Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11375

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11365 and A4249_RS11370 are separated by 61 nucleotidesA4249_RS11370 and A4249_RS11375 are separated by 231 nucleotidesA4249_RS11375 and A4249_RS11380 are separated by 44 nucleotidesA4249_RS11380 and A4249_RS11385 overlap by 20 nucleotides A4249_RS11365: A4249_RS11365 - cation diffusion facilitator family transporter, at 2,289,595 to 2,290,581 _RS11365 A4249_RS11370: A4249_RS11370 - glutathione S-transferase family protein, at 2,290,643 to 2,291,329 _RS11370 A4249_RS11375: A4249_RS11375 - tRNA epoxyqueuosine(34) reductase QueG, at 2,291,561 to 2,292,670 _RS11375 A4249_RS11380: A4249_RS11380 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 2,292,715 to 2,293,230 _RS11380 A4249_RS11385: A4249_RS11385 - threonine ammonia-lyase, at 2,293,211 to 2,294,413 _RS11385 Position (kb) 2291 2292 2293Strain fitness (log2 ratio) -2 -1 0 1 2at 2290.605 kb on + strandat 2290.605 kb on + strandat 2290.640 kb on + strandat 2290.640 kb on + strandat 2290.640 kb on + strandat 2291.420 kb on + strandat 2291.420 kb on + strandat 2291.420 kb on + strandat 2291.420 kb on + strandat 2291.420 kb on + strandat 2291.420 kb on + strandat 2291.420 kb on + strandat 2291.420 kb on + strandat 2291.420 kb on + strandat 2291.420 kb on + strandat 2291.421 kb on - strandat 2291.421 kb on - strandat 2291.421 kb on - strandat 2291.421 kb on - strandat 2291.437 kb on + strandat 2291.437 kb on + strandat 2291.437 kb on + strandat 2291.437 kb on + strandat 2291.437 kb on + strandat 2291.438 kb on - strandat 2291.438 kb on - strandat 2291.438 kb on - strandat 2291.438 kb on - strandat 2291.438 kb on - strandat 2291.438 kb on - strandat 2291.438 kb on - strandat 2291.438 kb on - strandat 2291.541 kb on + strandat 2291.541 kb on + strandat 2291.541 kb on + strandat 2291.541 kb on + strandat 2291.541 kb on + strandat 2291.542 kb on - strandat 2291.542 kb on - strandat 2291.542 kb on - strandat 2291.542 kb on - strandat 2291.542 kb on - strandat 2291.548 kb on + strandat 2291.548 kb on + strandat 2291.792 kb on + strand, within A4249_RS11375at 2291.792 kb on + strand, within A4249_RS11375at 2291.792 kb on + strand, within A4249_RS11375at 2291.792 kb on + strand, within A4249_RS11375at 2291.792 kb on + strand, within A4249_RS11375at 2291.793 kb on - strand, within A4249_RS11375at 2291.793 kb on - strand, within A4249_RS11375at 2291.793 kb on - strand, within A4249_RS11375at 2291.793 kb on - strand, within A4249_RS11375at 2291.793 kb on - strand, within A4249_RS11375at 2291.843 kb on + strand, within A4249_RS11375at 2291.843 kb on + strand, within A4249_RS11375at 2291.844 kb on - strand, within A4249_RS11375at 2291.844 kb on - strand, within A4249_RS11375at 2291.844 kb on - strand, within A4249_RS11375at 2291.844 kb on - strand, within A4249_RS11375at 2291.855 kb on + strand, within A4249_RS11375at 