Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11950

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11945 and A4249_RS11950 are separated by 215 nucleotidesA4249_RS11950 and A4249_RS11955 are separated by 81 nucleotides A4249_RS11945: A4249_RS11945 - GcrA family cell cycle regulator, at 2,399,497 to 2,400,033 _RS11945 A4249_RS11950: A4249_RS11950 - Co2+/Mg2+ efflux protein ApaG, at 2,400,249 to 2,400,656 _RS11950 A4249_RS11955: A4249_RS11955 - 2'-deoxycytidine 5'-triphosphate deaminase, at 2,400,738 to 2,401,763 _RS11955 Position (kb) 2400 2401Strain fitness (log2 ratio) -2 -1 0 1 2at 2399.363 kb on + strandat 2399.408 kb on + strandat 2399.426 kb on + strandat 2399.426 kb on + strandat 2399.427 kb on - strandat 2399.432 kb on + strandat 2399.433 kb on - strandat 2399.464 kb on + strandat 2399.464 kb on + strandat 2399.465 kb on - strandat 2399.468 kb on + strandat 2399.468 kb on + strandat 2399.468 kb on + strandat 2399.526 kb on - strandat 2399.932 kb on + strand, within A4249_RS11945at 2399.932 kb on + strand, within A4249_RS11945at 2399.932 kb on + strand, within A4249_RS11945at 2400.026 kb on - strandat 2400.031 kb on + strandat 2400.031 kb on + strandat 2400.124 kb on + strandat 2400.124 kb on + strandat 2400.124 kb on + strandat 2400.124 kb on + strandat 2400.125 kb on - strandat 2400.125 kb on - strandat 2400.279 kb on - strandat 2400.279 kb on - strandat 2400.279 kb on - strandat 2400.279 kb on - strandat 2400.335 kb on + strand, within A4249_RS11950at 2400.335 kb on + strand, within A4249_RS11950at 2400.335 kb on + strand, within A4249_RS11950at 2400.335 kb on + strand, within A4249_RS11950at 2400.335 kb on + strand, within A4249_RS11950at 2400.335 kb on + strand, within A4249_RS11950at 2400.335 kb on + strand, within A4249_RS11950at 2400.335 kb on + strand, within A4249_RS11950at 2400.335 kb on + strand, within A4249_RS11950at 2400.336 kb on - strand, within A4249_RS11950at 2400.336 kb on - strand, within A4249_RS11950at 2400.336 kb on - strand, within A4249_RS11950at 2400.336 kb on - strand, within A4249_RS11950at 2400.336 kb on - strand, within A4249_RS11950at 2400.337 kb on + strand, within A4249_RS11950at 2400.337 kb on + strand, within A4249_RS11950at 2400.337 kb on + strand, within A4249_RS11950at 2400.337 kb on + strand, within A4249_RS11950at 2400.337 kb on + strand, within A4249_RS11950at 2400.337 kb on + strand, within A4249_RS11950at 2400.337 kb on + strand, within A4249_RS11950at 2400.338 kb on - strand, within A4249_RS11950at 2400.338 kb on - strand, within A4249_RS11950at 2400.338 kb on - strand, within A4249_RS11950at 2400.338 kb on - strand, within A4249_RS11950at 2400.338 kb on - strand, within A4249_RS11950at 2400.338 kb on - strand, within A4249_RS11950at 2400.338 kb on - strand, within A4249_RS11950at 2400.338 kb on - strand, within A4249_RS11950at 2400.338 kb on - strand, within A4249_RS11950at 2400.338 kb on - strand, within A4249_RS11950at 2400.338 kb on - strand, within A4249_RS11950at 2400.338 kb on - strand, within A4249_RS11950at 2400.338 kb on - strand, within A4249_RS11950at 2400.338 kb on - strand, within A4249_RS11950at 2400.338 kb on - strand, within A4249_RS11950at 2400.340 kb on + strand, within A4249_RS11950at 2400.340 kb on + strand, within A4249_RS11950at 