Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08890 and A4249_RS08895 overlap by 4 nucleotides A4249_RS08895 and A4249_RS08900 are separated by 50 nucleotides A4249_RS08900 and A4249_RS08905 are separated by 168 nucleotides A4249_RS08905 and A4249_RS08910 are separated by 67 nucleotides
A4249_RS08890: A4249_RS08890 - UbiX family flavin prenyltransferase, at 1,779,691 to 1,780,293
_RS08890
A4249_RS08895: A4249_RS08895 - TIGR02444 family protein, at 1,780,290 to 1,780,754
_RS08895
A4249_RS08900: A4249_RS08900 - DUF465 domain-containing protein, at 1,780,805 to 1,781,029
_RS08900
A4249_RS08905: A4249_RS08905 - M23 family metallopeptidase, at 1,781,198 to 1,781,839
_RS08905
A4249_RS08910: A4249_RS08910 - CocE/NonD family hydrolase, at 1,781,907 to 1,783,793
_RS08910
Position (kb)
1781
1782 Strain fitness (log2 ratio)
-2
-1
0
1 at 1780.321 kb on - strand at 1780.321 kb on - strand at 1780.321 kb on - strand at 1780.767 kb on + strand at 1780.767 kb on + strand at 1780.767 kb on + strand at 1780.768 kb on - strand at 1780.768 kb on - strand at 1780.768 kb on - strand at 1780.768 kb on - strand at 1780.769 kb on + strand at 1780.769 kb on + strand at 1780.770 kb on - strand at 1781.082 kb on + strand at 1781.112 kb on + strand at 1781.112 kb on + strand at 1781.113 kb on - strand at 1781.113 kb on - strand at 1781.174 kb on + strand at 1781.174 kb on + strand at 1781.175 kb on - strand at 1781.175 kb on - strand at 1781.175 kb on - strand at 1781.583 kb on - strand, within A4249_RS08905 at 1781.598 kb on - strand, within A4249_RS08905 at 1781.864 kb on - strand at 1781.864 kb on - strand at 1781.864 kb on - strand at 1781.875 kb on + strand at 1781.875 kb on + strand at 1781.875 kb on + strand at 1781.875 kb on + strand at 1781.875 kb on + strand at 1781.875 kb on + strand at 1781.876 kb on - strand at 1781.877 kb on - strand at 1781.979 kb on + strand at 1781.979 kb on + strand at 1781.980 kb on - strand at 1781.980 kb on - strand at 1781.980 kb on - strand at 1781.988 kb on + strand at 1781.989 kb on - strand at 1781.989 kb on - strand at 1782.090 kb on + strand at 1782.090 kb on + strand at 1782.144 kb on + strand, within A4249_RS08910 at 1782.144 kb on + strand, within A4249_RS08910 at 1782.144 kb on + strand, within A4249_RS08910 at 1782.144 kb on + strand, within A4249_RS08910 at 1782.144 kb on + strand, within A4249_RS08910 at 1782.144 kb on + strand, within A4249_RS08910 at 1782.144 kb on + strand, within A4249_RS08910 at 1782.144 kb on + strand, within A4249_RS08910 at 1782.145 kb on - strand, within A4249_RS08910 at 1782.147 kb on - strand, within A4249_RS08910 at 1782.159 kb on + strand, within A4249_RS08910 at 1782.159 kb on + strand, within A4249_RS08910 at 1782.160 kb on - strand, within A4249_RS08910 at 1782.160 kb on - strand, within A4249_RS08910 at 1782.160 kb on - strand, within A4249_RS08910 at 1782.207 kb on + strand, within A4249_RS08910 at 1782.207 kb on + strand, within A4249_RS08910 at 1782.207 kb on + strand, within A4249_RS08910 at 1782.208 kb on - strand, within A4249_RS08910 at 1782.208 kb on - strand, within A4249_RS08910 at 1782.208 kb on - strand, within A4249_RS08910 at 1782.240 kb on + strand, within A4249_RS08910 at 1782.240 kb on + strand, within A4249_RS08910 at 1782.241 kb on - strand, within A4249_RS08910 at 1782.241 kb on - strand, within A4249_RS08910 at 1782.258 kb on + strand, within A4249_RS08910 at 1782.258 kb on + strand, within A4249_RS08910 at 1782.291 kb on + strand, within A4249_RS08910 at 1782.291 kb on + strand, within A4249_RS08910 at 1782.291 kb on + strand, within A4249_RS08910 at 1782.292 kb on - strand, within A4249_RS08910 at 1782.292 kb on - strand, within A4249_RS08910 at 1782.292 kb on - strand, within A4249_RS08910 at 1782.484 kb on - strand, within A4249_RS08910 at 1782.484 kb on - strand, within A4249_RS08910 at 1782.526 kb on - strand, within A4249_RS08910 at 1782.600 kb on + strand, within A4249_RS08910 at 1782.600 kb on + strand, within A4249_RS08910 at 1782.600 kb on + strand, within A4249_RS08910 at 1782.601 kb on - strand, within