2291.855 kb on + strand, within A4249_RS11375at 2291.855 kb on + strand, within A4249_RS11375at 2291.855 kb on + strand, within A4249_RS11375at 2291.856 kb on - strand, within A4249_RS11375at 2291.856 kb on - strand, within A4249_RS11375at 2291.856 kb on - strand, within A4249_RS11375at 2291.856 kb on - strand, within A4249_RS11375at 2291.873 kb on + strand, within A4249_RS11375at 2291.874 kb on - strand, within A4249_RS11375at 2291.874 kb on - strand, within A4249_RS11375at 2291.874 kb on - strand, within A4249_RS11375at 2291.874 kb on - strand, within A4249_RS11375at 2292.141 kb on + strand, within A4249_RS11375at 2292.206 kb on + strand, within A4249_RS11375at 2292.207 kb on - strand, within A4249_RS11375at 2292.207 kb on - strand, within A4249_RS11375at 2292.207 kb on - strand, within A4249_RS11375at 2292.272 kb on + strand, within A4249_RS11375at 2292.272 kb on + strand, within A4249_RS11375at 2292.272 kb on + strand, within A4249_RS11375at 2292.272 kb on + strand, within A4249_RS11375at 2292.272 kb on + strand, within A4249_RS11375at 2292.272 kb on + strand, within A4249_RS11375at 2292.272 kb on + strand, within A4249_RS11375at 2292.272 kb on + strand, within A4249_RS11375at 2292.273 kb on - strand, within A4249_RS11375at 2292.273 kb on - strand, within A4249_RS11375at 2292.273 kb on - strand, within A4249_RS11375at 2292.273 kb on - strand, within A4249_RS11375at 2292.273 kb on - strand, within A4249_RS11375at 2292.476 kb on + strand, within A4249_RS11375at 2292.476 kb on + strand, within A4249_RS11375at 2292.477 kb on - strand, within A4249_RS11375at 2292.477 kb on - strand, within A4249_RS11375at 2292.477 kb on - strand, within A4249_RS11375at 2292.640 kb on + strandat 2292.641 kb on - strandat 2292.641 kb on - strandat 2292.641 kb on - strandat 2292.641 kb on - strandat 2292.641 kb on - strandat 2292.648 kb on + strandat 2292.649 kb on - strandat 2292.649 kb on - strandat 2292.675 kb on + strandat 2292.675 kb on + strandat 2292.676 kb on - strandat 2292.819 kb on + strand, within A4249_RS11380at 2292.819 kb on + strand, within A4249_RS11380at 2292.820 kb on - strand, within A4249_RS11380at 2292.834 kb on - strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.968 kb on - strand, within A4249_RS11380at 2292.995 kb on + strand, within A4249_RS11380at 2292.995 kb on + strand, within A4249_RS11380at 2292.996 kb on - strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.435 kb on - strand, within A4249_RS11385at 2293.435 kb on - strand, within A4249_RS11385at 2293.554 kb on + strand, within A4249_RS11385at 2293.611 kb on + strand, within A4249_RS11385at 2293.611 kb on + strand, within A4249_RS11385at 2293.612 kb on - strand, within A4249_RS11385at 2293.612 kb on - strand, within A4249_RS11385at 2293.612 kb on - strand, within A4249_RS11385at 2293.612 kb on - strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,290,605 + -0.6
2,290,605 + +1.2