2400.340 kb on + strand, within A4249_RS11950at 2400.341 kb on - strand, within A4249_RS11950at 2400.341 kb on - strand, within A4249_RS11950at 2400.341 kb on - strand, within A4249_RS11950at 2400.341 kb on - strand, within A4249_RS11950at 2400.341 kb on - strand, within A4249_RS11950at 2400.341 kb on - strand, within A4249_RS11950at 2400.341 kb on - strand, within A4249_RS11950at 2400.341 kb on - strand, within A4249_RS11950at 2400.397 kb on + strand, within A4249_RS11950at 2400.397 kb on + strand, within A4249_RS11950at 2400.397 kb on + strand, within A4249_RS11950at 2400.397 kb on + strand, within A4249_RS11950at 2400.398 kb on - strand, within A4249_RS11950at 2400.398 kb on - strand, within A4249_RS11950at 2400.398 kb on - strand, within A4249_RS11950at 2400.398 kb on - strand, within A4249_RS11950at 2400.414 kb on + strand, within A4249_RS11950at 2400.414 kb on + strand, within A4249_RS11950at 2400.414 kb on + strand, within A4249_RS11950at 2400.415 kb on - strand, within A4249_RS11950at 2400.501 kb on + strand, within A4249_RS11950at 2400.501 kb on + strand, within A4249_RS11950at 2400.501 kb on + strand, within A4249_RS11950at 2400.501 kb on + strand, within A4249_RS11950at 2400.501 kb on + strand, within A4249_RS11950at 2400.502 kb on - strand, within A4249_RS11950at 2400.502 kb on - strand, within A4249_RS11950at 2400.502 kb on - strand, within A4249_RS11950at 2400.544 kb on + strand, within A4249_RS11950at 2400.544 kb on + strand, within A4249_RS11950at 2400.544 kb on + strand, within A4249_RS11950at 2400.545 kb on - strand, within A4249_RS11950at 2400.545 kb on - strand, within A4249_RS11950at 2400.545 kb on - strand, within A4249_RS11950at 2400.592 kb on + strand, within A4249_RS11950at 2400.593 kb on - strand, within A4249_RS11950at 2400.636 kb on - strandat 2400.637 kb on + strandat 2400.638 kb on - strandat 2400.638 kb on - strandat 2400.638 kb on - strandat 2400.661 kb on + strandat 2400.661 kb on + strandat 2400.661 kb on + strandat 2400.661 kb on + strandat 2400.661 kb on + strandat 2400.661 kb on + strandat 2400.661 kb on + strandat 2400.662 kb on - strandat 2400.662 kb on - strandat 2400.662 kb on - strandat 2400.662 kb on - strandat 2400.662 kb on - strandat 2400.662 kb on - strandat 2400.662 kb on - strandat 2400.663 kb on + strandat 2400.663 kb on + strandat 2400.663 kb on + strandat 2400.663 kb on + strandat 2400.663 kb on + strandat 2400.664 kb on - strandat 2400.664 kb on - strandat 2400.664 kb on - strandat 2400.664 kb on - strandat 2400.664 kb on - strandat 2400.664 kb on - strandat 2400.664 kb on - strandat 2400.664 kb on - strandat 2400.664 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,399,363 + +0.6
2,399,408 + -0.5
2,399,426 + +0.4
2,399,426 + +0.2
2,399,427 - -0.2
2,399,432 + -1.0
2,399,433 - +0.4
2,399,464 + -0.3
2,399,464 + -0.4
2,399,465 - -0.2
2,399,468 + +0.0
2,399,468 + +0.8
2,399,468 + +0.8
2,399,526 - +0.0
2,399,932 + A4249_RS11945 0.81 -0.4
2,399,932 + A4249_RS11945 0.81 +0.2
2,399,932 + A4249_RS11945 0.81 +1.8
2,400,026 - +1.3
2,400,031 + +0.2
2,400,031 + +0.2
2,400,124 + -0.4
2,400,124 + -0.2
2,400,124 + +0.1
2,400,124 + -2.4
2,400,125 - +0.1
2,400,125 - -0.2
2,400,279 - +0.3
2,400,279 - -0.2
2,400,279 - +0.3
2,400,279 - -0.6
2,400,335 + A4249_RS11950 0.21 +0.5
