Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10645 and A4249_RS10650 are separated by 67 nucleotides A4249_RS10650 and A4249_RS10655 are separated by 76 nucleotides A4249_RS10655 and A4249_RS10660 are separated by 95 nucleotides A4249_RS10660 and A4249_RS10665 are separated by 61 nucleotides
A4249_RS10645: A4249_RS10645 - PepSY-associated TM helix domain-containing protein, at 2,139,177 to 2,139,854
_RS10645
A4249_RS10650: A4249_RS10650 - Fe2+-dependent dioxygenase, at 2,139,922 to 2,140,608
_RS10650
A4249_RS10655: A4249_RS10655 - TonB-dependent receptor, at 2,140,685 to 2,143,081
_RS10655
A4249_RS10660: A4249_RS10660 - peptidase, at 2,143,177 to 2,143,962
_RS10660
A4249_RS10665: A4249_RS10665 - transglutaminase family protein, at 2,144,024 to 2,144,866
_RS10665
Position (kb)
2140
2141
2142
2143
2144 Strain fitness (log2 ratio)
-1
0
1
2 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.897 kb on + strand at 2140.666 kb on + strand at 2140.667 kb on - strand at 2140.667 kb on - strand at 2140.686 kb on + strand at 2140.687 kb on - strand at 2140.867 kb on - strand at 2140.926 kb on + strand, within A4249_RS10655 at 2140.930 kb on - strand, within A4249_RS10655 at 2141.608 kb on - strand, within A4249_RS10655 at 2141.917 kb on - strand, within A4249_RS10655 at 2142.049 kb on - strand, within A4249_RS10655 at 2142.079 kb on - strand, within A4249_RS10655 at 2142.079 kb on - strand, within A4249_RS10655 at 2143.082 kb on - strand at 2143.082 kb on - strand at 2143.301 kb on + strand, within A4249_RS10660 at 2143.301 kb on + strand, within A4249_RS10660 at 2143.302 kb on - strand, within A4249_RS10660 at 2143.302 kb on - strand, within A4249_RS10660 at 2143.302 kb on - strand, within A4249_RS10660 at 2143.302 kb on - strand, within A4249_RS10660 at 2143.302 kb on - strand, within A4249_RS10660 at 2143.514 kb on + strand, within A4249_RS10660 at 2143.521 kb on + strand, within A4249_RS10660 at 2143.556 kb on + strand, within A4249_RS10660 at 2143.557 kb on - strand, within A4249_RS10660 at 2143.557 kb on - strand, within A4249_RS10660 at 2143.565 kb on + strand, within A4249_RS10660 at 2143.565 kb on + strand, within A4249_RS10660 at 2143.565 kb on + strand, within A4249_RS10660 at 2143.566 kb on - strand, within A4249_RS10660 at 2143.566 kb on - strand, within A4249_RS10660 at 2143.566 kb on - strand, within A4249_RS10660 at 2143.566 kb on - strand, within A4249_RS10660 at 2143.566 kb on - strand, within A4249_RS10660 at 2143.566 kb on - strand, within A4249_RS10660 at 2143.566 kb on - strand, within A4249_RS10660 at 2143.653 kb on + strand, within A4249_RS10660 at 2143.653 kb on + strand, within A4249_RS10660 at 2143.653 kb on + strand, within A4249_RS10660 at 2143.654 kb on - strand, within A4249_RS10660 at 2143.730 kb on - strand, within A4249_RS10660 at 2143.853 kb on + strand, within A4249_RS10660 at 2143.853 kb on + strand, within A4249_RS10660 at 2143.854 kb on - strand, within A4249_RS10660 at 2143.854 kb on - strand, within A4249_RS10660 at 2143.854 kb on - strand, within A4249_RS10660 at 2143.854 kb on - strand, within A4249_RS10660 at 2143.854 kb on - strand, within A4249_RS10660 at 2143.871 kb on + strand, within A4249_RS10660 at 2143.872 kb on - strand, within A4249_RS10660 at 2143.948 kb on + strand at 2143.948 kb on + strand at 