Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10060 and A4249_RS10065 are separated by 230 nucleotides A4249_RS10065 and A4249_RS10070 are separated by 47 nucleotides A4249_RS10070 and A4249_RS10075 are separated by 107 nucleotides
A4249_RS10060: A4249_RS10060 - RluA family pseudouridine synthase, at 2,020,019 to 2,021,038
_RS10060
A4249_RS10065: A4249_RS10065 - RNA polymerase sigma factor RpoH, at 2,021,269 to 2,022,156
_RS10065
A4249_RS10070: A4249_RS10070 - response regulator, at 2,022,204 to 2,023,016
_RS10070
A4249_RS10075: A4249_RS10075 - adenylosuccinate synthase, at 2,023,124 to 2,024,419
_RS10075
Position (kb)
2021
2022
2023 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2020.333 kb on + strand, within A4249_RS10060 at 2020.334 kb on - strand, within A4249_RS10060 at 2020.334 kb on - strand, within A4249_RS10060 at 2020.577 kb on + strand, within A4249_RS10060 at 2020.577 kb on + strand, within A4249_RS10060 at 2020.577 kb on + strand, within A4249_RS10060 at 2020.577 kb on + strand, within A4249_RS10060 at 2020.577 kb on + strand, within A4249_RS10060 at 2020.577 kb on + strand, within A4249_RS10060 at 2020.577 kb on + strand, within A4249_RS10060 at 2020.577 kb on + strand, within A4249_RS10060 at 2020.577 kb on + strand, within A4249_RS10060 at 2020.577 kb on + strand, within A4249_RS10060 at 2020.577 kb on + strand, within A4249_RS10060 at 2020.577 kb on + strand, within A4249_RS10060 at 2020.578 kb on - strand, within A4249_RS10060 at 2020.578 kb on - strand, within A4249_RS10060 at 2020.578 kb on - strand, within A4249_RS10060 at 2020.578 kb on - strand, within A4249_RS10060 at 2020.578 kb on - strand, within A4249_RS10060 at 2020.578 kb on - strand, within A4249_RS10060 at 2020.578 kb on - strand, within A4249_RS10060 at 2020.578 kb on - strand, within A4249_RS10060 at 2020.578 kb on - strand, within A4249_RS10060 at 2020.706 kb on + strand, within A4249_RS10060 at 2020.706 kb on + strand, within A4249_RS10060 at 2020.706 kb on + strand, within A4249_RS10060 at 2020.706 kb on + strand, within A4249_RS10060 at 2020.706 kb on + strand, within A4249_RS10060 at 2020.707 kb on - strand, within A4249_RS10060 at 2020.707 kb on - strand, within A4249_RS10060 at 2020.707 kb on - strand, within A4249_RS10060 at 2020.707 kb on - strand, within A4249_RS10060 at 2020.856 kb on + strand, within A4249_RS10060 at 2020.856 kb on + strand, within A4249_RS10060 at 2020.857 kb on - strand, within A4249_RS10060 at 2020.857 kb on - strand, within A4249_RS10060 at 2020.997 kb on + strand at 2020.997 kb on + strand at 2021.052 kb on + strand at 2021.052 kb on + strand at 2021.053 kb on - strand at 2021.086 kb on - strand at 2021.087 kb on + strand at 2021.090 kb on - strand at 2021.090 kb on - strand at 2021.090 kb on - strand at 2021.090 kb on - strand at 2021.177 kb on + strand at 2021.177 kb on + strand at 2021.177 kb on + strand at 2021.178 