2,290,640 + +0.9
2,290,640 + +0.1
2,290,640 + +0.0
2,291,420 + -0.6
2,291,420 + -0.1
2,291,420 + -0.2
2,291,420 + +0.1
2,291,420 + -0.4
2,291,420 + -0.1
2,291,420 + -0.2
2,291,420 + -1.4
2,291,420 + -0.1
2,291,420 + -0.8
2,291,421 - +0.9
2,291,421 - +0.8
2,291,421 - +0.2
2,291,421 - +0.0
2,291,437 + +0.3
2,291,437 + -0.8
2,291,437 + -1.5
2,291,437 + +0.2
2,291,437 + +0.2
2,291,438 - +0.1
2,291,438 - -0.9
2,291,438 - +0.1
2,291,438 - -0.6
2,291,438 - +0.3
2,291,438 - +0.3
2,291,438 - -0.3
2,291,438 - -0.8
2,291,541 + -1.5
2,291,541 + -1.2
2,291,541 + -0.8
2,291,541 + +0.1
2,291,541 + -0.8
2,291,542 - +0.3
2,291,542 - -0.3
2,291,542 - -1.8
2,291,542 - -0.2
2,291,542 - -0.2
2,291,548 + -0.2
2,291,548 + -0.2
2,291,792 + A4249_RS11375 0.21 -0.3
2,291,792 + A4249_RS11375 0.21 -0.9
2,291,792 + A4249_RS11375 0.21 -0.0
2,291,792 + A4249_RS11375 0.21 -0.9
2,291,792 + A4249_RS11375 0.21 +0.6
2,291,793 - A4249_RS11375 0.21 -2.0
2,291,793 - A4249_RS11375 0.21 -1.0
2,291,793 - A4249_RS11375 0.21 -0.2
2,291,793 - A4249_RS11375 0.21 -0.8
2,291,793 - A4249_RS11375 0.21 -0.7
2,291,843 + A4249_RS11375 0.25 -0.5
2,291,843 + A4249_RS11375 0.25 +0.4
2,291,844 - A4249_RS11375 0.25 -2.3
2,291,844 - A4249_RS11375 0.25 +0.6
2,291,844 - A4249_RS11375 0.25 -0.7
2,291,844 - A4249_RS11375 0.25 -0.1
2,291,855 + A4249_RS11375 0.26 +0.2
2,291,855 + A4249_RS11375 0.26 +0.4
2,291,855 + A4249_RS11375 0.26 +0.0
2,291,855 + A4249_RS11375 0.26 +0.9
2,291,856 - A4249_RS11375 0.27 -0.4
2,291,856 - A4249_RS11375 0.27 +1.1
2,291,856 - A4249_RS11375 0.27 -0.8
2,291,856 - A4249_RS11375 0.27 -0.2
2,291,873 + A4249_RS11375 0.28 -0.1
2,291,874 - A4249_RS11375 0.28 -0.5
2,291,874 - A4249_RS11375 0.28 +0.1
2,291,874 - A4249_RS11375 0.28 +0.8
2,291,874 - A4249_RS11375 0.28 -0.6
2,292,141 + A4249_RS11375 0.52 -0.8
2,292,206 + A4249_RS11375 0.58 -0.0
2,292,207 - A4249_RS11375 0.58 +0.2
2,292,207 - A4249_RS11375 0.58 +0.0
2,292,207 - A4249_RS11375 0.58 +0.5
2,292,272 + A4249_RS11375 0.64 +1.2
2,292,272 + A4249_RS11375 0.64 -1.3
2,292,272 + A4249_RS11375 0.64 -1.3
2,292,272 + A4249_RS11375 0.64 -0.0
2,292,272 + A4249_RS11375 0.64 +1.0
2,292,272 + A4249_RS11375 0.64 +0.2
2,292,272 + A4249_RS11375 0.64 +0.1
2,292,272 + A4249_RS11375 0.64 -2.1
2,292,273 - A4249_RS11375 0.64 -0.2
2,292,273 - A4249_RS11375 0.64 -1.5
2,292,273 - A4249_RS11375 0.64 -0.8
2,292,273 - A4249_RS11375 0.64 -0.4
2,292,273 - A4249_RS11375 0.64 -0.5
2,292,476 + A4249_RS11375 0.82 -0.5
2,292,476 + A4249_RS11375 0.82 -0.3
2,292,477 - A4249_RS11375 0.83 -0.1
2,292,477 - A4249_RS11375 0.83 +1.1
2,292,477 - A4249_RS11375 0.83 +1.1
2,292,640 + -0.3
2,292,641 - -0.6
2,292,641 - +0.2
2,292,641 - -0.9
2,292,641 - +0.2
2,292,641 - -1.3
2,292,648 + -0.2
2,292,649 - +0.2
2,292,649 - -0.1
2,292,675 + -0.5
2,292,675 + +0.2
2,292,676 - -0.7
2,292,819 + A4249_RS11380 0.20 -0.2
2,292,819 + A4249_RS11380 0.20 -0.6
2,292,820 - A4249_RS11380 0.20 -0.5
