12285 at 2466.279 kb on - strand, within A4249_RS12285 at 2466.279 kb on - strand, within A4249_RS12285 at 2466.279 kb on - strand, within A4249_RS12285 at 2466.279 kb on - strand, within A4249_RS12285 at 2466.368 kb on + strand, within A4249_RS12285 at 2466.368 kb on + strand, within A4249_RS12285 at 2466.402 kb on - strand, within A4249_RS12285 at 2466.402 kb on - strand, within A4249_RS12285 at 2466.402 kb on - strand, within A4249_RS12285 at 2466.402 kb on - strand, within A4249_RS12285 at 2466.402 kb on - strand, within A4249_RS12285 at 2466.464 kb on + strand, within A4249_RS12285 at 2466.464 kb on + strand, within A4249_RS12285 at 2466.464 kb on + strand, within A4249_RS12285 at 2466.464 kb on + strand, within A4249_RS12285 at 2466.464 kb on + strand, within A4249_RS12285 at 2466.464 kb on + strand, within A4249_RS12285 at 2466.464 kb on + strand, within A4249_RS12285 at 2466.465 kb on - strand, within A4249_RS12285 at 2466.465 kb on - strand, within A4249_RS12285 at 2466.465 kb on - strand, within A4249_RS12285 at 2466.465 kb on - strand, within A4249_RS12285 at 2466.465 kb on - strand, within A4249_RS12285 at 2466.465 kb on - strand, within A4249_RS12285 at 2466.465 kb on - strand, within A4249_RS12285 at 2466.465 kb on - strand, within A4249_RS12285 at 2466.465 kb on - strand, within A4249_RS12285 at 2466.611 kb on + strand, within A4249_RS12285 at 2466.611 kb on + strand, within A4249_RS12285 at 2466.611 kb on + strand, within A4249_RS12285 at 2466.611 kb on + strand, within A4249_RS12285 at 2466.611 kb on + strand, within A4249_RS12285 at 2466.611 kb on + strand, within A4249_RS12285 at 2466.612 kb on - strand, within A4249_RS12285 at 2466.612 kb on - strand, within A4249_RS12285 at 2466.612 kb on - strand, within A4249_RS12285 at 2466.612 kb on - strand, within A4249_RS12285 at 2466.612 kb on - strand, within A4249_RS12285 at 2466.612 kb on - strand, within A4249_RS12285 at 2466.612 kb on - strand, within A4249_RS12285 at 2466.612 kb on - strand, within A4249_RS12285 at 2466.612 kb on - strand, within A4249_RS12285 at 2466.735 kb on + strand, within A4249_RS12285 at 2466.735 kb on + strand, within A4249_RS12285 at 2466.735 kb on + strand, within A4249_RS12285 at 2466.735 kb on + strand, within A4249_RS12285 at 2466.735 kb on + strand, within A4249_RS12285 at 2466.735 kb on + strand, within A4249_RS12285 at 2466.735 kb on + strand, within A4249_RS12285 at 2466.735 kb on + strand, within A4249_RS12285 at 2466.736 kb on - strand, within A4249_RS12285 at 2466.736 kb on - strand, within A4249_RS12285 at 2466.736 kb on - strand, within A4249_RS12285 at 2466.736 kb on - strand, within A4249_RS12285 at 2466.736 kb on - strand, within A4249_RS12285 at 2466.736 kb on - strand, within A4249_RS12285 at 2466.736 kb on - strand, within A4249_RS12285
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,463,858 - A4249_RS12275 0.49 +1.1 2,464,379 + A4249_RS12275 0.77 +0.2 2,464,379 + A4249_RS12275 0.77 -0.3 2,464,379 + A4249_RS12275 0.77 +1.2 2,464,379 + A4249_RS12275 0.77 -1.0 2,464,379 + A4249_RS12275 0.77 +0.2 2,464,380 - A4249_RS12275 0.77 -0.2 2,464,380 - A4249_RS12275 0.77 -0.9 2,464,380 - A4249_RS12275 0.77 +0.2 2,464,380 - A4249_RS12275 0.77 -1.5 2,464,380 - A4249_RS12275 0.77 +0.2 2,464,380 - A4249_RS12275 0.77 +1.4 2,464,380 - A4249_RS12275 0.77 -0.1 2,464,589 + A4249_RS12275 0.88 -0.6 2,465,303 - A4249_RS12280 0.50 +0.1 2,465,303 - A4249_RS12280 0.50 -0.5 2,465,303 - A4249_RS12280 0.50 +0.3 2,465,303 - A4249_RS12280 0.50 +0.1 2,465,303 - A4249_RS12280 0.50 +0.0 2,465,510 - A4249_RS12280 0.71 +0.5 2,465,686 - A4249_RS12280 0.89 -0.1 2,465,722 + +0.1 2,465,722 + +1.1 2,465,722 + +0.3 2,465,722 + +0.3 2,465,722 + +0.4 2,465,722 + +1.1 