Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11955 and A4249_RS11960 are separated by 162 nucleotides A4249_RS11960 and A4249_RS11965 overlap by 4 nucleotides A4249_RS11965 and A4249_RS11970 are separated by 42 nucleotides
A4249_RS11955: A4249_RS11955 - 2'-deoxycytidine 5'-triphosphate deaminase, at 2,400,738 to 2,401,763
_RS11955
A4249_RS11960: A4249_RS11960 - MFS transporter, at 2,401,926 to 2,403,230
_RS11960
A4249_RS11965: A4249_RS11965 - cupin domain-containing protein, at 2,403,227 to 2,403,703
_RS11965
A4249_RS11970: A4249_RS11970 - succinyl-diaminopimelate desuccinylase, at 2,403,746 to 2,404,933
_RS11970
Position (kb)
2401
2402
2403
2404 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2401.837 kb on + strand at 2401.848 kb on + strand at 2401.849 kb on - strand at 2401.849 kb on - strand at 2401.865 kb on + strand at 2401.865 kb on + strand at 2401.865 kb on + strand at 2401.865 kb on + strand at 2401.865 kb on + strand at 2401.866 kb on - strand at 2401.866 kb on - strand at 2401.866 kb on - strand at 2401.866 kb on - strand at 2401.866 kb on - strand at 2402.323 kb on + strand, within A4249_RS11960 at 2402.323 kb on + strand, within A4249_RS11960 at 2402.323 kb on + strand, within A4249_RS11960 at 2402.323 kb on + strand, within A4249_RS11960 at 2402.323 kb on + strand, within A4249_RS11960 at 2402.323 kb on + strand, within A4249_RS11960 at 2402.323 kb on + strand, within A4249_RS11960 at 2402.324 kb on - strand, within A4249_RS11960 at 2402.324 kb on - strand, within A4249_RS11960 at 2402.324 kb on - strand, within A4249_RS11960 at 2402.324 kb on - strand, within A4249_RS11960 at 2402.324 kb on - strand, within A4249_RS11960 at 2402.324 kb on - strand, within A4249_RS11960 at 2402.324 kb on - strand, within A4249_RS11960 at 2402.324 kb on - strand, within A4249_RS11960 at 2402.324 kb on - strand, within A4249_RS11960 at 2402.324 kb on - strand, within A4249_RS11960 at 2402.500 kb on + strand, within A4249_RS11960 at 2402.500 kb on + strand, within A4249_RS11960 at 2402.500 kb on + strand, within A4249_RS11960 at 2402.500 kb on + strand, within A4249_RS11960 at 2402.500 kb on + strand, within A4249_RS11960 at 2402.500 kb on + strand, within A4249_RS11960 at 2402.500 kb on + strand, within A4249_RS11960 at 2402.500 kb on + strand, within A4249_RS11960 at 2402.500 kb on + strand, within A4249_RS11960 at 2402.500 kb on + strand, within A4249_RS11960 at 2402.500 kb on + strand, within A4249_RS11960 at 2402.501 kb on - strand, within A4249_RS11960 at 2402.501 kb on - strand, within A4249_RS11960 at 2402.501 kb on - strand, within A4249_RS11960 at 2402.501 kb on - strand, within A4249_RS11960 at 2402.501 kb on - strand, within A4249_RS11960 at 2402.501 kb on - strand, within A4249_RS11960 at 2402.626 kb on + strand, within A4249_RS11960 at 2402.627 kb on - strand, within A4249_RS11960 at 2402.916 kb on + strand, within A4249_RS11960 at 2403.001 kb on + strand, within A4249_RS11960 at 2403.001 kb on + strand, within A4249_RS11960 at 2403.001 kb on + strand, within A4249_RS11960 at 2403.001 kb on + strand, within A4249_RS11960 at 2403.002 kb on - strand, within A4249_RS11960 at 2403.002 kb on - strand, within A4249_RS11960 at 2403.002 kb on - strand, within A4249_RS11960 at 2403.002 kb on - strand, within A4249_RS11960 at 2403.046 kb on + strand, within A4249_RS11960 at 2403.046 kb on + strand, within A4249_RS11960 at 2403.046 kb on + strand, within A4249_RS11960 at 2403.047 kb on - strand, within A4249_RS11960 at 2403.047 kb on - strand, within A4249_RS11960 at 2403.047 kb on - strand, within A4249_RS11960 at 2403.047 kb on - strand, within A4249_RS11960 at 2403.047 kb on - strand, within A4249_RS11960 at 2403.047 kb on - strand, within A4249_RS11960 at 2403.047 kb on - strand, within A4249_RS11960 at 2403.047 kb on - strand, within A4249_RS11960 at 2403.047 kb on - strand, within