kb on - strand at 2021.178 kb on - strand at 2021.178 kb on - strand at 2021.266 kb on + strand at 2021.268 kb on + strand at 2021.280 kb on + strand at 2021.280 kb on + strand at 2021.280 kb on + strand at 2022.159 kb on + strand at 2022.160 kb on - strand at 2022.199 kb on + strand at 2022.199 kb on + strand at 2022.199 kb on + strand at 2022.199 kb on + strand at 2022.199 kb on + strand at 2022.199 kb on + strand at 2022.199 kb on + strand at 2022.200 kb on - strand at 2022.200 kb on - strand at 2022.313 kb on + strand, within A4249_RS10070 at 2022.313 kb on + strand, within A4249_RS10070 at 2022.313 kb on + strand, within A4249_RS10070 at 2022.313 kb on + strand, within A4249_RS10070 at 2022.313 kb on + strand, within A4249_RS10070 at 2022.313 kb on + strand, within A4249_RS10070 at 2022.313 kb on + strand, within A4249_RS10070 at 2022.313 kb on + strand, within A4249_RS10070 at 2022.314 kb on - strand, within A4249_RS10070 at 2022.314 kb on - strand, within A4249_RS10070 at 2022.314 kb on - strand, within A4249_RS10070 at 2022.314 kb on - strand, within A4249_RS10070 at 2022.314 kb on - strand, within A4249_RS10070 at 2022.314 kb on - strand, within A4249_RS10070 at 2022.314 kb on - strand, within A4249_RS10070 at 2022.314 kb on - strand, within A4249_RS10070 at 2022.314 kb on - strand, within A4249_RS10070 at 2022.314 kb on - strand, within A4249_RS10070 at 2022.535 kb on + strand, within A4249_RS10070 at 2022.535 kb on + strand, within A4249_RS10070 at 2022.535 kb on + strand, within A4249_RS10070 at 2022.536 kb on - strand, within A4249_RS10070 at 2022.536 kb on - strand, within A4249_RS10070 at 2022.574 kb on + strand, within A4249_RS10070 at 2022.574 kb on + strand, within A4249_RS10070 at 2022.575 kb on - strand, within A4249_RS10070 at 2022.855 kb on + strand, within A4249_RS10070 at 2022.856 kb on - strand, within A4249_RS10070 at 2022.883 kb on + strand, within A4249_RS10070 at 2022.884 kb on - strand, within A4249_RS10070 at 2022.884 kb on - strand, within A4249_RS10070 at 2022.884 kb on - strand, within A4249_RS10070 at 2022.884 kb on - strand, within A4249_RS10070 at 2022.990 kb on + strand at 2022.990 kb on + strand at 2022.990 kb on + strand at 2022.991 kb on - strand at 2023.061 kb on + strand at 2023.062 kb on - strand at 2023.075 kb on + strand at 2023.075 kb on + strand at 2023.075 kb on + strand at 2023.076 kb on - strand at 2023.076 kb on - strand at 2023.076 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,020,333 + A4249_RS10060 0.31 -0.3 2,020,334 - A4249_RS10060 0.31 -1.6 2,020,334 - A4249_RS10060 0.31 +0.5 2,020,577 + A4249_RS10060 0.55 +0.8 2,020,577 + A4249_RS10060 0.55 -0.2 2,020,577 + A4249_RS10060 0.55 +0.2 2,020,577 + A4249_RS10060 0.55 -0.1 2,020,577 + A4249_RS10060 0.55 +0.6 2,020,577 + A4249_RS10060 0.55 -0.8 2,020,577 + A4249_RS10060 0.55 +0.6 2,020,577 + A4249_RS10060 0.55 +1.2 2,020,577 + A4249_RS10060 