Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11520 and A4249_RS11525 are separated by 29 nucleotides A4249_RS11525 and A4249_RS11530 are separated by 99 nucleotides A4249_RS11530 and A4249_RS11535 are separated by 64 nucleotides A4249_RS11535 and A4249_RS11540 overlap by 1 nucleotides
A4249_RS11520: A4249_RS11520 - class I SAM-dependent methyltransferase, at 2,320,008 to 2,320,625
_RS11520
A4249_RS11525: A4249_RS11525 - DsrE family protein, at 2,320,655 to 2,321,179
_RS11525
A4249_RS11530: A4249_RS11530 - peroxiredoxin, at 2,321,279 to 2,321,929
_RS11530
A4249_RS11535: A4249_RS11535 - MBL fold metallo-hydrolase, at 2,321,994 to 2,322,893
_RS11535
A4249_RS11540: A4249_RS11540 - substrate-binding domain-containing protein, at 2,322,893 to 2,323,666
_RS11540
Position (kb)
2321
2322 Strain fitness (log2 ratio)
-2
-1
0
1 at 2320.385 kb on + strand, within A4249_RS11520 at 2320.385 kb on + strand, within A4249_RS11520 at 2320.385 kb on + strand, within A4249_RS11520 at 2320.385 kb on + strand, within A4249_RS11520 at 2320.385 kb on + strand, within A4249_RS11520 at 2320.385 kb on + strand, within A4249_RS11520 at 2320.386 kb on - strand, within A4249_RS11520 at 2320.386 kb on - strand, within A4249_RS11520 at 2320.386 kb on - strand, within A4249_RS11520 at 2320.386 kb on - strand, within A4249_RS11520 at 2320.386 kb on - strand, within A4249_RS11520 at 2320.452 kb on + strand, within A4249_RS11520 at 2320.488 kb on + strand, within A4249_RS11520 at 2320.488 kb on + strand, within A4249_RS11520 at 2320.489 kb on - strand, within A4249_RS11520 at 2320.489 kb on - strand, within A4249_RS11520 at 2320.790 kb on + strand, within A4249_RS11525 at 2320.790 kb on + strand, within A4249_RS11525 at 2320.791 kb on - strand, within A4249_RS11525 at 2320.873 kb on + strand, within A4249_RS11525 at 2320.873 kb on + strand, within A4249_RS11525 at 2320.873 kb on + strand, within A4249_RS11525 at 2320.873 kb on + strand, within A4249_RS11525 at 2320.873 kb on + strand, within A4249_RS11525 at 2320.874 kb on - strand, within A4249_RS11525 at 2320.874 kb on - strand, within A4249_RS11525 at 2320.874 kb on - strand, within A4249_RS11525 at 2321.160 kb on - strand at 2321.160 kb on - strand at 2321.240 kb on - strand at 2321.272 kb on + strand at 2321.273 kb on - strand at 2321.273 kb on - strand at 2321.360 kb on + strand, within A4249_RS11530 at 2321.493 kb on + strand, within A4249_RS11530 at 2321.514 kb on + strand, within A4249_RS11530 at 2321.514 kb on + strand, within A4249_RS11530 at 2321.514 kb on + strand, within A4249_RS11530 at 2321.514 kb on + strand, within A4249_RS11530 at 2321.515 kb on - strand, within A4249_RS11530 at 2321.603 kb on + strand, within A4249_RS11530 at 2321.603 kb on + strand, within A4249_RS11530 at 2321.693 kb on + strand, within A4249_RS11530 at 2321.693 kb on + strand, within A4249_RS11530 at 2321.693 kb on + strand, within A4249_RS11530 at 2321.693 kb on + strand, within A4249_RS11530 at 2321.693 kb on + strand, within A4249_RS11530 at 2321.693 kb on + strand, within A4249_RS11530 at 2321.693 kb on + strand, within A4249_RS11530 at 2321.694 kb on - strand, within A4249_RS11530 at 2321.694 kb on - strand, within A4249_RS11530 at 2321.694 kb on - strand, within A4249_RS11530 at 2321.694 kb on - strand, within A4249_RS11530 at 2321.694 kb on - strand, within A4249_RS11530 at 2321.694 kb on - strand, within A4249_RS11530 at 2321.694 kb on - strand, within A4249_RS11530 at 2321.695 kb on - strand, within A4249_RS11530 at 2321.696 kb on + strand, within A4249_RS11530 at 2321.696 kb on + strand, within A4249_RS11530 at 2321.696 kb on + strand, within A4249_RS11530 at 2321.696 kb on + strand, within A4249_RS11530 at 2321.697 kb on - strand, within A4249_RS11530 at 2321.697 kb on - strand, within A4249_RS11530 at 2321.697 kb on - strand, within A4249_RS11530 at 2321.867 kb on + strand at 2321.867 kb on + strand at 2321.868 kb on - strand at 2321.868 kb on - strand at 2321.868 kb on - strand at 2321.868 kb on - strand at 2321.868 kb on - strand at 2321.873 kb on + strand at 2321.873 kb on + strand at 2321.873 kb on + strand at 2321.885 kb on + strand at 2321.885 kb on + strand at 2321.886 kb on - strand at 2321.886 kb on - strand at 2322.063 kb on + strand at 2322.063 kb on + strand at 2322.063 kb on + strand at 2322.063 kb on + strand at 2322.063 kb on + strand at 2322.064 kb on - strand at 2322.064 kb on - strand at 2322.064 kb on - strand at 2322.064 kb on - strand at 2322.064 kb on - strand at 2322.064 kb on - strand at 2322.174 kb on + strand, within A4249_RS11535 at 2322.174 kb on + strand, within A4249_RS11535 at 2322.174 kb on + strand, within A4249_RS11535 at 2322.174 kb on + strand, within A4249_RS11535 at 2322.175 kb on - strand, within A4249_RS11535 at 2322.175 kb on - strand, within A4249_RS11535 at 2322.175 kb on - strand, within A4249_RS11535 at 2322.175 kb on - strand, within A4249_RS11535 at 2322.175 kb on - strand, within A4249_RS11535 at 2322.175 kb on - strand, within A4249_RS11535 at 2322.175 kb on - strand, within A4249_RS11535 at 2322.330 kb on + strand, within A4249_RS11535 at 2322.331 kb on - strand, within A4249_RS11535 at 2322.331 kb on - strand, within A4249_RS11535 at 2322.331 kb on - strand, within A4249_RS11535 at 2322.331 kb on - strand, within A4249_RS11535 at 2322.331 kb on - strand, within A4249_RS11535 at 2322.331 kb on - strand, within A4249_RS11535 at 2322.331 kb on - strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.466 kb on - strand, within A4249_RS11535 at 2322.466 kb on - strand, within A4249_RS11535 at 2322.466 kb on - strand, within A4249_RS11535 at 2322.466 kb on - strand, within A4249_RS11535 at 2322.513 kb on + strand, within A4249_RS11535 at 2322.513 kb on + strand, within A4249_RS11535 at 2322.514 kb on - strand, within A4249_RS11535 at 2322.627 kb on + strand, within A4249_RS11535 at 2322.628 kb on - strand, within A4249_RS11535 at 2322.628 kb on - strand, within A4249_RS11535 at 2322.628 kb on - strand, within A4249_RS11535 at 2322.780 kb on + strand, within A4249_RS11535 at 2322.780 kb on + strand, within A4249_RS11535 at 2322.780 kb on + strand, within A4249_RS11535 at 2322.780 kb on + strand, within A4249_RS11535 at 2322.781 kb on - strand, within A4249_RS11535 at 2322.843 kb on + strand at 2322.843 kb on + strand at 2322.843 kb on + strand at 2322.844 kb on - strand at 2322.844 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,320,385 + A4249_RS11520 0.61 -0.2 2,320,385 + A4249_RS11520 0.61 -0.3 2,320,385 + A4249_RS11520 0.61 +0.1 2,320,385 + A4249_RS11520 0.61 -1.4 2,320,385 + A4249_RS11520 0.61 +1.5 2,320,385 + A4249_RS11520 0.61 -0.4 2,320,386 - A4249_RS11520 0.61 -0.2 2,320,386 - A4249_RS11520 0.61 -0.7 2,320,386 - A4249_RS11520 0.61 -0.2 2,320,386 - A4249_RS11520 0.61 +0.1 2,320,386 - A4249_RS11520 0.61 -0.0 2,320,452 + A4249_RS11520 0.72 +0.6 2,320,488 + A4249_RS11520 0.78 -0.3 2,320,488 + A4249_RS11520 0.78 -0.0 2,320,489 - A4249_RS11520 0.78 -0.0 2,320,489 - A4249_RS11520 0.78 -0.4 2,320,790 + A4249_RS11525 0.26 -2.0 2,320,790 + A4249_RS11525 0.26 -0.5 2,320,791 - A4249_RS11525 0.26 -0.1 2,320,873 + A4249_RS11525 0.42 -0.7 