Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10655

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10645 and A4249_RS10650 are separated by 67 nucleotidesA4249_RS10650 and A4249_RS10655 are separated by 76 nucleotidesA4249_RS10655 and A4249_RS10660 are separated by 95 nucleotidesA4249_RS10660 and A4249_RS10665 are separated by 61 nucleotides A4249_RS10645: A4249_RS10645 - PepSY-associated TM helix domain-containing protein, at 2,139,177 to 2,139,854 _RS10645 A4249_RS10650: A4249_RS10650 - Fe2+-dependent dioxygenase, at 2,139,922 to 2,140,608 _RS10650 A4249_RS10655: A4249_RS10655 - TonB-dependent receptor, at 2,140,685 to 2,143,081 _RS10655 A4249_RS10660: A4249_RS10660 - peptidase, at 2,143,177 to 2,143,962 _RS10660 A4249_RS10665: A4249_RS10665 - transglutaminase family protein, at 2,144,024 to 2,144,866 _RS10665 Position (kb) 2140 2141 2142 2143 2144Strain fitness (log2 ratio) -1 0 1 2at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.897 kb on + strandat 2140.666 kb on + strandat 2140.667 kb on - strandat 2140.667 kb on - strandat 2140.686 kb on + strandat 2140.687 kb on - strandat 2140.867 kb on - strandat 2140.926 kb on + strand, within A4249_RS10655at 2140.930 kb on - strand, within A4249_RS10655at 2141.608 kb on - strand, within A4249_RS10655at 2141.917 kb on - strand, within A4249_RS10655at 2142.049 kb on - strand, within A4249_RS10655at 2142.079 kb on - strand, within A4249_RS10655at 2142.079 kb on - strand, within A4249_RS10655at 2143.082 kb on - strandat 2143.082 kb on - strandat 2143.301 kb on + strand, within A4249_RS10660at 2143.301 kb on + strand, within A4249_RS10660at 2143.302 kb on - strand, within A4249_RS10660at 2143.302 kb on - strand, within A4249_RS10660at 2143.302 kb on - strand, within A4249_RS10660at 2143.302 kb on - strand, within A4249_RS10660at 2143.302 kb on - strand, within A4249_RS10660at 2143.514 kb on + strand, within A4249_RS10660at 2143.521 kb on + strand, within A4249_RS10660at 2143.556 kb on + strand, within A4249_RS10660at 2143.557 kb on - strand, within A4249_RS10660at 2143.557 kb on - strand, within A4249_RS10660at 2143.565 kb on + strand, within A4249_RS10660at 2143.565 kb on + strand, within A4249_RS10660at 2143.565 kb on + strand, within A4249_RS10660at 2143.566 kb on - strand, within A4249_RS10660at 2143.566 kb on - strand, within A4249_RS10660at 2143.566 kb on - strand, within A4249_RS10660at 2143.566 kb on - strand, within A4249_RS10660at 2143.566 kb on - strand, within A4249_RS10660at 2143.566 kb on - strand, within A4249_RS10660at 2143.566 kb on - strand, within A4249_RS10660at 2143.653 kb on + strand, within A4249_RS10660at 2143.653 kb on + strand, within A4249_RS10660at 2143.653 kb on + strand, within A4249_RS10660at 2143.654 kb on - strand, within A4249_RS10660at 2143.730 kb on - strand, within A4249_RS10660at 2143.853 kb on + strand, within A4249_RS10660at 2143.853 kb on + strand, within A4249_RS10660at 2143.854 kb on - strand, within A4249_RS10660at 2143.854 kb on - strand, within A4249_RS10660at 2143.854 kb on - strand, within A4249_RS10660at 2143.854 kb on - strand, within A4249_RS10660at 2143.854 kb on - strand, within A4249_RS10660at 2143.871 kb on + strand, within A4249_RS10660at 2143.872 kb on - strand, within A4249_RS10660at 2143.948 kb on + strandat 2143.948 kb on + strandat 2143.948 kb on + strandat 2143.949 kb on - strandat 2143.955 kb on + strandat 2143.955 kb on + strandat 2143.955 kb on + strandat 2143.955 kb on + strandat 2143.955 kb on + strandat 2143.955 kb on + strandat 2143.955 kb on + strandat 2143.955 kb on + strandat 2143.955 kb on + strandat 2143.956 kb on - strandat 2143.956 kb on - strandat 2143.956 kb on - strandat 2143.956 kb on - strandat 2143.956 kb on - strandat 2143.956 kb on - strandat 2143.970 kb on + strandat 2143.970 kb on + strandat 2144.004 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,139,749 + A4249_RS10645 0.84 +0.4
