Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11475 and A4249_RS11480 overlap by 4 nucleotides A4249_RS11480 and A4249_RS11485 are separated by 93 nucleotides A4249_RS11485 and A4249_RS11490 are separated by 398 nucleotides
A4249_RS11475: A4249_RS11475 - ligase-associated DNA damage response DEXH box helicase, at 2,309,012 to 2,311,426
_RS11475
A4249_RS11480: A4249_RS11480 - ligase-associated DNA damage response endonuclease PdeM, at 2,311,423 to 2,312,175
_RS11480
A4249_RS11485: A4249_RS11485 - hypothetical protein, at 2,312,269 to 2,312,730
_RS11485
A4249_RS11490: A4249_RS11490 - sensor histidine kinase N-terminal domain-containing protein, at 2,313,129 to 2,314,460
_RS11490
Position (kb)
2311
2312
2313 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2310.485 kb on + strand, within A4249_RS11475 at 2310.485 kb on + strand, within A4249_RS11475 at 2310.486 kb on - strand, within A4249_RS11475 at 2310.486 kb on - strand, within A4249_RS11475 at 2310.486 kb on - strand, within A4249_RS11475 at 2310.812 kb on + strand, within A4249_RS11475 at 2310.914 kb on + strand, within A4249_RS11475 at 2310.915 kb on - strand, within A4249_RS11475 at 2311.136 kb on + strand, within A4249_RS11475 at 2311.136 kb on + strand, within A4249_RS11475 at 2311.136 kb on + strand, within A4249_RS11475 at 2311.136 kb on + strand, within A4249_RS11475 at 2311.137 kb on - strand, within A4249_RS11475 at 2311.485 kb on - strand at 2311.508 kb on + strand, within A4249_RS11480 at 2311.508 kb on + strand, within A4249_RS11480 at 2311.509 kb on - strand, within A4249_RS11480 at 2311.509 kb on - strand, within A4249_RS11480 at 2311.509 kb on - strand, within A4249_RS11480 at 2311.509 kb on - strand, within A4249_RS11480 at 2311.509 kb on - strand, within A4249_RS11480 at 2311.509 kb on - strand, within A4249_RS11480 at 2311.509 kb on - strand, within A4249_RS11480 at 2311.509 kb on - strand, within A4249_RS11480 at 2311.622 kb on - strand, within A4249_RS11480 at 2311.622 kb on - strand, within A4249_RS11480 at 2311.622 kb on - strand, within A4249_RS11480 at 2311.622 kb on - strand, within A4249_RS11480 at 2311.872 kb on + strand, within A4249_RS11480 at 2311.985 kb on - strand, within A4249_RS11480 at 2312.070 kb on + strand, within A4249_RS11480 at 2312.173 kb on + strand at 2312.173 kb on + strand at 2312.173 kb on + strand at 2312.174 kb on - strand at 2312.174 kb on - strand at 2312.185 kb on - strand at 2312.185 kb on - strand at 2312.416 kb on + strand, within A4249_RS11485 at 2312.416 kb on + strand, within A4249_RS11485 at 2312.416 kb on + strand, within A4249_RS11485 at 2312.416 kb on + strand, within A4249_RS11485 at 2312.416 kb on + strand, within A4249_RS11485 at 2312.416 kb on + strand, within A4249_RS11485 at 2312.417 kb on - strand, within A4249_RS11485 at 2312.417 kb on - strand, within A4249_RS11485 at 2312.417 kb on - strand, within A4249_RS11485 at 2312.417 kb on - strand, within A4249_RS11485 at 2312.417 kb on - strand, within A4249_RS11485 at 2312.417 kb on - strand, within A4249_RS11485 at 2312.417 kb on - strand, within