2,400,335 + A4249_RS11950 0.21 +0.5
2,400,335 + A4249_RS11950 0.21 +0.0
2,400,335 + A4249_RS11950 0.21 -0.3
2,400,335 + A4249_RS11950 0.21 +0.2
2,400,335 + A4249_RS11950 0.21 -0.3
2,400,335 + A4249_RS11950 0.21 +0.5
2,400,335 + A4249_RS11950 0.21 +0.2
2,400,335 + A4249_RS11950 0.21 -0.6
2,400,336 - A4249_RS11950 0.21 +0.4
2,400,336 - A4249_RS11950 0.21 -0.4
2,400,336 - A4249_RS11950 0.21 -0.2
2,400,336 - A4249_RS11950 0.21 +0.1
2,400,336 - A4249_RS11950 0.21 +0.1
2,400,337 + A4249_RS11950 0.22 -0.4
2,400,337 + A4249_RS11950 0.22 +0.4
2,400,337 + A4249_RS11950 0.22 -0.2
2,400,337 + A4249_RS11950 0.22 +0.1
2,400,337 + A4249_RS11950 0.22 -0.3
2,400,337 + A4249_RS11950 0.22 +0.3
2,400,337 + A4249_RS11950 0.22 +0.1
2,400,338 - A4249_RS11950 0.22 -0.1
2,400,338 - A4249_RS11950 0.22 +1.4
2,400,338 - A4249_RS11950 0.22 +0.6
2,400,338 - A4249_RS11950 0.22 +0.1
2,400,338 - A4249_RS11950 0.22 +0.3
2,400,338 - A4249_RS11950 0.22 +0.3
2,400,338 - A4249_RS11950 0.22 -2.3
2,400,338 - A4249_RS11950 0.22 +0.0
2,400,338 - A4249_RS11950 0.22 -0.1
2,400,338 - A4249_RS11950 0.22 -0.1
2,400,338 - A4249_RS11950 0.22 -0.7
2,400,338 - A4249_RS11950 0.22 -0.2
2,400,338 - A4249_RS11950 0.22 -0.2
2,400,338 - A4249_RS11950 0.22 -0.7
2,400,338 - A4249_RS11950 0.22 +0.3
2,400,340 + A4249_RS11950 0.22 +0.7
2,400,340 + A4249_RS11950 0.22 -0.8
2,400,340 + A4249_RS11950 0.22 +0.4
2,400,341 - A4249_RS11950 0.23 +0.6
2,400,341 - A4249_RS11950 0.23 -0.8
2,400,341 - A4249_RS11950 0.23 -0.3
2,400,341 - A4249_RS11950 0.23 -0.3
2,400,341 - A4249_RS11950 0.23 -0.3
2,400,341 - A4249_RS11950 0.23 +0.0
2,400,341 - A4249_RS11950 0.23 -0.3
2,400,341 - A4249_RS11950 0.23 +0.3
2,400,397 + A4249_RS11950 0.36 -1.3
2,400,397 + A4249_RS11950 0.36 +0.5
2,400,397 + A4249_RS11950 0.36 +0.0
2,400,397 + A4249_RS11950 0.36 +0.3
2,400,398 - A4249_RS11950 0.37 -0.1
2,400,398 - A4249_RS11950 0.37 +0.0
2,400,398 - A4249_RS11950 0.37 -0.3
2,400,398 - A4249_RS11950 0.37 -0.5
2,400,414 + A4249_RS11950 0.40 +0.4
2,400,414 + A4249_RS11950 0.40 -0.5
2,400,414 + A4249_RS11950 0.40 +0.2
2,400,415 - A4249_RS11950 0.41 +0.0
2,400,501 + A4249_RS11950 0.62 +0.3
2,400,501 + A4249_RS11950 0.62 -1.3
2,400,501 + A4249_RS11950 0.62 +0.2
2,400,501 + A4249_RS11950 0.62 -0.3
2,400,501 + A4249_RS11950 0.62 -0.3
2,400,502 - A4249_RS11950 0.62 -0.8
2,400,502 - A4249_RS11950 0.62 -0.4
2,400,502 - A4249_RS11950 0.62 -0.8
2,400,544 + A4249_RS11950 0.72 +0.2
2,400,544 + A4249_RS11950 0.72 -0.6
2,400,544 + A4249_RS11950 0.72 -0.4
2,400,545 - A4249_RS11950 0.73 +0.0
2,400,545 - A4249_RS11950 0.73 +0.2
2,400,545 - A4249_RS11950 0.73 +0.5
2,400,592 + A4249_RS11950 0.84 +0.4
2,400,593 - A4249_RS11950 0.84 -0.0
2,400,636 - +0.3
2,400,637 + -0.1
2,400,638 - -0.2
2,400,638 - +0.2
2,400,638 - +0.2
2,400,661 + +0.2
2,400,661 + -0.0
2,400,661 + -0.6
2,400,661 + -0.5
2,400,661 + +0.1
2,400,661 + -0.1
2,400,661 + -0.0
2,400,662 - -1.2
2,400,662 - +0.1
2,400,662 - +1.1
2,400,662 - +0.6
2,400,662 - -0.5
2,400,662 - +0.3
2,400,662 - -0.9
2,400,663 + +0.2
2,400,663 + +0.8
2,400,663 + -0.3
2,400,663 + -0.8
2,400,663 + +2.0
2,400,664 - +1.2
2,400,664 - +0.2
2,400,664 - -0.1
2,400,664 - +0.2
2,400,664 - -0.5
2,400,664 - -0.6
2,400,664 - +0.1
2,400,664 - -0.0
2,400,664 - +0.1

Or see this region's nucleotide sequence