A4249_RS11960 at 2403.243 kb on + strand at 2403.243 kb on + strand at 2403.243 kb on + strand at 2403.244 kb on - strand at 2403.244 kb on - strand at 2403.244 kb on - strand at 2403.276 kb on + strand, within A4249_RS11965 at 2403.397 kb on + strand, within A4249_RS11965 at 2403.397 kb on + strand, within A4249_RS11965 at 2403.397 kb on + strand, within A4249_RS11965 at 2403.398 kb on - strand, within A4249_RS11965 at 2403.654 kb on + strand, within A4249_RS11965 at 2403.654 kb on + strand, within A4249_RS11965 at 2403.655 kb on - strand, within A4249_RS11965 at 2403.655 kb on - strand, within A4249_RS11965 at 2403.655 kb on - strand, within A4249_RS11965 at 2403.655 kb on - strand, within A4249_RS11965 at 2403.655 kb on - strand, within A4249_RS11965 at 2403.655 kb on - strand, within A4249_RS11965 at 2403.739 kb on + strand at 2403.740 kb on - strand at 2403.740 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,401,837 + +1.1 2,401,848 + -1.1 2,401,849 - -1.6 2,401,849 - -0.0 2,401,865 + +0.0 2,401,865 + -0.2 2,401,865 + +0.4 2,401,865 + +0.3 2,401,865 + -0.5 2,401,866 - +0.1 2,401,866 - -0.3 2,401,866 - +0.6 2,401,866 - -0.1 2,401,866 - +1.0 2,402,323 + A4249_RS11960 0.30 -0.2 2,402,323 + A4249_RS11960 0.30 +0.1 2,402,323 + A4249_RS11960 0.30 +0.2 2,402,323 + A4249_RS11960 0.30 +0.1 2,402,323 + A4249_RS11960 0.30 +0.8 2,402,323 + A4249_RS11960 0.30 -0.2 2,402,323 + A4249_RS11960 0.30 +0.0 2,402,324 - A4249_RS11960 0.30 -0.2 2,402,324 - A4249_RS11960 0.30 -0.0 2,402,324 - A4249_RS11960 0.30 +0.6 2,402,324 - A4249_RS11960 0.30 +0.3 2,402,324 - A4249_RS11960 0.30 -0.0 2,402,324 - A4249_RS11960 0.30 -1.1 2,402,324 - A4249_RS11960 0.30 +0.4 2,402,324 - A4249_RS11960 0.30 +0.2 2,402,324 - A4249_RS11960 0.30 +0.9 2,402,324 - A4249_RS11960 0.30 -0.1 2,402,500 + A4249_RS11960 0.44 -0.5 2,402,500 + A4249_RS11960 0.44 -0.4 2,402,500 + A4249_RS11960 0.44 -0.9 2,402,500 + A4249_RS11960 0.44 -0.4 2,402,500 + A4249_RS11960 0.44 +0.7 2,402,500 + A4249_RS11960 0.44 +1.8 2,402,500 + A4249_RS11960 0.44 -0.1 2,402,500 + A4249_RS11960 0.44 +0.3 2,402,500 + A4249_RS11960 0.44 +0.4 2,402,500 + A4249_RS11960 0.44 +0.0 2,402,500 + A4249_RS11960 0.44 -1.3 2,402,501 - A4249_RS11960 0.44 -0.0 2,402,501 - A4249_RS11960 0.44 -1.0 2,402,501 - A4249_RS11960 0.44 +0.2 2,402,501 - A4249_RS11960 0.44 -0.6 2,402,501 - A4249_RS11960 0.44 +0.4 2,402,501 - A4249_RS11960 0.44 +0.4 2,402,626 + A4249_RS11960 0.54 -0.8 2,402,627 - A4249_RS11960 0.54 -0.3 2,402,916 + A4249_RS11960 0.76 -0.4 2,403,001 + A4249_RS11960 0.82 +0.6 2,403,001 + A4249_RS11960 0.82 -1.0 2,403,001 + A4249_RS11960 0.82 -0.2 2,403,001 + A4249_RS11960 0.82 -1.0 2,403,002 - A4249_RS11960 0.82 +0.3 2,403,002 - A4249_RS11960 0.82 -0.1 2,403,002 - A4249_RS11960 0.82 +0.1 2,403,002 - A4249_RS11960 0.82 +0.1 2,403,046 + A4249_RS11960 0.86 +0.5 2,403,046 + A4249_RS11960 0.86 +0.1 2,403,046 + A4249_RS11960 0.86 -1.0 2,403,047 - A4249_RS11960 0.86 +0.2 2,403,047 - A4249_RS11960 0.86 +0.6 2,403,047 - A4249_RS11960 0.86 +0.4 2,403,047 - A4249_RS11960 0.86 +0.7 2,403,047 - A4249_RS11960 0.86 +0.4 2,403,047 - A4249_RS11960 0.86 +0.0 2,403,047 - A4249_RS11960 0.86 +0.1 2,403,047 - A4249_RS11960 0.86 -0.0 2,403,047 - A4249_RS11960 0.86 +0.3 2,403,243 + +0.3 2,403,243 + +0.3 2,403,243 + -0.1 2,403,244 - +0.1 2,403,244 - -0.5 2,403,244 - -0.3 2,403,276 + A4249_RS11965 0.10 -0.3 2,403,397 + A4249_RS11965 0.36 +0.7 2,403,397 + A4249_RS11965 0.36 +0.3 2,403,397 + A4249_RS11965 0.36 -0.0 2,403,398 - A4249_RS11965 0.36 +0.8 2,403,654 + A4249_RS11965 0.90 -0.0 2,403,654 + A4249_RS11965 0.90 +0.3 2,403,655 - A4249_RS11965 0.90 -1.0 2,403,655 - A4249_RS11965 0.90 +0.1 2,403,655 - A4249_RS11965 0.90 -2.0 2,403,655 - A4249_RS11965 0.90 +0.1 2,403,655 - A4249_RS11965 0.90 +1.4 2,403,655 - A4249_RS11965 0.90 +0.2 2,403,739 + -0.5 2,403,740 - +0.1 2,403,740 - -1.8
Or see this region's nucleotide sequence