Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10540 and A4249_RS10545 are separated by 206 nucleotides A4249_RS10545 and A4249_RS10550 are separated by 4 nucleotides A4249_RS10550 and A4249_RS10555 are separated by 58 nucleotides A4249_RS10555 and A4249_RS10560 overlap by 1 nucleotides A4249_RS10560 and A4249_RS10565 overlap by 4 nucleotides
A4249_RS10540: A4249_RS10540 - DEAD/DEAH box helicase, at 2,118,522 to 2,120,420
_RS10540
A4249_RS10545: A4249_RS10545 - flagellar basal body rod C-terminal domain-containing protein, at 2,120,627 to 2,120,836
_RS10545
A4249_RS10550: A4249_RS10550 - winged helix-turn-helix transcriptional regulator, at 2,120,841 to 2,121,524
_RS10550
A4249_RS10555: A4249_RS10555 - lactoylglutathione lyase, at 2,121,583 to 2,122,026
_RS10555
A4249_RS10560: A4249_RS10560 - SRPBCC family protein, at 2,122,026 to 2,122,487
_RS10560
A4249_RS10565: A4249_RS10565 - VOC family protein, at 2,122,484 to 2,122,966
_RS10565
Position (kb)
2120
2121
2122 Strain fitness (log2 ratio)
-2
-1
0
1 at 2120.045 kb on + strand, within A4249_RS10540 at 2120.046 kb on - strand, within A4249_RS10540 at 2120.046 kb on - strand, within A4249_RS10540 at 2120.131 kb on + strand, within A4249_RS10540 at 2120.132 kb on - strand, within A4249_RS10540 at 2120.365 kb on + strand at 2120.366 kb on - strand at 2120.421 kb on - strand at 2120.421 kb on - strand at 2120.510 kb on + strand at 2120.510 kb on + strand at 2120.510 kb on + strand at 2120.510 kb on + strand at 2120.511 kb on - strand at 2120.511 kb on - strand at 2120.511 kb on - strand at 2120.511 kb on - strand at 2120.511 kb on - strand at 2120.511 kb on - strand at 2120.512 kb on + strand at 2120.512 kb on + strand at 2120.512 kb on + strand at 2120.512 kb on + strand at 2120.512 kb on + strand at 2120.512 kb on + strand at 2120.512 kb on + strand at 2120.512 kb on + strand at 2120.512 kb on + strand at 2120.513 kb on - strand at 2120.513 kb on - strand at 2120.513 kb on - strand at 2120.513 kb on - strand at 2120.513 kb on - strand at 2120.513 kb on - strand at 2120.513 kb on - strand at 2120.513 kb on - strand at 2120.513 kb on - strand at 2120.513 kb on - strand at 2120.513 kb on - strand at 2120.513 kb on - strand at 2120.513 kb on - strand at 2120.513 kb on - strand at 2120.513 kb on - strand at 2120.520 kb on + strand at 2120.520 kb on + strand at 2120.520 kb on + strand at 2120.521 kb on - strand at 2120.521 kb on - strand at 2120.521 kb on - strand at 2120.521 kb on - strand at 2120.641 kb on + strand at 2120.641 kb on + strand at 2120.641 kb on + strand at 2120.959 kb on + strand, within A4249_RS10550 at 2121.242 kb on - strand, within A4249_RS10550 at 2121.242 kb on - strand, within A4249_RS10550 at 2121.262 kb on + strand, within A4249_RS10550 at 2121.262 kb on + strand, within A4249_RS10550 at 2121.262 kb on + strand, within A4249_RS10550 at 2121.263 kb on - strand, within A4249_RS10550 at 2121.263 kb on - strand, within A4249_RS10550 at 2121.484 kb on + strand at 2121.484 kb on + strand at 2121.485 kb on - strand at 2121.563 kb on + strand at 2121.563 kb on + strand at 2121.563 kb on + strand at 2121.563 kb on + strand at 2121.563 kb on + strand at 2121.563 kb on + strand at 2121.564 kb on - strand at 2121.564 kb on - strand at 2121.564 kb on - strand