Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11400 and A4249_RS11405 are separated by 167 nucleotides A4249_RS11405 and A4249_RS11410 are separated by 99 nucleotides A4249_RS11410 and A4249_RS11415 are separated by 160 nucleotides A4249_RS11415 and A4249_RS11420 overlap by 8 nucleotides
A4249_RS11400: A4249_RS11400 - GNAT family N-acetyltransferase, at 2,295,433 to 2,295,966
_RS11400
A4249_RS11405: A4249_RS11405 - 50S ribosomal protein L27, at 2,296,134 to 2,296,421
_RS11405
A4249_RS11410: A4249_RS11410 - 50S ribosomal protein L21, at 2,296,521 to 2,297,075
_RS11410
A4249_RS11415: A4249_RS11415 - phosphoribosyltransferase family protein, at 2,297,236 to 2,297,769
_RS11415
A4249_RS11420: A4249_RS11420 - zinc-ribbon domain-containing protein, at 2,297,762 to 2,298,700
_RS11420
Position (kb)
2296
2297
2298 Strain fitness (log2 ratio)
-1
0
1 at 2295.656 kb on + strand, within A4249_RS11400 at 2295.657 kb on - strand, within A4249_RS11400 at 2295.657 kb on - strand, within A4249_RS11400 at 2295.990 kb on + strand at 2295.990 kb on + strand at 2295.991 kb on - strand at 2295.991 kb on - strand at 2296.070 kb on + strand at 2296.070 kb on + strand at 2296.070 kb on + strand at 2296.071 kb on - strand at 2296.071 kb on - strand at 2296.135 kb on + strand at 2296.136 kb on - strand at 2296.136 kb on - strand at 2296.136 kb on - strand at 2296.523 kb on - strand at 2297.294 kb on + strand, within A4249_RS11415 at 2297.513 kb on + strand, within A4249_RS11415 at 2297.513 kb on + strand, within A4249_RS11415 at 2297.513 kb on + strand, within A4249_RS11415 at 2297.513 kb on + strand, within A4249_RS11415 at 2297.513 kb on + strand, within A4249_RS11415 at 2297.513 kb on + strand, within A4249_RS11415 at 2297.514 kb on - strand, within A4249_RS11415 at 2297.514 kb on - strand, within A4249_RS11415 at 2297.514 kb on - strand, within A4249_RS11415 at 2297.514 kb on - strand, within A4249_RS11415 at 2297.514 kb on - strand, within A4249_RS11415 at 2297.514 kb on - strand, within A4249_RS11415 at 2297.514 kb on - strand, within A4249_RS11415 at 2297.514 kb on - strand, within A4249_RS11415 at 2297.552 kb on + strand, within A4249_RS11415 at 2297.552 kb on + strand, within A4249_RS11415 at 2297.552 kb on + strand, within A4249_RS11415 at 2297.552 kb on + strand, within A4249_RS11415 at 2297.553 kb on - strand, within A4249_RS11415
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,295,656 + A4249_RS11400 0.42 +0.3 2,295,657 - A4249_RS11400 0.42 -0.0 2,295,657 - A4249_RS11400 0.42 -0.1 2,295,990 + +0.3 2,295,990 + -0.1 2,295,991 - +0.1 2,295,991 - -0.1 2,296,070 + -0.4 2,296,070 + -0.0 2,296,070 + +0.5 2,296,071 - -0.7 2,296,071 - +0.5 2,296,135 + +0.3 2,296,136 - +0.1 2,296,136 - -0.1 2,296,136 - +0.2 2,296,523 - -0.3 2,297,294 + A4249_RS11415 0.11 +0.2 2,297,513 + A4249_RS11415 0.52 -0.7 2,297,513 + A4249_RS11415 0.52 +0.0 2,297,513 + A4249_RS11415 0.52 -0.5 2,297,513 + A4249_RS11415 0.52 -0.2 2,297,513 + A4249_RS11415 0.52 +0.3 2,297,513 + A4249_RS11415 0.52 +0.5 2,297,514 - A4249_RS11415 0.52 +1.7 2,297,514 - A4249_RS11415 0.52 -0.0 2,297,514 - A4249_RS11415 0.52 -1.0 2,297,514 - A4249_RS11415 0.52 -0.0 2,297,514 - A4249_RS11415 0.52 -1.0 2,297,514 - A4249_RS11415 0.52 +0.2 2,297,514 - A4249_RS11415 0.52 -0.9 2,297,514 - A4249_RS11415 0.52 -0.1 2,297,552 + A4249_RS11415 0.59 +0.5 2,297,552 + A4249_RS11415 0.59 -0.4 2,297,552 + A4249_RS11415 0.59 -0.6 2,297,552 + A4249_RS11415 0.59 -0.1 2,297,553 - A4249_RS11415 0.59 -0.1
Or see this region's nucleotide sequence