0.55 +0.2 2,020,577 + A4249_RS10060 0.55 +0.1 2,020,577 + A4249_RS10060 0.55 -1.0 2,020,577 + A4249_RS10060 0.55 +1.2 2,020,578 - A4249_RS10060 0.55 -1.5 2,020,578 - A4249_RS10060 0.55 +0.7 2,020,578 - A4249_RS10060 0.55 -0.5 2,020,578 - A4249_RS10060 0.55 +1.4 2,020,578 - A4249_RS10060 0.55 -1.2 2,020,578 - A4249_RS10060 0.55 +1.8 2,020,578 - A4249_RS10060 0.55 -1.2 2,020,578 - A4249_RS10060 0.55 +0.0 2,020,578 - A4249_RS10060 0.55 -0.4 2,020,706 + A4249_RS10060 0.67 +0.8 2,020,706 + A4249_RS10060 0.67 +1.3 2,020,706 + A4249_RS10060 0.67 +0.5 2,020,706 + A4249_RS10060 0.67 +0.7 2,020,706 + A4249_RS10060 0.67 -0.4 2,020,707 - A4249_RS10060 0.67 -0.6 2,020,707 - A4249_RS10060 0.67 +0.9 2,020,707 - A4249_RS10060 0.67 -0.9 2,020,707 - A4249_RS10060 0.67 +0.4 2,020,856 + A4249_RS10060 0.82 +0.7 2,020,856 + A4249_RS10060 0.82 -0.5 2,020,857 - A4249_RS10060 0.82 -0.3 2,020,857 - A4249_RS10060 0.82 -0.2 2,020,997 + -0.7 2,020,997 + -2.1 2,021,052 + -0.0 2,021,052 + +1.2 2,021,053 - -0.1 2,021,086 - -0.6 2,021,087 + -0.1 2,021,090 - +0.5 2,021,090 - +1.5 2,021,090 - -0.2 2,021,090 - +0.2 2,021,177 + +0.8 2,021,177 + +0.3 2,021,177 + -0.2 2,021,178 - +0.4 2,021,178 - -0.4 2,021,178 - -1.3 2,021,266 + +0.4 2,021,268 + +0.5 2,021,280 + -0.4 2,021,280 + +0.5 2,021,280 + +1.0 2,022,159 + +0.3 2,022,160 - +0.1 2,022,199 + -1.3 2,022,199 + -1.3 2,022,199 + -0.5 2,022,199 + +0.4 2,022,199 + -0.6 2,022,199 + -1.2 2,022,199 + +0.4 2,022,200 - -0.2 2,022,200 - -1.0 2,022,313 + A4249_RS10070 0.13 -0.1 2,022,313 + A4249_RS10070 0.13 +0.2 2,022,313 + A4249_RS10070 0.13 +0.4 2,022,313 + A4249_RS10070 0.13 -0.7 2,022,313 + A4249_RS10070 0.13 -0.3 2,022,313 + A4249_RS10070 0.13 -0.7 2,022,313 + A4249_RS10070 0.13 -0.2 2,022,313 + A4249_RS10070 0.13 -0.1 2,022,314 - A4249_RS10070 0.14 -1.2 2,022,314 - A4249_RS10070 0.14 -0.2 2,022,314 - A4249_RS10070 0.14 +1.3 2,022,314 - A4249_RS10070 0.14 +0.1 2,022,314 - A4249_RS10070 0.14 -0.7 2,022,314 - A4249_RS10070 0.14 +0.6 2,022,314 - A4249_RS10070 0.14 -0.6 2,022,314 - A4249_RS10070 0.14 -0.0 2,022,314 - A4249_RS10070 0.14 -0.0 2,022,314 - A4249_RS10070 0.14 -0.7 2,022,535 + A4249_RS10070 0.41 -0.9 2,022,535 + A4249_RS10070 0.41 -0.2 2,022,535 + A4249_RS10070 0.41 +0.4 2,022,536 - A4249_RS10070 0.41 -0.1 2,022,536 - A4249_RS10070 0.41 -0.5 2,022,574 + A4249_RS10070 0.46 -0.4 2,022,574 + A4249_RS10070 0.46 -0.1 2,022,575 - A4249_RS10070 0.46 +0.5 2,022,855 + A4249_RS10070 0.80 +1.7 2,022,856 - A4249_RS10070 0.80 -0.7 2,022,883 + A4249_RS10070 0.84 +0.2 2,022,884 - A4249_RS10070 0.84 -0.5 2,022,884 - A4249_RS10070 0.84 -0.5 2,022,884 - A4249_RS10070 0.84 -0.2 2,022,884 - A4249_RS10070 0.84 -0.3 2,022,990 + -0.3 2,022,990 + -0.1 2,022,990 + +0.9 2,022,991 - -0.1 2,023,061 + -0.9 2,023,062 - -0.5 2,023,075 + +0.1 2,023,075 + +0.3 2,023,075 + +0.3 2,023,076 - +0.2 2,023,076 - -0.0 2,023,076 - +0.8
Or see this region's nucleotide sequence