at 2121.564 kb on - strand at 2121.643 kb on + strand, within A4249_RS10555 at 2121.643 kb on + strand, within A4249_RS10555 at 2121.643 kb on + strand, within A4249_RS10555 at 2121.644 kb on - strand, within A4249_RS10555 at 2121.644 kb on - strand, within A4249_RS10555 at 2121.644 kb on - strand, within A4249_RS10555 at 2121.644 kb on - strand, within A4249_RS10555 at 2121.678 kb on + strand, within A4249_RS10555 at 2121.699 kb on + strand, within A4249_RS10555 at 2121.699 kb on + strand, within A4249_RS10555 at 2121.699 kb on + strand, within A4249_RS10555 at 2121.699 kb on + strand, within A4249_RS10555 at 2121.699 kb on + strand, within A4249_RS10555 at 2121.699 kb on + strand, within A4249_RS10555 at 2121.700 kb on - strand, within A4249_RS10555 at 2121.700 kb on - strand, within A4249_RS10555 at 2121.700 kb on - strand, within A4249_RS10555 at 2121.700 kb on - strand, within A4249_RS10555 at 2121.700 kb on - strand, within A4249_RS10555 at 2121.700 kb on - strand, within A4249_RS10555 at 2121.877 kb on - strand, within A4249_RS10555 at 2121.913 kb on + strand, within A4249_RS10555 at 2121.913 kb on + strand, within A4249_RS10555 at 2121.913 kb on + strand, within A4249_RS10555 at 2121.913 kb on + strand, within A4249_RS10555 at 2121.913 kb on + strand, within A4249_RS10555 at 2121.913 kb on + strand, within A4249_RS10555 at 2121.914 kb on - strand, within A4249_RS10555 at 2121.914 kb on - strand, within A4249_RS10555 at 2121.914 kb on - strand, within A4249_RS10555 at 2121.914 kb on - strand, within A4249_RS10555 at 2121.914 kb on - strand, within A4249_RS10555 at 2121.914 kb on - strand, within A4249_RS10555 at 2121.914 kb on - strand, within A4249_RS10555 at 2121.914 kb on - strand, within A4249_RS10555 at 2121.914 kb on - strand, within A4249_RS10555 at 2121.914 kb on - strand, within A4249_RS10555 at 2121.914 kb on - strand, within A4249_RS10555 at 2121.914 kb on - strand, within A4249_RS10555 at 2121.914 kb on - strand, within A4249_RS10555 at 2121.914 kb on - strand, within A4249_RS10555 at 2121.914 kb on - strand, within A4249_RS10555 at 2122.095 kb on + strand, within A4249_RS10560 at 2122.095 kb on + strand, within A4249_RS10560 at 2122.095 kb on + strand, within A4249_RS10560 at 2122.095 kb on + strand, within A4249_RS10560 at 2122.095 kb on + strand, within A4249_RS10560 at 2122.095 kb on + strand, within A4249_RS10560 at 2122.095 kb on + strand, within A4249_RS10560 at 2122.095 kb on + strand, within A4249_RS10560 at 2122.095 kb on + strand, within A4249_RS10560 at 2122.106 kb on + strand, within A4249_RS10560 at 2122.221 kb on + strand, within A4249_RS10560 at 2122.221 kb on + strand, within A4249_RS10560 at 2122.222 kb on - strand, within A4249_RS10560 at 2122.362 kb on + strand, within A4249_RS10560 at 2122.362 kb on + strand, within A4249_RS10560 at 2122.362 kb on + strand, within A4249_RS10560
