Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10190 and A4249_RS10195 overlap by 32 nucleotides A4249_RS10195 and A4249_RS10200 are separated by 23 nucleotides A4249_RS10200 and A4249_RS10205 are separated by 40 nucleotides A4249_RS10205 and A4249_RS10210 are separated by 174 nucleotides
A4249_RS10190: A4249_RS10190 - terminase family protein, at 2,043,087 to 2,044,256
_RS10190
A4249_RS10195: A4249_RS10195 - hypothetical protein, at 2,044,225 to 2,044,761
_RS10195
A4249_RS10200: A4249_RS10200 - YcgN family cysteine cluster protein, at 2,044,785 to 2,045,246
_RS10200
A4249_RS10205: A4249_RS10205 - SMR family transporter, at 2,045,287 to 2,045,625
_RS10205
A4249_RS10210: A4249_RS10210 - ABC-F family ATP-binding cassette domain-containing protein, at 2,045,800 to 2,047,617
_RS10210
Position (kb)
2044
2045
2046 Strain fitness (log2 ratio)
-2
-1
0
1 at 2043.973 kb on + strand, within A4249_RS10190 at 2043.973 kb on + strand, within A4249_RS10190 at 2043.974 kb on - strand, within A4249_RS10190 at 2043.974 kb on - strand, within A4249_RS10190 at 2043.974 kb on - strand, within A4249_RS10190 at 2044.281 kb on + strand, within A4249_RS10195 at 2044.282 kb on - strand, within A4249_RS10195 at 2044.282 kb on - strand, within A4249_RS10195 at 2044.282 kb on - strand, within A4249_RS10195 at 2044.391 kb on + strand, within A4249_RS10195 at 2044.391 kb on + strand, within A4249_RS10195 at 2044.391 kb on + strand, within A4249_RS10195 at 2044.391 kb on + strand, within A4249_RS10195 at 2044.392 kb on - strand, within A4249_RS10195 at 2044.392 kb on - strand, within A4249_RS10195 at 2044.392 kb on - strand, within A4249_RS10195 at 2044.392 kb on - strand, within A4249_RS10195 at 2044.680 kb on - strand, within A4249_RS10195 at 2044.717 kb on + strand at 2044.717 kb on + strand at 2044.717 kb on + strand at 2044.718 kb on - strand at 2044.771 kb on + strand at 2044.782 kb on - strand at 2044.902 kb on - strand, within A4249_RS10200 at 2044.988 kb on + strand, within A4249_RS10200 at 2044.988 kb on + strand, within A4249_RS10200 at 2044.988 kb on + strand, within A4249_RS10200 at 2044.988 kb on + strand, within A4249_RS10200 at 2044.989 kb on - strand, within A4249_RS10200 at 2044.989 kb on - strand, within A4249_RS10200 at 2044.989 kb on - strand, within A4249_RS10200 at 2044.989 kb on - strand, within A4249_RS10200 at 2044.989 kb on - strand, within A4249_RS10200 at 2045.065 kb on + strand, within A4249_RS10200 at 2045.065 kb on + strand, within A4249_RS10200 at 2045.065 kb on + strand, within A4249_RS10200 at 2045.066 kb on - strand, within A4249_RS10200 at 2045.236 kb on + strand at 2045.237 kb on - strand at 2045.237 kb on - strand at 2045.258 kb on + strand at 2045.258 kb on + strand at 2045.259 kb on - strand at 2045.259 kb on - strand at 2045.442 kb on - strand, within A4249_RS10205 at 2045.442 kb on - strand, within A4249_RS10205 at 2045.442 kb on - strand, within A4249_RS10205 at 2045.486 kb on + strand, within A4249_RS10205 at 2045.486 kb on + strand, within A4249_RS10205 at 2045.486 kb on + strand, within A4249_RS10205 at 2045.486 kb on + strand, within A4249_RS10205 at 2045.486 kb on + strand, within A4249_RS10205 at 2045.486 kb on + strand, within A4249_RS10205 at 2045.486 kb on + strand, within A4249_RS10205 at 2045.486 kb on + strand, within A4249_RS10205 at 2045.486 kb on + strand, within A4249_RS10205 at 2045.487 kb on - strand, within A4249_RS10205 at 2045.487 kb on - strand, within A4249_RS10205 at 2045.487 kb on - strand, within A4249_RS10205 at 2045.487 kb on - strand, within