2143.948 kb on + strand at 2143.949 kb on - strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.956 kb on - strand at 2143.956 kb on - strand at 2143.956 kb on - strand at 2143.956 kb on - strand at 2143.956 kb on - strand at 2143.956 kb on - strand at 2143.970 kb on + strand at 2143.970 kb on + strand at 2144.004 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,139,749 + A4249_RS10645 0.84 +0.4 2,139,749 + A4249_RS10645 0.84 +0.8 2,139,749 + A4249_RS10645 0.84 -0.2 2,139,749 + A4249_RS10645 0.84 -0.2 2,139,749 + A4249_RS10645 0.84 -0.6 2,139,749 + A4249_RS10645 0.84 -0.8 2,139,749 + A4249_RS10645 0.84 -0.8 2,139,749 + A4249_RS10645 0.84 -1.2 2,139,749 + A4249_RS10645 0.84 +0.4 2,139,749 + A4249_RS10645 0.84 +0.5 2,139,749 + A4249_RS10645 0.84 -0.0 2,139,749 + A4249_RS10645 0.84 -0.8 2,139,749 + A4249_RS10645 0.84 -0.1 2,139,749 + A4249_RS10645 0.84 -0.5 2,139,749 + A4249_RS10645 0.84 +0.2 2,139,750 - A4249_RS10645 0.85 -0.3 2,139,750 - A4249_RS10645 0.85 -0.3 2,139,750 - A4249_RS10645 0.85 +0.4 2,139,750 - A4249_RS10645 0.85 +0.8 2,139,750 - A4249_RS10645 0.85 -0.2 2,139,750 - A4249_RS10645 0.85 +0.5 2,139,750 - A4249_RS10645 0.85 +0.5 2,139,750 - A4249_RS10645 0.85 +1.1 2,139,897 + -0.0 2,140,666 + +0.3 2,140,667 - +0.4 2,140,667 - -0.4 2,140,686 + +1.4 2,140,687 - -0.4 2,140,867 - +0.2 2,140,926 + A4249_RS10655 0.10 +0.8 2,140,930 - A4249_RS10655 0.10 +0.2 2,141,608 - A4249_RS10655 0.39 +1.2 2,141,917 - A4249_RS10655 0.51 +0.8 2,142,049 - A4249_RS10655 0.57 +0.2 2,142,079 - A4249_RS10655 0.58 -0.2 2,142,079 - A4249_RS10655 0.58 +0.8 2,143,082 - +0.4 2,143,082 - +0.5 2,143,301 + A4249_RS10660 0.16 -1.7 2,143,301 + A4249_RS10660 0.16 -0.9 2,143,302 - A4249_RS10660 0.16 +1.1 2,143,302 - A4249_RS10660 0.16 -0.3 2,143,302 - A4249_RS10660 0.16 +0.1 2,143,302 - A4249_RS10660 0.16 -1.0 2,143,302 - A4249_RS10660 0.16 -0.2 2,143,514 + A4249_RS10660 0.43 +0.2 2,143,521 + A4249_RS10660 0.44 -0.4 2,143,556 + A4249_RS10660 0.48 -0.4 2,143,557 - A4249_RS10660 0.48 -0.7 2,143,557 - A4249_RS10660 0.48 -1.2 2,143,565 + A4249_RS10660 0.49 +1.4 2,143,565 + A4249_RS10660 0.49 +0.0 2,143,565 + A4249_RS10660 0.49 +0.4 2,143,566 - A4249_RS10660 0.49 -0.2 2,143,566 - A4249_RS10660 0.49 +0.1 2,143,566 - A4249_RS10660 0.49 -0.6 2,143,566 - A4249_RS10660 0.49 +1.5 2,143,566 - A4249_RS10660 0.49 +0.2 2,143,566 - A4249_RS10660 0.49 -0.5 2,143,566 - A4249_RS10660 0.49 -0.3 2,143,653 + A4249_RS10660 0.61 -0.2 2,143,653 + A4249_RS10660 0.61 +0.6 2,143,653 + A4249_RS10660 0.61 +1.4 2,143,654 - A4249_RS10660 0.61 +1.5 2,143,730 - A4249_RS10660 0.70 -0.2 2,143,853 + A4249_RS10660 0.86 +0.8 2,143,853 + A4249_RS10660 0.86 -0.2 2,143,854 - A4249_RS10660 0.86 +0.5 2,143,854 - A4249_RS10660 0.86 -0.4 2,143,854 - A4249_RS10660 0.86 +1.1 2,143,854 - A4249_RS10660 0.86 +0.4 2,143,854 - A4249_RS10660 0.86 +0.1 2,143,871 + A4249_RS10660 0.88 +0.1 2,143,872 - A4249_RS10660 0.88 -0.5 2,143,948 + +0.5 2,143,948 + +0.2 2,143,948 + -0.6 2,143,949 - -0.8 2,143,955 + +0.5 2,143,955 + +0.2 2,143,955 + -0.2 2,143,955 + +0.3 2,143,955 + -0.3 2,143,955 + -0.8 2,143,955 + +0.3 2,143,955 + -0.2 2,143,955 + +0.3 2,143,956 - +0.2 2,143,956 - -0.3 2,143,956 - +0.3 2,143,956 - -0.5 2,143,956 - -1.2 2,143,956 - +0.6 2,143,970 + +0.8 2,143,970 + +2.4 2,144,004 - +1.0
Or see this region's nucleotide sequence