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,120,045 + A4249_RS10540 0.80 +0.4 2,120,046 - A4249_RS10540 0.80 +0.2 2,120,046 - A4249_RS10540 0.80 -0.9 2,120,131 + A4249_RS10540 0.85 -0.3 2,120,132 - A4249_RS10540 0.85 -0.6 2,120,365 + -0.1 2,120,366 - -0.2 2,120,421 - -0.5 2,120,421 - -0.2 2,120,510 + -0.8 2,120,510 + +0.0 2,120,510 + +0.6 2,120,510 + -0.7 2,120,511 - -0.3 2,120,511 - -0.4 2,120,511 - -1.0 2,120,511 - +0.8 2,120,511 - +0.4 2,120,511 - +0.9 2,120,512 + -0.6 2,120,512 + -0.5 2,120,512 + +0.2 2,120,512 + +0.8 2,120,512 + -0.0 2,120,512 + -0.4 2,120,512 + +0.5 2,120,512 + -0.2 2,120,512 + +0.1 2,120,513 - -0.6 2,120,513 - +0.4 2,120,513 - +0.1 2,120,513 - +0.6 2,120,513 - -0.7 2,120,513 - +0.1 2,120,513 - -0.3 2,120,513 - +0.3 2,120,513 - -1.2 2,120,513 - +0.4 2,120,513 - -0.6 2,120,513 - +0.6 2,120,513 - +0.9 2,120,513 - -1.5 2,120,513 - -0.7 2,120,520 + +0.5 2,120,520 + -0.2 2,120,520 + +0.3 2,120,521 - -0.6 2,120,521 - -1.0 2,120,521 - -0.2 2,120,521 - +0.9 2,120,641 + +0.9 2,120,641 + +0.7 2,120,641 + +0.3 2,120,959 + A4249_RS10550 0.17 +0.4 2,121,242 - A4249_RS10550 0.59 +0.2 2,121,242 - A4249_RS10550 0.59 +0.4 2,121,262 + A4249_RS10550 0.62 -2.5 2,121,262 + A4249_RS10550 0.62 +0.0 2,121,262 + A4249_RS10550 0.62 +1.0 2,121,263 - A4249_RS10550 0.62 -0.3 2,121,263 - A4249_RS10550 0.62 -1.0 2,121,484 + +0.1 2,121,484 + -0.2 2,121,485 - -0.1 2,121,563 + +0.0 2,121,563 + +0.5 2,121,563 + +0.4 2,121,563 + +0.7 2,121,563 + -0.4 2,121,563 + +0.2 2,121,564 - -0.2 2,121,564 - +0.5 2,121,564 - -0.0 2,121,564 - -0.2 2,121,643 + A4249_RS10555 0.14 -0.8 2,121,643 + A4249_RS10555 0.14 +0.9 2,121,643 + A4249_RS10555 0.14 +0.4 2,121,644 - A4249_RS10555 0.14 +0.3 2,121,644 - A4249_RS10555 0.14 -0.4 2,121,644 - A4249_RS10555 0.14 -0.7 2,121,644 - A4249_RS10555 0.14 -0.4 2,121,678 + A4249_RS10555 0.21 +0.0 2,121,699 + A4249_RS10555 0.26 +0.0 2,121,699 + A4249_RS10555 0.26 -0.1 2,121,699 + A4249_RS10555 0.26 +0.1 2,121,699 + A4249_RS10555 0.26 +0.5 2,121,699 + A4249_RS10555 0.26 -0.6 2,121,699 + A4249_RS10555 0.26 -0.7 2,121,700 - A4249_RS10555 0.26 -0.8 2,121,700 - A4249_RS10555 0.26 -0.3 2,121,700 - A4249_RS10555 0.26 -0.3 2,121,700 - A4249_RS10555 0.26 +0.3 2,121,700 - A4249_RS10555 0.26 +0.1 2,121,700 - A4249_RS10555 0.26 -0.3 2,121,877 - A4249_RS10555 0.66 -0.3 2,121,913 + A4249_RS10555 0.74 -1.2 2,121,913 + A4249_RS10555 0.74 +0.2 2,121,913 + A4249_RS10555 0.74 -0.6 2,121,913 + A4249_RS10555 0.74 +0.1 2,121,913 + A4249_RS10555 0.74 -1.9 2,121,913 + A4249_RS10555 0.74 +0.3 2,121,914 - A4249_RS10555 0.75 -0.1 2,121,914 - A4249_RS10555 0.75 +0.2 2,121,914 - A4249_RS10555 0.75 -0.2 2,121,914 - A4249_RS10555 0.75 +0.2 2,121,914 - A4249_RS10555 0.75 +0.7 2,121,914 - A4249_RS10555 0.75 +0.5 2,121,914 - A4249_RS10555 0.75 -0.1 2,121,914 - A4249_RS10555 0.75 -0.0 2,121,914 - A4249_RS10555 0.75 -0.4 2,121,914 - A4249_RS10555 0.75 -0.8 2,121,914 - A4249_RS10555 0.75 -0.1 2,121,914 - A4249_RS10555 0.75 -0.6 2,121,914 - A4249_RS10555 0.75 -0.2 2,121,914 - A4249_RS10555 0.75 -0.6 2,121,914 - A4249_RS10555 0.75 -0.5 2,122,095 + A4249_RS10560 0.15 +0.0 2,122,095 + A4249_RS10560 0.15 -0.3 2,122,095 + A4249_RS10560 0.15 -0.1 2,122,095 + A4249_RS10560 0.15 -0.2 2,122,095 + A4249_RS10560 0.15 -0.2 2,122,095 + A4249_RS10560 0.15 -0.1 2,122,095 + A4249_RS10560 0.15 +0.1 2,122,095 + A4249_RS10560 0.15 -0.8 2,122,095 + A4249_RS10560 0.15 +0.1 2,122,106 + A4249_RS10560 0.17 +0.3 2,122,221 + A4249_RS10560 0.42 +0.4 2,122,221 + A4249_RS10560 0.42 -0.5 2,122,222 - A4249_RS10560 0.42 +0.6 2,122,362 + A4249_RS10560 0.73 -0.5 2,122,362 + A4249_RS10560 0.73 +0.3 2,122,362 + A4249_RS10560 0.73 +0.8
Or see this region's nucleotide sequence