A4249_RS11485 at 2312.479 kb on + strand, within A4249_RS11485 at 2312.479 kb on + strand, within A4249_RS11485 at 2312.479 kb on + strand, within A4249_RS11485 at 2312.479 kb on + strand, within A4249_RS11485 at 2312.479 kb on + strand, within A4249_RS11485 at 2312.479 kb on + strand, within A4249_RS11485 at 2312.479 kb on + strand, within A4249_RS11485 at 2312.479 kb on + strand, within A4249_RS11485 at 2312.480 kb on - strand, within A4249_RS11485 at 2312.480 kb on - strand, within A4249_RS11485 at 2312.480 kb on - strand, within A4249_RS11485 at 2312.480 kb on - strand, within A4249_RS11485 at 2312.480 kb on - strand, within A4249_RS11485 at 2312.480 kb on - strand, within A4249_RS11485 at 2312.728 kb on + strand at 2312.742 kb on + strand at 2312.742 kb on + strand at 2312.742 kb on + strand at 2312.742 kb on + strand at 2312.742 kb on + strand at 2312.742 kb on + strand at 2312.742 kb on + strand at 2312.743 kb on - strand at 2312.743 kb on - strand at 2312.743 kb on - strand at 2312.743 kb on - strand at 2312.743 kb on - strand at 2312.743 kb on - strand at 2312.743 kb on - strand at 2312.743 kb on - strand at 2312.753 kb on - strand at 2312.847 kb on + strand at 2312.847 kb on + strand at 2312.847 kb on + strand at 2312.848 kb on - strand at 2312.848 kb on - strand at 2312.848 kb on - strand at 2312.911 kb on - strand at 2312.911 kb on - strand at 2312.977 kb on + strand at 2312.977 kb on + strand at 2312.977 kb on + strand at 2312.978 kb on - strand at 2312.978 kb on - strand at 2313.007 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.066 kb on + strand at 2313.067 kb on - strand at 2313.067 kb on - strand at 2313.067 kb on - strand at 2313.067 kb on - strand at 2313.067 kb on - strand at 2313.067 kb on - strand at 2313.130 kb on + strand at 2313.130 kb on + strand at 2313.130 kb on + strand at 2313.130 kb on + strand at 2313.131 kb on - strand at 2313.146 kb on + strand at 2313.146 kb on + strand at 2313.146 kb on + strand at 2313.147 kb on - strand at 2313.152 kb on + strand at 2313.152 kb on + strand at 2313.152 kb on + strand at 2313.152 kb on + strand at 2313.152 kb on + strand at 2313.152 kb on + strand at 2313.152 kb on + strand at 2313.152 kb on + strand at 2313.152 kb on + strand at 2313.152 kb on + strand at 2313.153 kb on - strand at 2313.153 kb on - strand at 2313.153 kb on - strand at 2313.153 kb on - strand at 2313.153 kb on - strand at 2313.153 kb on - strand at 2313.153 kb on - strand at 2313.153 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,310,485 + A4249_RS11475 0.61 -0.8 2,310,485 + A4249_RS11475 0.61 +0.1 2,310,486 - A4249_RS11475 0.61 -2.7 2,310,486 - A4249_RS11475 0.61 +0.0 2,310,486 - A4249_RS11475 0.61 +0.5 2,310,812 + A4249_RS11475 0.75 -0.0 2,310,914 + A4249_RS11475 0.79 +0.5 2,310,915 - A4249_RS11475 0.79 -0.1 2,311,136 + A4249_RS11475 0.88 +0.1 2,311,136 + A4249_RS11475 0.88 +0.3 2,311,136 + A4249_RS11475 0.88 -0.8 2,311,136 + A4249_RS11475 0.88 -2.6 2,311,137 - A4249_RS11475 0.88 +0.2 2,311,485 - +0.2 2,311,508 + A4249_RS11480 0.11 -0.6 2,311,508 + A4249_RS11480 