Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10080

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10075 and A4249_RS10080 are separated by 75 nucleotidesA4249_RS10080 and A4249_RS10085 are separated by 46 nucleotides A4249_RS10075: A4249_RS10075 - adenylosuccinate synthase, at 2,023,124 to 2,024,419 _RS10075 A4249_RS10080: A4249_RS10080 - phosphoserine transaminase, at 2,024,495 to 2,025,655 _RS10080 A4249_RS10085: A4249_RS10085 - DnaJ C-terminal domain-containing protein, at 2,025,702 to 2,026,628 _RS10085 Position (kb) 2024 2025 2026Strain fitness (log2 ratio) -1 0 1 2at 2024.496 kb on + strandat 2024.497 kb on - strandat 2024.497 kb on - strandat 2025.716 kb on + strandat 2025.716 kb on + strandat 2025.716 kb on + strandat 2025.716 kb on + strandat 2025.716 kb on + strandat 2025.716 kb on + strandat 2025.717 kb on - strandat 2025.717 kb on - strandat 2025.717 kb on - strandat 2025.717 kb on - strandat 2025.717 kb on - strandat 2025.717 kb on - strandat 2025.717 kb on - strandat 2025.718 kb on + strandat 2025.719 kb on - strandat 2025.994 kb on + strand, within A4249_RS10085at 2025.994 kb on + strand, within A4249_RS10085at 2025.994 kb on + strand, within A4249_RS10085at 2025.994 kb on + strand, within A4249_RS10085at 2025.994 kb on + strand, within A4249_RS10085at 2025.994 kb on + strand, within A4249_RS10085at 2025.994 kb on + strand, within A4249_RS10085at 2025.994 kb on + strand, within A4249_RS10085at 2025.995 kb on - strand, within A4249_RS10085at 2025.995 kb on - strand, within A4249_RS10085at 2025.995 kb on - strand, within A4249_RS10085at 2025.995 kb on - strand, within A4249_RS10085at 2025.995 kb on - strand, within A4249_RS10085at 2025.995 kb on - strand, within A4249_RS10085at 2025.995 kb on - strand, within A4249_RS10085at 2026.396 kb on + strand, within A4249_RS10085at 2026.435 kb on + strand, within A4249_RS10085at 2026.435 kb on + strand, within A4249_RS10085at 2026.559 kb on - strandat 2026.559 kb on - strandat 2026.612 kb on + strandat 2026.612 kb on + strandat 2026.613 kb on - strandat 2026.613 kb on - strandat 2026.613 kb on - strandat 2026.613 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,024,496 + +0.7
2,024,497 - -0.8
2,024,497 - +0.2
2,025,716 + +0.7
2,025,716 + +1.3
2,025,716 + -0.0
2,025,716 + -0.2
2,025,716 + +0.4
2,025,716 + +0.4
2,025,717 - -0.3
2,025,717 - -0.2
2,025,717 - -0.2
2,025,717 - +0.1
2,025,717 - +0.0
2,025,717 - -0.5
2,025,717 - +0.0
2,025,718 + +0.1
2,025,719 - -0.0
2,025,994 + A4249_RS10085 0.31 +2.1
2,025,994 + A4249_RS10085 0.31 -0.1
2,025,994 + A4249_RS10085 0.31 +0.2
2,025,994 + A4249_RS10085 0.31 -1.6
2,025,994 + A4249_RS10085 0.31 -1.1
2,025,994 + A4249_RS10085 0.31 -0.2
2,025,994 + A4249_RS10085 0.31 +2.1
2,025,994 + A4249_RS10085 0.31 -0.1
2,025,995 - A4249_RS10085 0.32 +0.1
2,025,995 - A4249_RS10085 0.32 -0.6
2,025,995 - A4249_RS10085 0.32 -0.6
2,025,995 - A4249_RS10085 0.32 +0.2
2,025,995 - A4249_RS10085 0.32 +0.3
2,025,995 - A4249_RS10085 0.32 +0.4
2,025,995 - A4249_RS10085 0.32 -0.4
2,026,396 + A4249_RS10085 0.75 -0.1
2,026,435 + A4249_RS10085 0.79 +0.0
2,026,435 + A4249_RS10085 0.79 +0.0
2,026,559 - +0.1
2,026,559 - +0.0
2,026,612 + +1.1
2,026,612 + +1.7
2,026,613 - -0.3
2,026,613 - -0.0
2,026,613 - -0.1
2,026,613 - -1.0

Or see this region's nucleotide sequence