A4249_RS10205 at 2045.487 kb on - strand, within A4249_RS10205 at 2045.487 kb on - strand, within A4249_RS10205 at 2045.487 kb on - strand, within A4249_RS10205 at 2045.501 kb on + strand, within A4249_RS10205 at 2045.501 kb on + strand, within A4249_RS10205 at 2045.502 kb on - strand, within A4249_RS10205 at 2045.502 kb on - strand, within A4249_RS10205 at 2045.637 kb on - strand at 2045.718 kb on + strand at 2045.719 kb on - strand at 2045.719 kb on - strand at 2045.719 kb on - strand at 2046.019 kb on + strand, within A4249_RS10210 at 2046.020 kb on - strand, within A4249_RS10210 at 2046.020 kb on - strand, within A4249_RS10210 at 2046.020 kb on - strand, within A4249_RS10210 at 2046.064 kb on + strand, within A4249_RS10210 at 2046.064 kb on + strand, within A4249_RS10210 at 2046.065 kb on - strand, within A4249_RS10210 at 2046.065 kb on - strand, within A4249_RS10210
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,043,973 + A4249_RS10190 0.76 +0.1 2,043,973 + A4249_RS10190 0.76 -0.6 2,043,974 - A4249_RS10190 0.76 -0.1 2,043,974 - A4249_RS10190 0.76 -0.5 2,043,974 - A4249_RS10190 0.76 -0.3 2,044,281 + A4249_RS10195 0.10 -0.1 2,044,282 - A4249_RS10195 0.11 -0.6 2,044,282 - A4249_RS10195 0.11 +0.4 2,044,282 - A4249_RS10195 0.11 -0.6 2,044,391 + A4249_RS10195 0.31 +0.3 2,044,391 + A4249_RS10195 0.31 +0.4 2,044,391 + A4249_RS10195 0.31 +1.1 2,044,391 + A4249_RS10195 0.31 +0.2 2,044,392 - A4249_RS10195 0.31 -0.4 2,044,392 - A4249_RS10195 0.31 -0.3 2,044,392 - A4249_RS10195 0.31 -0.2 2,044,392 - A4249_RS10195 0.31 -0.1 2,044,680 - A4249_RS10195 0.85 -0.5 2,044,717 + -0.8 2,044,717 + +0.1 2,044,717 + +0.2 2,044,718 - -1.0 2,044,771 + +0.7 2,044,782 - -0.8 2,044,902 - A4249_RS10200 0.25 -0.8 2,044,988 + A4249_RS10200 0.44 +0.1 2,044,988 + A4249_RS10200 0.44 +0.5 2,044,988 + A4249_RS10200 0.44 +0.8 2,044,988 + A4249_RS10200 0.44 -0.6 2,044,989 - A4249_RS10200 0.44 +0.5 2,044,989 - A4249_RS10200 0.44 +1.0 2,044,989 - A4249_RS10200 0.44 +0.2 2,044,989 - A4249_RS10200 0.44 -1.3 2,044,989 - A4249_RS10200 0.44 +0.3 2,045,065 + A4249_RS10200 0.61 -0.8 2,045,065 + A4249_RS10200 0.61 +0.0 2,045,065 + A4249_RS10200 0.61 +0.7 2,045,066 - A4249_RS10200 0.61 -0.2 2,045,236 + -0.3 2,045,237 - +0.4 2,045,237 - +0.0 2,045,258 + +0.0 2,045,258 + +0.2 2,045,259 - -0.3 2,045,259 - -0.7 2,045,442 - A4249_RS10205 0.46 +0.0 2,045,442 - A4249_RS10205 0.46 -0.9 2,045,442 - A4249_RS10205 0.46 -0.2 2,045,486 + A4249_RS10205 0.59 +1.0 2,045,486 + A4249_RS10205 0.59 -1.2 2,045,486 + A4249_RS10205 0.59 -0.1 2,045,486 + A4249_RS10205 0.59 +0.5 2,045,486 + A4249_RS10205 0.59 -0.2 2,045,486 + A4249_RS10205 0.59 -1.2 2,045,486 + A4249_RS10205 0.59 -0.5 2,045,486 + A4249_RS10205 0.59 +0.0 2,045,486 + A4249_RS10205 0.59 -1.8 2,045,487 - A4249_RS10205 0.59 +0.1 2,045,487 - A4249_RS10205 0.59 -0.0 2,045,487 - A4249_RS10205 0.59 +0.4 2,045,487 - A4249_RS10205 0.59 -0.5 2,045,487 - A4249_RS10205 0.59 -1.0 2,045,487 - A4249_RS10205 0.59 -0.5 2,045,487 - A4249_RS10205 0.59 -0.3 2,045,501 + A4249_RS10205 0.63 +0.1 2,045,501 + A4249_RS10205 0.63 -0.4 2,045,502 - A4249_RS10205 0.63 +0.8 2,045,502 - A4249_RS10205 0.63 -0.4 2,045,637 - -1.0 2,045,718 + -0.3 2,045,719 - -0.4 2,045,719 - -0.7 2,045,719 - -0.7 2,046,019 + A4249_RS10210 0.12 +0.4 2,046,020 - A4249_RS10210 0.12 -1.0 2,046,020 - A4249_RS10210 0.12 -0.4 2,046,020 - A4249_RS10210 0.12 -0.1 2,046,064 + A4249_RS10210 0.15 -0.5 2,046,064 + A4249_RS10210 0.15 +0.0 2,046,065 - A4249_RS10210 0.15 -0.8 2,046,065 - A4249_RS10210 0.15 -0.0
Or see this region's nucleotide sequence