Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10925 and A4249_RS10930 are separated by 289 nucleotides A4249_RS10930 and A4249_RS10935 are separated by 164 nucleotides A4249_RS10935 and A4249_RS10940 are separated by 80 nucleotides
A4249_RS10925: A4249_RS10925 - TIGR02300 family protein, at 2,196,529 to 2,196,990
_RS10925
A4249_RS10930: A4249_RS10930 - tRNA-Ala, at 2,197,280 to 2,197,355
_RS10930
A4249_RS10935: A4249_RS10935 - hypothetical protein, at 2,197,520 to 2,197,843
_RS10935
A4249_RS10940: A4249_RS10940 - ribosome small subunit-dependent GTPase A, at 2,197,924 to 2,199,000
_RS10940
Position (kb)
2197
2198 Strain fitness (log2 ratio)
-2
-1
0
1 at 2196.989 kb on - strand at 2197.154 kb on - strand at 2197.656 kb on + strand, within A4249_RS10935 at 2197.657 kb on - strand, within A4249_RS10935 at 2197.657 kb on - strand, within A4249_RS10935 at 2197.657 kb on - strand, within A4249_RS10935 at 2197.675 kb on - strand, within A4249_RS10935 at 2197.737 kb on + strand, within A4249_RS10935 at 2197.737 kb on + strand, within A4249_RS10935 at 2197.738 kb on - strand, within A4249_RS10935 at 2197.738 kb on - strand, within A4249_RS10935 at 2197.856 kb on + strand at 2197.856 kb on + strand at 2197.856 kb on + strand at 2197.857 kb on - strand at 2197.857 kb on - strand at 2197.857 kb on - strand at 2197.862 kb on + strand at 2197.862 kb on + strand at 2197.862 kb on + strand at 2197.862 kb on + strand at 2197.863 kb on - strand at 2197.863 kb on - strand at 2197.863 kb on - strand at 2197.863 kb on - strand at 2197.876 kb on - strand at 2197.967 kb on + strand at 2197.968 kb on - strand at 2197.968 kb on - strand at 2197.968 kb on - strand at 2198.304 kb on + strand, within A4249_RS10940 at 2198.304 kb on + strand, within A4249_RS10940 at 2198.304 kb on + strand, within A4249_RS10940 at 2198.305 kb on - strand, within A4249_RS10940 at 2198.305 kb on - strand, within A4249_RS10940 at 2198.305 kb on - strand, within A4249_RS10940 at 2198.305 kb on - strand, within A4249_RS10940 at 2198.305 kb on - strand, within A4249_RS10940 at 2198.617 kb on + strand, within A4249_RS10940 at 2198.701 kb on + strand, within A4249_RS10940 at 2198.701 kb on + strand, within A4249_RS10940 at 2198.701 kb on + strand, within A4249_RS10940 at 2198.701 kb on + strand, within A4249_RS10940 at 2198.701 kb on + strand, within A4249_RS10940 at 2198.701 kb on + strand, within A4249_RS10940 at 2198.701 kb on + strand, within A4249_RS10940 at 2198.701 kb on + strand, within A4249_RS10940 at 2198.702 kb on - strand, within A4249_RS10940 at 2198.702 kb on - strand, within A4249_RS10940 at 2198.702 kb on - strand, within A4249_RS10940 at 2198.702 kb on - strand, within A4249_RS10940 at 2198.702 kb on - strand, within A4249_RS10940 at 2198.702 kb on - strand, within A4249_RS10940 at 2198.702 kb on - strand, within A4249_RS10940
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,196,989 - -1.1 2,197,154 - +0.3 2,197,656 + A4249_RS10935 0.42 -0.2 2,197,657 - A4249_RS10935 0.42 -1.1 2,197,657 - A4249_RS10935 0.42 -0.1 2,197,657 - A4249_RS10935 0.42 +0.1 2,197,675 - A4249_RS10935 0.48 -0.1 2,197,737 + A4249_RS10935 0.67 -1.1 2,197,737 + A4249_RS10935 0.67 -1.2 2,197,738 - A4249_RS10935 0.67 -0.3 2,197,738 - A4249_RS10935 0.67 -1.3 2,197,856 + +0.5 2,197,856 + -0.5 2,197,856 + -2.0 2,197,857 - -0.3 2,197,857 - -0.3 2,197,857 - -0.6 2,197,862 + +0.6 2,197,862 + -0.6 2,197,862 + -0.2 2,197,862 + +0.5 2,197,863 - -0.3 2,197,863 - -0.0 2,197,863 - -0.5 2,197,863 - +0.3 2,197,876 - +0.1 2,197,967 + +0.0 2,197,968 - +0.1 2,197,968 - -0.1 2,197,968 - -0.1 2,198,304 + A4249_RS10940 0.35 +0.9 2,198,304 + A4249_RS10940 0.35 -0.2 2,198,304 + A4249_RS10940 0.35 +0.2 2,198,305 - A4249_RS10940 0.35 -0.1 2,198,305 - A4249_RS10940 0.35 +0.1 2,198,305 - A4249_RS10940 0.35 +0.6 2,198,305 - A4249_RS10940 0.35 -0.3 2,198,305 - A4249_RS10940 0.35 +1.1 2,198,617 + A4249_RS10940 0.64 -0.2 2,198,701 + A4249_RS10940 0.72 +0.1 2,198,701 + A4249_RS10940 0.72 -0.4 2,198,701 + A4249_RS10940 0.72 -0.4 2,198,701 + A4249_RS10940 0.72 +0.4 2,198,701 + A4249_RS10940 0.72 +0.4 2,198,701 + A4249_RS10940 0.72 -1.9 2,198,701 + A4249_RS10940 0.72 -0.5 2,198,701 + A4249_RS10940 0.72 +0.1 2,198,702 - A4249_RS10940 0.72 -0.3 2,198,702 - A4249_RS10940 0.72 +0.8 2,198,702 - A4249_RS10940 0.72 -1.1 2,198,702 - A4249_RS10940 0.72 +0.1 2,198,702 - A4249_RS10940 0.72 +0.2 2,198,702 - A4249_RS10940 0.72 -0.3 2,198,702 - A4249_RS10940 0.72 -0.1
Or see this region's nucleotide sequence