A4249_RS08910 at 1782.762 kb on + strand, within A4249_RS08910 at 1782.762 kb on + strand, within A4249_RS08910 at 1782.763 kb on - strand, within A4249_RS08910 at 1782.763 kb on - strand, within A4249_RS08910 at 1782.813 kb on + strand, within A4249_RS08910 at 1782.813 kb on + strand, within A4249_RS08910 at 1782.813 kb on + strand, within A4249_RS08910 at 1782.813 kb on + strand, within A4249_RS08910 at 1782.813 kb on + strand, within A4249_RS08910 at 1782.813 kb on + strand, within A4249_RS08910 at 1782.813 kb on + strand, within A4249_RS08910 at 1782.813 kb on + strand, within A4249_RS08910 at 1782.813 kb on + strand, within A4249_RS08910 at 1782.813 kb on + strand, within A4249_RS08910 at 1782.814 kb on - strand, within A4249_RS08910 at 1782.814 kb on - strand, within A4249_RS08910 at 1782.814 kb on - strand, within A4249_RS08910 at 1782.814 kb on - strand, within A4249_RS08910 at 1782.814 kb on - strand, within A4249_RS08910 at 1782.814 kb on - strand, within A4249_RS08910
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,780,321 - +1.3 1,780,321 - -0.3 1,780,321 - -1.2 1,780,767 + -0.2 1,780,767 + +0.5 1,780,767 + -1.6 1,780,768 - -0.2 1,780,768 - +0.1 1,780,768 - -0.4 1,780,768 - +0.3 1,780,769 + +0.4 1,780,769 + -0.1 1,780,770 - -0.3 1,781,082 + -0.2 1,781,112 + -0.1 1,781,112 + +0.4 1,781,113 - +0.0 1,781,113 - +0.1 1,781,174 + -0.7 1,781,174 + +0.5 1,781,175 - -0.9 1,781,175 - -1.9 1,781,175 - -0.5 1,781,583 - A4249_RS08905 0.60 -0.2 1,781,598 - A4249_RS08905 0.62 +0.5 1,781,864 - +0.2 1,781,864 - +0.1 1,781,864 - -1.1 1,781,875 + -0.4 1,781,875 + +0.0 1,781,875 + -0.6 1,781,875 + -0.5 1,781,875 + -1.5 1,781,875 + -0.4 1,781,876 - -0.2 1,781,877 - -0.8 1,781,979 + -0.1 1,781,979 + +0.6 1,781,980 - -0.0 1,781,980 - -0.3 1,781,980 - -0.1 1,781,988 + -0.1 1,781,989 - -0.3 1,781,989 - +0.7 1,782,090 + -0.4 1,782,090 + -0.5 1,782,144 + A4249_RS08910 0.13 -2.0 1,782,144 + A4249_RS08910 0.13 -0.2 1,782,144 + A4249_RS08910 0.13 -0.6 1,782,144 + A4249_RS08910 0.13 -0.3 1,782,144 + A4249_RS08910 0.13 -1.1 1,782,144 + A4249_RS08910 0.13 +0.3 1,782,144 + A4249_RS08910 0.13 +0.5 1,782,144 + A4249_RS08910 0.13 -0.1 1,782,145 - A4249_RS08910 0.13 -0.9 1,782,147 - A4249_RS08910 0.13 -0.6 1,782,159 + A4249_RS08910 0.13 +1.2 1,782,159 + A4249_RS08910 0.13 +0.8 1,782,160 - A4249_RS08910 0.13 +0.2 1,782,160 - A4249_RS08910 0.13 -0.5 1,782,160 - A4249_RS08910 0.13 +0.4 1,782,207 + A4249_RS08910 0.16 +0.1 1,782,207 + A4249_RS08910 0.16 -0.3 1,782,207 + A4249_RS08910 0.16 +0.5 1,782,208 - A4249_RS08910 0.16 +0.1 1,782,208 - A4249_RS08910 0.16 +0.3 1,782,208 - A4249_RS08910 0.16 +0.3 1,782,240 + A4249_RS08910 0.18 -0.1 1,782,240 + A4249_RS08910 0.18 +0.2 1,782,241 - A4249_RS08910 0.18 +1.7 1,782,241 - A4249_RS08910 0.18 +0.6 1,782,258 + A4249_RS08910 0.19 +0.0 1,782,258 + A4249_RS08910 0.19 +0.3 1,782,291 + A4249_RS08910 0.20 -0.2 1,782,291 + A4249_RS08910 0.20 +0.7 1,782,291 + A4249_RS08910 0.20 -0.1 1,782,292 - A4249_RS08910 0.20 +0.2 1,782,292 - A4249_RS08910 0.20 -0.7 1,782,292 - A4249_RS08910 0.20 +0.2 1,782,484 - A4249_RS08910 0.31 -0.2 1,782,484 - A4249_RS08910 0.31 -0.5 1,782,526 - A4249_RS08910 0.33 -1.4 1,782,600 + A4249_RS08910 0.37 -0.1 1,782,600 + A4249_RS08910 0.37 -1.0 1,782,600 + A4249_RS08910 0.37 +0.1 1,782,601 - A4249_RS08910 0.37 -0.3 1,782,762 + A4249_RS08910 0.45 -1.0 1,782,762 + A4249_RS08910 0.45 -0.4 1,782,763 - A4249_RS08910 0.45 -0.5 1,782,763 - A4249_RS08910 0.45 +0.1 1,782,813 + A4249_RS08910 0.48 -0.6 1,782,813 + A4249_RS08910 0.48 +0.1 1,782,813 + A4249_RS08910 0.48 -1.3 1,782,813 + A4249_RS08910 0.48 -0.7 1,782,813 + A4249_RS08910 0.48 +0.0 1,782,813 + A4249_RS08910 0.48 +1.0 1,782,813 + A4249_RS08910 0.48 -0.8 1,782,813 + A4249_RS08910 0.48 +0.7 1,782,813 + A4249_RS08910 0.48 -0.6 1,782,813 + A4249_RS08910 0.48 -0.1 1,782,814 - A4249_RS08910 0.48 +0.5 1,782,814 - A4249_RS08910 0.48 +0.1 1,782,814 - A4249_RS08910 0.48 +0.2 1,782,814 - A4249_RS08910 0.48 +0.9 1,782,814 - A4249_RS08910 0.48 -0.5 1,782,814 - A4249_RS08910 0.48 -0.1
Or see this region's nucleotide sequence