Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10080 and A4249_RS10085 are separated by 46 nucleotides A4249_RS10085 and A4249_RS10090 are separated by 90 nucleotides
A4249_RS10080: A4249_RS10080 - phosphoserine transaminase, at 2,024,495 to 2,025,655
_RS10080
A4249_RS10085: A4249_RS10085 - DnaJ C-terminal domain-containing protein, at 2,025,702 to 2,026,628
_RS10085
A4249_RS10090: A4249_RS10090 - glycoside hydrolase/phage tail family protein, at 2,026,719 to 2,030,417
_RS10090
Position (kb)
2025
2026
2027 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2025.716 kb on + strand at 2025.716 kb on + strand at 2025.716 kb on + strand at 2025.716 kb on + strand at 2025.716 kb on + strand at 2025.716 kb on + strand at 2025.717 kb on - strand at 2025.717 kb on - strand at 2025.717 kb on - strand at 2025.717 kb on - strand at 2025.717 kb on - strand at 2025.717 kb on - strand at 2025.717 kb on - strand at 2025.718 kb on + strand at 2025.719 kb on - strand at 2025.994 kb on + strand, within A4249_RS10085 at 2025.994 kb on + strand, within A4249_RS10085 at 2025.994 kb on + strand, within A4249_RS10085 at 2025.994 kb on + strand, within A4249_RS10085 at 2025.994 kb on + strand, within A4249_RS10085 at 2025.994 kb on + strand, within A4249_RS10085 at 2025.994 kb on + strand, within A4249_RS10085 at 2025.994 kb on + strand, within A4249_RS10085 at 2025.995 kb on - strand, within A4249_RS10085 at 2025.995 kb on - strand, within A4249_RS10085 at 2025.995 kb on - strand, within A4249_RS10085 at 2025.995 kb on - strand, within A4249_RS10085 at 2025.995 kb on - strand, within A4249_RS10085 at 2025.995 kb on - strand, within A4249_RS10085 at 2025.995 kb on - strand, within A4249_RS10085 at 2026.396 kb on + strand, within A4249_RS10085 at 2026.435 kb on + strand, within A4249_RS10085 at 2026.435 kb on + strand, within A4249_RS10085 at 2026.559 kb on - strand at 2026.559 kb on - strand at 2026.612 kb on + strand at 2026.612 kb on + strand at 2026.613 kb on - strand at 2026.613 kb on - strand at 2026.613 kb on - strand at 2026.613 kb on - strand at 2026.672 kb on + strand at 2026.672 kb on + strand at 2026.673 kb on - strand at 2026.673 kb on - strand at 2026.673 kb on - strand at 2026.673 kb on - strand at 2026.673 kb on - strand at 2026.712 kb on + strand at 2026.712 kb on + strand at 2026.713 kb on - strand at 2026.713 kb on - strand at 2026.713 kb on - strand at 2026.713 kb on - strand at 2026.713 kb on - strand at 2026.743 kb on + strand at 2026.744 kb on - strand at 2026.744 kb on - strand at 2026.744 kb on - strand at 2026.744 kb on - strand at 2026.744 kb on - strand at 2026.744 kb on - strand at 2026.744 kb on - strand at 2026.847 kb on + strand at 2026.847 kb on + strand at 2026.847 kb on + strand at 2026.847 kb on + strand at 2026.848 kb on - strand at 2026.848 kb on - strand at 2026.848 kb on - strand at 2026.852 kb on + strand at 2026.852 kb on + strand at 2026.852 kb on + strand at 2026.852 kb on + strand at 2026.852 kb on + strand at 2026.852 kb on + strand at 2026.852 kb on + strand at 2026.852 kb on + strand at 2026.853 kb on - strand at 2026.853 kb on - strand at 2026.853 kb on - strand at 2026.853 kb on - strand at 2026.853 kb on - strand at 2026.853 kb on - strand at 2026.853 kb on - strand at 2026.853 kb on - strand at 2026.853 kb on - strand at 2026.853 kb on - strand at 2026.931 kb on + strand at 2026.932 kb on - strand at 2026.932 kb on - strand at 2026.932 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,025,716 + +0.7 2,025,716 + +1.3 2,025,716 + -0.0 2,025,716 + -0.2 2,025,716 + +0.4 2,025,716 + +0.4 2,025,717 - -0.3 2,025,717 - -0.2 2,025,717 - -0.2 2,025,717 - +0.1 2,025,717 - +0.0 2,025,717 - -0.5 2,025,717 - +0.0 2,025,718 + +0.1 2,025,719 - -0.0 2,025,994 + A4249_RS10085 0.31 +2.1 2,025,994 + A4249_RS10085 0.31 -0.1 2,025,994 + A4249_RS10085 0.31 +0.2 2,025,994 + A4249_RS10085 0.31 -1.6 2,025,994 + A4249_RS10085 0.31 -1.1 2,025,994 + A4249_RS10085 0.31 -0.2 2,025,994 + A4249_RS10085 0.31 +2.1 2,025,994 + A4249_RS10085 0.31 -0.1 2,025,995 - A4249_RS10085 0.32 +0.1 2,025,995 - A4249_RS10085 0.32 -0.6 2,025,995 - A4249_RS10085 0.32 -0.6 2,025,995 - A4249_RS10085 0.32 +0.2 2,025,995 - A4249_RS10085 0.32 +0.3 2,025,995 - A4249_RS10085 0.32 +0.4 2,025,995 - A4249_RS10085 0.32 -0.4 2,026,396 + A4249_RS10085 0.75 -0.1 2,026,435 + A4249_RS10085 0.79 +0.0 2,026,435 + A4249_RS10085 0.79 +0.0 2,026,559 - +0.1 2,026,559 - +0.0 2,026,612 + +1.1 2,026,612 + +1.7 2,026,613 - -0.3 2,026,613 - -0.0 2,026,613 - -0.1 2,026,613 - -1.0 2,026,672 + +1.1 2,026,672 + -0.1 2,026,673 - -0.8 2,026,673 - -0.1 2,026,673 - +0.1 2,026,673 - -1.2 2,026,673 - -0.5 2,026,712 + +0.2 2,026,712 + -0.7 2,026,713 - -0.4 2,026,713 - -0.7 2,026,713 - +0.6 2,026,713 - +0.4 2,026,713 - -0.4 2,026,743 + -1.1 2,026,744 - +0.1 2,026,744 - -0.8 2,026,744 - +0.4 2,026,744 - +0.2 2,026,744 - -1.5 2,026,744 - -0.2 2,026,744 - +0.4 2,026,847 + -0.9 2,026,847 + +0.4 2,026,847 + -0.2 2,026,847 + -0.7 2,026,848 - +1.1 2,026,848 - -0.5 2,026,848 - +0.4 2,026,852 + +1.0 2,026,852 + -0.8 2,026,852 + +0.8 2,026,852 + -0.2 2,026,852 + +0.2 2,026,852 + +0.7 2,026,852 + -0.1 2,026,852 + -2.0 2,026,853 - -0.9 2,026,853 - +0.3 2,026,853 - -0.1 2,026,853 - +1.0 2,026,853 - +0.2 2,026,853 - -0.2 2,026,853 - +0.9 2,026,853 - -1.0 2,026,853 - +0.0 2,026,853 - -0.5 2,026,931 + -0.1 2,026,932 - +0.2 2,026,932 - +0.1 2,026,932 - -0.5
Or see this region's nucleotide sequence