Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10730

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10725 and A4249_RS10730 overlap by 8 nucleotidesA4249_RS10730 and A4249_RS10735 are separated by 1 nucleotides A4249_RS10725: A4249_RS10725 - glucose-6-phosphate dehydrogenase, at 2,155,318 to 2,156,778 _RS10725 A4249_RS10730: A4249_RS10730 - 6-phosphogluconolactonase, at 2,156,771 to 2,157,487 _RS10730 A4249_RS10735: A4249_RS10735 - phosphogluconate dehydratase, at 2,157,489 to 2,159,378 _RS10735 Position (kb) 2156 2157 2158Strain fitness (log2 ratio) -1 0 1at 2157.562 kb on - strandat 2157.715 kb on - strand, within A4249_RS10735at 2157.715 kb on - strand, within A4249_RS10735at 2157.715 kb on - strand, within A4249_RS10735at 2157.715 kb on - strand, within A4249_RS10735at 2158.082 kb on - strand, within A4249_RS10735

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,157,562 - +0.8
2,157,715 - A4249_RS10735 0.12 -0.8
2,157,715 - A4249_RS10735 0.12 -0.3
2,157,715 - A4249_RS10735 0.12 +0.0
2,157,715 - A4249_RS10735 0.12 +1.2
2,158,082 - A4249_RS10735 0.31 +0.0

Or see this region's nucleotide sequence