2,465,722 + +0.7 2,465,722 + +1.2 2,465,722 + -0.1 2,465,722 + +0.7 2,465,722 + +1.1 2,465,722 + +1.0 2,465,723 - -0.0 2,465,723 - -0.4 2,465,723 - -0.2 2,465,723 - +1.0 2,465,723 - +1.2 2,465,723 - -0.4 2,465,723 - -0.4 2,465,723 - +0.6 2,465,723 - +0.1 2,465,723 - -1.0 2,465,723 - -0.6 2,465,788 + -1.2 2,465,789 - -0.5 2,465,789 - -1.9 2,465,789 - -0.3 2,465,987 + A4249_RS12285 0.14 -0.2 2,465,987 + A4249_RS12285 0.14 -0.2 2,465,987 + A4249_RS12285 0.14 -0.3 2,465,987 + A4249_RS12285 0.14 -0.1 2,466,086 + A4249_RS12285 0.21 -0.0 2,466,086 + A4249_RS12285 0.21 +0.0 2,466,086 + A4249_RS12285 0.21 -0.1 2,466,086 + A4249_RS12285 0.21 -0.0 2,466,086 + A4249_RS12285 0.21 +0.3 2,466,086 + A4249_RS12285 0.21 -0.3 2,466,086 + A4249_RS12285 0.21 -0.0 2,466,086 + A4249_RS12285 0.21 -0.3 2,466,086 + A4249_RS12285 0.21 +0.1 2,466,087 - A4249_RS12285 0.21 +0.1 2,466,087 - A4249_RS12285 0.21 -0.3 2,466,152 + A4249_RS12285 0.25 +0.1 2,466,152 + A4249_RS12285 0.25 -0.0 2,466,152 + A4249_RS12285 0.25 -0.1 2,466,152 + A4249_RS12285 0.25 -0.0 2,466,152 + A4249_RS12285 0.25 -0.1 2,466,153 - A4249_RS12285 0.25 +0.1 2,466,153 - A4249_RS12285 0.25 -0.2 2,466,153 - A4249_RS12285 0.25 +0.3 2,466,179 + A4249_RS12285 0.27 -0.0 2,466,179 + A4249_RS12285 0.27 -0.0 2,466,180 - A4249_RS12285 0.27 -0.0 2,466,180 - A4249_RS12285 0.27 -0.1 2,466,180 - A4249_RS12285 0.27 -0.1 2,466,195 - A4249_RS12285 0.28 +0.2 2,466,270 + A4249_RS12285 0.34 -0.6 2,466,270 + A4249_RS12285 0.34 -0.0 2,466,278 + A4249_RS12285 0.34 +0.0 2,466,278 + A4249_RS12285 0.34 -0.2 2,466,278 + A4249_RS12285 0.34 +0.1 2,466,278 + A4249_RS12285 0.34 -0.1 2,466,279 - A4249_RS12285 0.34 -0.2 2,466,279 - A4249_RS12285 0.34 +0.1 2,466,279 - A4249_RS12285 0.34 -0.3 2,466,279 - A4249_RS12285 0.34 -0.1 2,466,368 + A4249_RS12285 0.41 -0.1 2,466,368 + A4249_RS12285 0.41 +0.0 2,466,402 - A4249_RS12285 0.43 -0.1 2,466,402 - A4249_RS12285 0.43 +0.0 2,466,402 - A4249_RS12285 0.43 -0.1 2,466,402 - A4249_RS12285 0.43 -0.2 2,466,402 - A4249_RS12285 0.43 +0.0 2,466,464 + A4249_RS12285 0.47 -0.2 2,466,464 + A4249_RS12285 0.47 -0.3 2,466,464 + A4249_RS12285 0.47 -0.8 2,466,464 + A4249_RS12285 0.47 +0.0 2,466,464 + A4249_RS12285 0.47 -0.2 2,466,464 + A4249_RS12285 0.47 -0.4 2,466,464 + A4249_RS12285 0.47 +0.0 2,466,465 - A4249_RS12285 0.47 -0.1 2,466,465 - A4249_RS12285 0.47 -0.1 2,466,465 - A4249_RS12285 0.47 -0.2 2,466,465 - A4249_RS12285 0.47 +0.1 2,466,465 - A4249_RS12285 0.47 -0.2 2,466,465 - A4249_RS12285 0.47 -0.3 2,466,465 - A4249_RS12285 0.47 -0.3 2,466,465 - A4249_RS12285 0.47 -0.1 2,466,465 - A4249_RS12285 0.47 -0.2 2,466,611 + A4249_RS12285 0.58 -0.3 2,466,611 + A4249_RS12285 0.58 -0.0 2,466,611 + A4249_RS12285 0.58 +0.0 2,466,611 + A4249_RS12285 0.58 +0.1 2,466,611 + A4249_RS12285 0.58 +0.1 2,466,611 + A4249_RS12285 0.58 -0.0 2,466,612 - A4249_RS12285 0.58 -0.0 2,466,612 - A4249_RS12285 0.58 -0.1 2,466,612 - A4249_RS12285 0.58 -0.1 2,466,612 - A4249_RS12285 0.58 +0.0 2,466,612 - A4249_RS12285 0.58 -0.2 2,466,612 - A4249_RS12285 0.58 -0.1 2,466,612 - A4249_RS12285 0.58 -0.2 2,466,612 - A4249_RS12285 0.58 -1.9 2,466,612 - A4249_RS12285 0.58 -0.2 2,466,735 + A4249_RS12285 0.67 +0.2 2,466,735 + A4249_RS12285 0.67 +0.1 2,466,735 + A4249_RS12285 0.67 -0.1 2,466,735 + A4249_RS12285 0.67 -0.0 2,466,735 + A4249_RS12285 0.67 +0.1 2,466,735 + A4249_RS12285 0.67 -0.0 2,466,735 + A4249_RS12285 0.67 +0.1 2,466,735 + A4249_RS12285 0.67 -0.1 2,466,736 - A4249_RS12285 0.67 -0.0 2,466,736 - A4249_RS12285 0.67 -0.2 2,466,736 - A4249_RS12285 0.67 +0.0 2,466,736 - A4249_RS12285 0.67 +0.1 2,466,736 - A4249_RS12285 0.67 +0.1 2,466,736 - A4249_RS12285 0.67 -0.2 2,466,736 - A4249_RS12285 0.67 -0.4
Or see this region's nucleotide sequence