2,292,834 - A4249_RS11380 0.23 -0.4
2,292,854 + A4249_RS11380 0.27 -0.9
2,292,854 + A4249_RS11380 0.27 -1.0
2,292,854 + A4249_RS11380 0.27 -0.2
2,292,854 + A4249_RS11380 0.27 -0.8
2,292,854 + A4249_RS11380 0.27 -0.9
2,292,854 + A4249_RS11380 0.27 -0.9
2,292,854 + A4249_RS11380 0.27 -0.1
2,292,854 + A4249_RS11380 0.27 +1.2
2,292,855 - A4249_RS11380 0.27 +2.0
2,292,855 - A4249_RS11380 0.27 +0.6
2,292,855 - A4249_RS11380 0.27 +0.2
2,292,855 - A4249_RS11380 0.27 -0.3
2,292,855 - A4249_RS11380 0.27 +1.5
2,292,855 - A4249_RS11380 0.27 -1.0
2,292,855 - A4249_RS11380 0.27 +0.6
2,292,855 - A4249_RS11380 0.27 +0.8
2,292,855 - A4249_RS11380 0.27 +0.3
2,292,855 - A4249_RS11380 0.27 +0.2
2,292,855 - A4249_RS11380 0.27 +0.4
2,292,855 - A4249_RS11380 0.27 -0.8
2,292,855 - A4249_RS11380 0.27 +0.8
2,292,968 - A4249_RS11380 0.49 -1.3
2,292,995 + A4249_RS11380 0.54 -0.8
2,292,995 + A4249_RS11380 0.54 +1.8
2,292,996 - A4249_RS11380 0.54 -0.3
2,293,064 + A4249_RS11380 0.68 +0.8
2,293,064 + A4249_RS11380 0.68 -0.5
2,293,064 + A4249_RS11380 0.68 -0.1
2,293,064 + A4249_RS11380 0.68 +0.0
2,293,064 + A4249_RS11380 0.68 +0.2
2,293,064 + A4249_RS11380 0.68 +0.4
2,293,064 + A4249_RS11380 0.68 -0.7
2,293,064 + A4249_RS11380 0.68 -1.6
2,293,064 + A4249_RS11380 0.68 -1.6
2,293,064 + A4249_RS11380 0.68 -0.3
2,293,065 - A4249_RS11380 0.68 +0.8
2,293,065 - A4249_RS11380 0.68 +0.4
2,293,065 - A4249_RS11380 0.68 -0.1
2,293,065 - A4249_RS11380 0.68 -0.3
2,293,065 - A4249_RS11380 0.68 +0.1
2,293,065 - A4249_RS11380 0.68 -1.6
2,293,065 - A4249_RS11380 0.68 +0.8
2,293,065 - A4249_RS11380 0.68 -1.2
2,293,065 - A4249_RS11380 0.68 -0.8
2,293,065 - A4249_RS11380 0.68 +0.7
2,293,065 - A4249_RS11380 0.68 -2.2
2,293,435 - A4249_RS11385 0.19 -0.5
2,293,435 - A4249_RS11385 0.19 -0.4
2,293,554 + A4249_RS11385 0.29 -0.1
2,293,611 + A4249_RS11385 0.33 +0.4
2,293,611 + A4249_RS11385 0.33 -0.2
2,293,612 - A4249_RS11385 0.33 +0.4
2,293,612 - A4249_RS11385 0.33 -0.1
2,293,612 - A4249_RS11385 0.33 +0.2
2,293,612 - A4249_RS11385 0.33 -2.0
2,293,620 + A4249_RS11385 0.34 -0.3
2,293,620 + A4249_RS11385 0.34 -0.0
2,293,620 + A4249_RS11385 0.34 +0.6
2,293,620 + A4249_RS11385 0.34 -0.3
2,293,620 + A4249_RS11385 0.34 -0.5
2,293,620 + A4249_RS11385 0.34 +0.6
2,293,620 + A4249_RS11385 0.34 -1.2
2,293,620 + A4249_RS11385 0.34 -0.4
2,293,620 + A4249_RS11385 0.34 +0.0
2,293,621 - A4249_RS11385 0.34 -0.1
2,293,621 - A4249_RS11385 0.34 -0.0
2,293,621 - A4249_RS11385 0.34 +0.1
2,293,621 - A4249_RS11385 0.34 -0.1
2,293,621 - A4249_RS11385 0.34 +0.6
2,293,621 - A4249_RS11385 0.34 -0.2
2,293,621 - A4249_RS11385 0.34 -0.2
2,293,621 - A4249_RS11385 0.34 -0.1
2,293,621 - A4249_RS11385 0.34 +0.2
2,293,621 - A4249_RS11385 0.34 -0.5
2,293,621 - A4249_RS11385 0.34 -0.2
2,293,621 - A4249_RS11385 0.34 -1.1
2,293,621 - A4249_RS11385 0.34 +0.8
2,293,621 - A4249_RS11385 0.34 +0.5
2,293,621 - A4249_RS11385 0.34 +1.1

Or see this region's nucleotide sequence