2,139,749 + A4249_RS10645 0.84 +0.8
2,139,749 + A4249_RS10645 0.84 -0.2
2,139,749 + A4249_RS10645 0.84 -0.2
2,139,749 + A4249_RS10645 0.84 -0.6
2,139,749 + A4249_RS10645 0.84 -0.8
2,139,749 + A4249_RS10645 0.84 -0.8
2,139,749 + A4249_RS10645 0.84 -1.2
2,139,749 + A4249_RS10645 0.84 +0.4
2,139,749 + A4249_RS10645 0.84 +0.5
2,139,749 + A4249_RS10645 0.84 -0.0
2,139,749 + A4249_RS10645 0.84 -0.8
2,139,749 + A4249_RS10645 0.84 -0.1
2,139,749 + A4249_RS10645 0.84 -0.5
2,139,749 + A4249_RS10645 0.84 +0.2
2,139,750 - A4249_RS10645 0.85 -0.3
2,139,750 - A4249_RS10645 0.85 -0.3
2,139,750 - A4249_RS10645 0.85 +0.4
2,139,750 - A4249_RS10645 0.85 +0.8
2,139,750 - A4249_RS10645 0.85 -0.2
2,139,750 - A4249_RS10645 0.85 +0.5
2,139,750 - A4249_RS10645 0.85 +0.5
2,139,750 - A4249_RS10645 0.85 +1.1
2,139,897 + -0.0
2,140,666 + +0.3
2,140,667 - +0.4
2,140,667 - -0.4
2,140,686 + +1.4
2,140,687 - -0.4
2,140,867 - +0.2
2,140,926 + A4249_RS10655 0.10 +0.8
2,140,930 - A4249_RS10655 0.10 +0.2
2,141,608 - A4249_RS10655 0.39 +1.2
2,141,917 - A4249_RS10655 0.51 +0.8
2,142,049 - A4249_RS10655 0.57 +0.2
2,142,079 - A4249_RS10655 0.58 -0.2
2,142,079 - A4249_RS10655 0.58 +0.8
2,143,082 - +0.4
2,143,082 - +0.5
2,143,301 + A4249_RS10660 0.16 -1.7
2,143,301 + A4249_RS10660 0.16 -0.9
2,143,302 - A4249_RS10660 0.16 +1.1
2,143,302 - A4249_RS10660 0.16 -0.3
2,143,302 - A4249_RS10660 0.16 +0.1
2,143,302 - A4249_RS10660 0.16 -1.0
2,143,302 - A4249_RS10660 0.16 -0.2
2,143,514 + A4249_RS10660 0.43 +0.2
2,143,521 + A4249_RS10660 0.44 -0.4
2,143,556 + A4249_RS10660 0.48 -0.4
2,143,557 - A4249_RS10660 0.48 -0.7
2,143,557 - A4249_RS10660 0.48 -1.2
2,143,565 + A4249_RS10660 0.49 +1.4
2,143,565 + A4249_RS10660 0.49 +0.0
2,143,565 + A4249_RS10660 0.49 +0.4
2,143,566 - A4249_RS10660 0.49 -0.2
2,143,566 - A4249_RS10660 0.49 +0.1
2,143,566 - A4249_RS10660 0.49 -0.6
2,143,566 - A4249_RS10660 0.49 +1.5
2,143,566 - A4249_RS10660 0.49 +0.2
2,143,566 - A4249_RS10660 0.49 -0.5
2,143,566 - A4249_RS10660 0.49 -0.3
2,143,653 + A4249_RS10660 0.61 -0.2
2,143,653 + A4249_RS10660 0.61 +0.6
2,143,653 + A4249_RS10660 0.61 +1.4
2,143,654 - A4249_RS10660 0.61 +1.5
2,143,730 - A4249_RS10660 0.70 -0.2
2,143,853 + A4249_RS10660 0.86 +0.8
2,143,853 + A4249_RS10660 0.86 -0.2
2,143,854 - A4249_RS10660 0.86 +0.5
2,143,854 - A4249_RS10660 0.86 -0.4
2,143,854 - A4249_RS10660 0.86 +1.1
2,143,854 - A4249_RS10660 0.86 +0.4
2,143,854 - A4249_RS10660 0.86 +0.1
2,143,871 + A4249_RS10660 0.88 +0.1
2,143,872 - A4249_RS10660 0.88 -0.5
2,143,948 + +0.5
2,143,948 + +0.2
2,143,948 + -0.6
2,143,949 - -0.8
2,143,955 + +0.5
2,143,955 + +0.2
2,143,955 + -0.2
2,143,955 + +0.3
2,143,955 + -0.3
2,143,955 + -0.8
2,143,955 + +0.3
2,143,955 + -0.2
2,143,955 + +0.3
2,143,956 - +0.2
2,143,956 - -0.3
2,143,956 - +0.3
2,143,956 - -0.5
2,143,956 - -1.2
2,143,956 - +0.6
2,143,970 + +0.8
2,143,970 + +2.4
2,144,004 - +1.0

Or see this region's nucleotide sequence