Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08805 and A4249_RS08810 are separated by 62 nucleotides A4249_RS08810 and A4249_RS08815 are separated by 131 nucleotides A4249_RS08815 and A4249_RS08820 are separated by 141 nucleotides A4249_RS08820 and A4249_RS08825 are separated by 69 nucleotides
A4249_RS08805: A4249_RS08805 - HAMP domain-containing sensor histidine kinase, at 1,764,841 to 1,766,532
_RS08805
A4249_RS08810: A4249_RS08810 - thiamine phosphate synthase, at 1,766,595 to 1,767,248
_RS08810
A4249_RS08815: A4249_RS08815 - (2Fe-2S)-binding protein, at 1,767,380 to 1,767,565
_RS08815
A4249_RS08820: A4249_RS08820 - bacterioferritin, at 1,767,707 to 1,768,207
_RS08820
A4249_RS08825: A4249_RS08825 - tryptophan-rich sensory protein, at 1,768,277 to 1,768,837
_RS08825
Position (kb)
1767
1768 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1766.563 kb on + strand at 1766.563 kb on + strand at 1766.563 kb on + strand at 1766.580 kb on + strand at 1766.580 kb on + strand at 1766.580 kb on + strand at 1766.580 kb on + strand at 1766.580 kb on + strand at 1766.580 kb on + strand at 1766.581 kb on - strand at 1766.581 kb on - strand at 1766.581 kb on - strand at 1766.581 kb on - strand at 1766.581 kb on - strand at 1766.581 kb on - strand at 1766.581 kb on - strand at 1766.581 kb on - strand at 1766.584 kb on - strand at 1766.584 kb on - strand at 1767.289 kb on + strand at 1767.289 kb on + strand at 1767.289 kb on + strand at 1767.290 kb on - strand at 1767.339 kb on + strand at 1767.340 kb on - strand at 1767.340 kb on - strand at 1767.341 kb on + strand at 1767.342 kb on - strand at 1767.383 kb on + strand at 1767.383 kb on + strand at 1767.383 kb on + strand at 1767.384 kb on - strand at 1767.384 kb on - strand at 1767.384 kb on - strand at 1767.384 kb on - strand at 1767.384 kb on - strand at 1767.397 kb on + strand at 1767.397 kb on + strand at 1767.398 kb on - strand at 1767.563 kb on + strand at 1767.563 kb on + strand at 1767.564 kb on - strand at 1767.564 kb on - strand at 1767.643 kb on + strand at 1767.644 kb on - strand at 1767.644 kb on - strand at 1767.644 kb on - strand at 1767.651 kb on + strand at 1767.780 kb on - strand, within A4249_RS08820 at 1767.780 kb on - strand, within A4249_RS08820 at 1767.839 kb on + strand, within A4249_RS08820 at 1767.839 kb on + strand, within A4249_RS08820 at 1767.839 kb on + strand, within A4249_RS08820 at 1767.839 kb on + strand, within A4249_RS08820 at 1767.839 kb on + strand, within A4249_RS08820 at 1767.839 kb on + strand, within A4249_RS08820 at 1767.839 kb on + strand, within A4249_RS08820 at 1767.840 kb on - strand, within A4249_RS08820 at 1767.840 kb on - strand, within A4249_RS08820 at 1768.046 kb on + strand, within A4249_RS08820 at 1768.046 kb on + strand, within A4249_RS08820 at 1768.047 kb on - strand, within A4249_RS08820 at 1768.047 kb on - strand, within A4249_RS08820 at 1768.151 kb on + strand, within A4249_RS08820 at 1768.152 kb on - strand, within A4249_RS08820 at 1768.152 kb on - strand, within A4249_RS08820 at 1768.152 kb on - strand, within A4249_RS08820 at 1768.205 kb on + strand at 1768.205 kb on + strand at 1768.205 kb on + strand at 1768.206 kb on - strand at 1768.206 kb on - strand at 1768.206 kb on - strand at 1768.206 kb on - strand at 1768.206 kb on - strand at 1768.206 kb on - strand at 1768.474 kb on + strand, within A4249_RS08825 at 1768.474 kb on + strand, within A4249_RS08825 at 1768.474 kb on + strand, within A4249_RS08825 at 1768.474 kb on + strand, within A4249_RS08825 at 1768.475 kb on - strand, within A4249_RS08825 at 1768.549 kb on - strand, within A4249_RS08825
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,766,563 + -0.3 1,766,563 + -0.3 1,766,563 + -0.0 1,766,580 + -0.2 1,766,580 + +0.6 1,766,580 + -0.4 1,766,580 + -0.2 1,766,580 + -1.5 1,766,580 + -0.7 1,766,581 - -0.6 1,766,581 - +0.1 1,766,581 - -0.5 1,766,581 - -0.6 1,766,581 - +0.1 1,766,581 - +0.2 1,766,581 - -0.8 1,766,581 - -0.2 1,766,584 - +0.9 1,766,584 - -1.0 1,767,289 + +0.1 1,767,289 + -0.0 1,767,289 + +0.3 1,767,290 - +0.4 1,767,339 + -0.9 1,767,340 - -0.4 1,767,340 - -0.2 1,767,341 + -0.8 1,767,342 - -0.4 1,767,383 + -3.1 1,767,383 + -1.0 1,767,383 + +0.4 1,767,384 - +0.0 1,767,384 - -2.1 1,767,384 - +0.4 1,767,384 - -0.3 1,767,384 - +0.2 1,767,397 + +0.7 1,767,397 + +0.2 1,767,398 - -0.5 1,767,563 + -0.8 1,767,563 + -0.4 1,767,564 - -0.5 1,767,564 - +0.5 1,767,643 + -0.5 1,767,644 - -0.2 1,767,644 - +0.7 1,767,644 - +0.8 1,767,651 + -1.3 1,767,780 - A4249_RS08820 0.15 -0.4 1,767,780 - A4249_RS08820 0.15 -0.0 1,767,839 + A4249_RS08820 0.26 -0.5 1,767,839 + A4249_RS08820 0.26 -0.5 1,767,839 + A4249_RS08820 0.26 -1.4 1,767,839 + A4249_RS08820 0.26 -1.1 1,767,839 + A4249_RS08820 0.26 +0.9 1,767,839 + A4249_RS08820 0.26 +0.0 1,767,839 + A4249_RS08820 0.26 +0.8 1,767,840 - A4249_RS08820 0.27 +0.3 1,767,840 - A4249_RS08820 0.27 +0.3 1,768,046 + A4249_RS08820 0.68 -0.8 1,768,046 + A4249_RS08820 0.68 +0.1 1,768,047 - A4249_RS08820 0.68 -1.1 1,768,047 - A4249_RS08820 0.68 +0.0 1,768,151 + A4249_RS08820 0.89 -0.3 1,768,152 - A4249_RS08820 0.89 -0.1 1,768,152 - A4249_RS08820 0.89 -1.9 1,768,152 - A4249_RS08820 0.89 -1.0 1,768,205 + -0.4 1,768,205 + -0.2 1,768,205 + +0.2 1,768,206 - +0.6 1,768,206 - +0.3 1,768,206 - +0.3 1,768,206 - +0.3 1,768,206 - +0.6 1,768,206 - +0.2 1,768,474 + A4249_RS08825 0.35 +0.1 1,768,474 + A4249_RS08825 0.35 -0.1 1,768,474 + A4249_RS08825 0.35 -0.8 1,768,474 + A4249_RS08825 0.35 +0.0 1,768,475 - A4249_RS08825 0.35 +0.1 1,768,549 - A4249_RS08825 0.48 -1.3
Or see this region's nucleotide sequence