0.11 -0.2 2,311,509 - A4249_RS11480 0.11 +0.4 2,311,509 - A4249_RS11480 0.11 +0.6 2,311,509 - A4249_RS11480 0.11 +0.2 2,311,509 - A4249_RS11480 0.11 +0.4 2,311,509 - A4249_RS11480 0.11 -0.5 2,311,509 - A4249_RS11480 0.11 +0.5 2,311,509 - A4249_RS11480 0.11 +0.2 2,311,509 - A4249_RS11480 0.11 +0.2 2,311,622 - A4249_RS11480 0.26 -0.9 2,311,622 - A4249_RS11480 0.26 -1.3 2,311,622 - A4249_RS11480 0.26 -0.1 2,311,622 - A4249_RS11480 0.26 -0.2 2,311,872 + A4249_RS11480 0.60 +0.0 2,311,985 - A4249_RS11480 0.75 +0.5 2,312,070 + A4249_RS11480 0.86 -0.6 2,312,173 + -0.5 2,312,173 + -0.1 2,312,173 + -0.2 2,312,174 - +0.9 2,312,174 - -0.1 2,312,185 - -0.3 2,312,185 - -0.8 2,312,416 + A4249_RS11485 0.32 +0.5 2,312,416 + A4249_RS11485 0.32 -0.8 2,312,416 + A4249_RS11485 0.32 +1.0 2,312,416 + A4249_RS11485 0.32 -0.3 2,312,416 + A4249_RS11485 0.32 +1.4 2,312,416 + A4249_RS11485 0.32 -1.2 2,312,417 - A4249_RS11485 0.32 -1.0 2,312,417 - A4249_RS11485 0.32 -0.8 2,312,417 - A4249_RS11485 0.32 +0.3 2,312,417 - A4249_RS11485 0.32 +0.2 2,312,417 - A4249_RS11485 0.32 -0.1 2,312,417 - A4249_RS11485 0.32 -0.2 2,312,417 - A4249_RS11485 0.32 -0.4 2,312,479 + A4249_RS11485 0.45 +0.5 2,312,479 + A4249_RS11485 0.45 -0.2 2,312,479 + A4249_RS11485 0.45 -0.4 2,312,479 + A4249_RS11485 0.45 -0.4 2,312,479 + A4249_RS11485 0.45 -0.0 2,312,479 + A4249_RS11485 0.45 +0.2 2,312,479 + A4249_RS11485 0.45 -0.4 2,312,479 + A4249_RS11485 0.45 +0.4 2,312,480 - A4249_RS11485 0.46 -0.6 2,312,480 - A4249_RS11485 0.46 -0.3 2,312,480 - A4249_RS11485 0.46 +1.1 2,312,480 - A4249_RS11485 0.46 -0.7 2,312,480 - A4249_RS11485 0.46 -0.8 2,312,480 - A4249_RS11485 0.46 -1.1 2,312,728 + -0.0 2,312,742 + +0.7 2,312,742 + -0.6 2,312,742 + -1.0 2,312,742 + +0.2 2,312,742 + +0.2 2,312,742 + +0.1 2,312,742 + +0.5 2,312,743 - +1.1 2,312,743 - +0.7 2,312,743 - +0.1 2,312,743 - +0.0 2,312,743 - +1.4 2,312,743 - -0.2 2,312,743 - -0.1 2,312,743 - -0.1 2,312,753 - -0.5 2,312,847 + -1.0 2,312,847 + +0.4 2,312,847 + -0.6 2,312,848 - -0.5 2,312,848 - +0.0 2,312,848 - +0.5 2,312,911 - +0.0 2,312,911 - -0.3 2,312,977 + -1.3 2,312,977 + -0.3 2,312,977 + -0.3 2,312,978 - +0.2 2,312,978 - +0.5 2,313,007 + -1.4 2,313,066 + +0.2 2,313,066 + +0.2 2,313,066 + -0.8 2,313,066 + +0.4 2,313,066 + +0.2 2,313,066 + -0.0 2,313,066 + +0.6 2,313,066 + -0.4 2,313,066 + -0.1 2,313,066 + -1.3 2,313,066 + -0.3 2,313,066 + +0.3 2,313,066 + -0.6 2,313,066 + -0.3 2,313,066 + -0.4 2,313,066 + -1.0 2,313,066 + +0.1 2,313,066 + +0.9 2,313,067 - -0.0 2,313,067 - -1.0 2,313,067 - -0.2 2,313,067 - +0.4 2,313,067 - -0.3 2,313,067 - +0.5 2,313,130 + -0.3 2,313,130 + -0.5 2,313,130 + +0.1 2,313,130 + +0.4 2,313,131 - +0.2 2,313,146 + +1.3 2,313,146 + +0.1 2,313,146 + -0.3 2,313,147 - +0.0 2,313,152 + -0.2 2,313,152 + +0.0 2,313,152 + +1.8 2,313,152 + +0.4 2,313,152 + +0.8 2,313,152 + -0.5 2,313,152 + +0.2 2,313,152 + -0.1 2,313,152 + +0.2 2,313,152 + -1.3 2,313,153 - -0.3 2,313,153 - -0.3 2,313,153 - +0.2 2,313,153 - +0.0 2,313,153 - -0.1 2,313,153 - +0.1 2,313,153 - +0.5 2,313,153 - +1.4
Or see this region's nucleotide sequence