2,320,873 + A4249_RS11525 0.42 -0.3 2,320,873 + A4249_RS11525 0.42 -0.2 2,320,873 + A4249_RS11525 0.42 -1.1 2,320,873 + A4249_RS11525 0.42 -0.5 2,320,874 - A4249_RS11525 0.42 +0.9 2,320,874 - A4249_RS11525 0.42 -0.4 2,320,874 - A4249_RS11525 0.42 +0.4 2,321,160 - -0.9 2,321,160 - -0.6 2,321,240 - +0.6 2,321,272 + -0.7 2,321,273 - -0.5 2,321,273 - -0.0 2,321,360 + A4249_RS11530 0.12 -0.2 2,321,493 + A4249_RS11530 0.33 +0.1 2,321,514 + A4249_RS11530 0.36 +0.2 2,321,514 + A4249_RS11530 0.36 +0.0 2,321,514 + A4249_RS11530 0.36 -1.1 2,321,514 + A4249_RS11530 0.36 +0.5 2,321,515 - A4249_RS11530 0.36 +0.1 2,321,603 + A4249_RS11530 0.50 -0.2 2,321,603 + A4249_RS11530 0.50 -0.3 2,321,693 + A4249_RS11530 0.64 -0.5 2,321,693 + A4249_RS11530 0.64 -0.1 2,321,693 + A4249_RS11530 0.64 +0.3 2,321,693 + A4249_RS11530 0.64 +0.2 2,321,693 + A4249_RS11530 0.64 -0.5 2,321,693 + A4249_RS11530 0.64 +0.0 2,321,693 + A4249_RS11530 0.64 -0.3 2,321,694 - A4249_RS11530 0.64 -0.8 2,321,694 - A4249_RS11530 0.64 -1.0 2,321,694 - A4249_RS11530 0.64 -0.2 2,321,694 - A4249_RS11530 0.64 +0.1 2,321,694 - A4249_RS11530 0.64 +0.2 2,321,694 - A4249_RS11530 0.64 +0.9 2,321,694 - A4249_RS11530 0.64 +0.6 2,321,695 - A4249_RS11530 0.64 -0.1 2,321,696 + A4249_RS11530 0.64 +1.2 2,321,696 + A4249_RS11530 0.64 -0.6 2,321,696 + A4249_RS11530 0.64 -0.2 2,321,696 + A4249_RS11530 0.64 -0.8 2,321,697 - A4249_RS11530 0.64 +0.2 2,321,697 - A4249_RS11530 0.64 +0.5 2,321,697 - A4249_RS11530 0.64 +0.3 2,321,867 + +0.6 2,321,867 + +0.3 2,321,868 - -0.1 2,321,868 - +0.4 2,321,868 - +1.2 2,321,868 - +0.1 2,321,868 - +0.0 2,321,873 + +0.3 2,321,873 + -0.0 2,321,873 + +0.2 2,321,885 + +0.4 2,321,885 + +0.0 2,321,886 - +0.8 2,321,886 - +0.2 2,322,063 + -1.8 2,322,063 + -0.6 2,322,063 + -0.0 2,322,063 + +0.8 2,322,063 + +0.7 2,322,064 - +0.3 2,322,064 - +0.4 2,322,064 - -0.1 2,322,064 - -0.0 2,322,064 - -0.6 2,322,064 - -0.0 2,322,174 + A4249_RS11535 0.20 -0.1 2,322,174 + A4249_RS11535 0.20 -0.5 2,322,174 + A4249_RS11535 0.20 +0.3 2,322,174 + A4249_RS11535 0.20 +0.4 2,322,175 - A4249_RS11535 0.20 -0.6 2,322,175 - A4249_RS11535 0.20 -0.6 2,322,175 - A4249_RS11535 0.20 +0.5 2,322,175 - A4249_RS11535 0.20 +1.1 2,322,175 - A4249_RS11535 0.20 -0.1 2,322,175 - A4249_RS11535 0.20 -0.4 2,322,175 - A4249_RS11535 0.20 +0.4 2,322,330 + A4249_RS11535 0.37 +0.4 2,322,331 - A4249_RS11535 0.37 -0.3 2,322,331 - A4249_RS11535 0.37 -0.2 2,322,331 - A4249_RS11535 0.37 +0.1 2,322,331 - A4249_RS11535 0.37 -0.2 2,322,331 - A4249_RS11535 0.37 -0.3 2,322,331 - A4249_RS11535 0.37 -0.9 2,322,331 - A4249_RS11535 0.37 -0.2 2,322,465 + A4249_RS11535 0.52 -1.2 2,322,465 + A4249_RS11535 0.52 -0.2 2,322,465 + A4249_RS11535 0.52 +0.1 2,322,465 + A4249_RS11535 0.52 -0.0 2,322,465 + A4249_RS11535 0.52 +0.1 2,322,465 + A4249_RS11535 0.52 +0.9 2,322,465 + A4249_RS11535 0.52 -0.7 2,322,465 + A4249_RS11535 0.52 -0.7 2,322,466 - A4249_RS11535 0.52 +0.1 2,322,466 - A4249_RS11535 0.52 -0.4 2,322,466 - A4249_RS11535 0.52 -0.7 2,322,466 - A4249_RS11535 0.52 -2.1 2,322,513 + A4249_RS11535 0.58 -0.5 2,322,513 + A4249_RS11535 0.58 -0.3 2,322,514 - A4249_RS11535 0.58 -0.1 2,322,627 + A4249_RS11535 0.70 -0.8 2,322,628 - A4249_RS11535 0.70 -1.3 2,322,628 - A4249_RS11535 0.70 -1.0 2,322,628 - A4249_RS11535 0.70 +0.3 2,322,780 + A4249_RS11535 0.87 -1.3 2,322,780 + A4249_RS11535 0.87 +0.1 2,322,780 + A4249_RS11535 0.87 -0.1 2,322,780 + A4249_RS11535 0.87 +1.0 2,322,781 - A4249_RS11535 0.87 -0.7 2,322,843 + -1.0 2,322,843 + -1.6 2,322,843 + -0.5 2,322,844 - -0.2 2,322,844 - +0.2
Or see this region's nucleotide sequence