Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS08325

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS08320 and A4249_RS08325 are separated by 118 nucleotidesA4249_RS08325 and A4249_RS08330 overlap by 4 nucleotidesA4249_RS08330 and A4249_RS08335 are separated by 1 nucleotides A4249_RS08320: A4249_RS08320 - cystathionine beta-synthase, at 1,669,635 to 1,671,035 _RS08320 A4249_RS08325: A4249_RS08325 - ribonuclease R, at 1,671,154 to 1,673,463 _RS08325 A4249_RS08330: A4249_RS08330 - NUDIX domain-containing protein, at 1,673,460 to 1,674,161 _RS08330 A4249_RS08335: A4249_RS08335 - DUF5990 family protein, at 1,674,163 to 1,674,576 _RS08335 Position (kb) 1671 1672 1673 1674Strain fitness (log2 ratio) -2 -1 0 1 2at 1670.266 kb on + strand, within A4249_RS08320at 1670.266 kb on + strand, within A4249_RS08320at 1670.266 kb on + strand, within A4249_RS08320at 1670.266 kb on + strand, within A4249_RS08320at 1670.267 kb on - strand, within A4249_RS08320at 1670.267 kb on - strand, within A4249_RS08320at 1670.267 kb on - strand, within A4249_RS08320at 1670.267 kb on - strand, within A4249_RS08320at 1670.267 kb on - strand, within A4249_RS08320at 1670.267 kb on - strand, within A4249_RS08320at 1670.335 kb on + strand, within A4249_RS08320at 1670.335 kb on + strand, within A4249_RS08320at 1670.336 kb on - strand, within A4249_RS08320at 1670.336 kb on - strand, within A4249_RS08320at 1670.336 kb on - strand, within A4249_RS08320at 1670.336 kb on - strand, within A4249_RS08320at 1670.336 kb on - strand, within A4249_RS08320at 1670.336 kb on - strand, within A4249_RS08320at 1670.584 kb on + strand, within A4249_RS08320at 1670.584 kb on + strand, within A4249_RS08320at 1670.584 kb on + strand, within A4249_RS08320at 1670.584 kb on + strand, within A4249_RS08320at 1670.585 kb on - strand, within A4249_RS08320at 1670.585 kb on - strand, within A4249_RS08320at 1670.585 kb on - strand, within A4249_RS08320at 1670.585 kb on - strand, within A4249_RS08320at 1670.585 kb on - strand, within A4249_RS08320at 1670.632 kb on + strand, within A4249_RS08320at 1670.632 kb on + strand, within A4249_RS08320at 1670.632 kb on + strand, within A4249_RS08320at 1670.632 kb on + strand, within A4249_RS08320at 1670.632 kb on + strand, within A4249_RS08320at 1670.632 kb on + strand, within A4249_RS08320at 1670.632 kb on + strand, within A4249_RS08320at 1670.633 kb on - strand, within A4249_RS08320at 1670.633 kb on - strand, within A4249_RS08320at 1670.633 kb on - strand, within A4249_RS08320at 1670.633 kb on - strand, within A4249_RS08320at 1670.633 kb on - strand, within A4249_RS08320at 1670.633 kb on - strand, within A4249_RS08320at 1670.633 kb on - strand, within A4249_RS08320at 1670.635 kb on + strand, within A4249_RS08320at 1670.635 kb on + strand, within A4249_RS08320at 1670.635 kb on + strand, within A4249_RS08320at 1670.635 kb on + strand, within A4249_RS08320at 1670.635 kb on + strand, within A4249_RS08320at 1670.635 kb on + strand, within A4249_RS08320at 1670.636 kb on - strand, within A4249_RS08320at 1670.636 kb on - strand, within A4249_RS08320at 1670.636 kb on - strand, within A4249_RS08320at 1670.750 kb on + strand, within A4249_RS08320at 1670.750 kb on + strand, within A4249_RS08320at 1670.750 kb on + strand, within A4249_RS08320at 1670.750 kb on + strand, within A4249_RS08320at 1670.750 kb on + strand, within A4249_RS08320at 1670.751 kb on - strand, within A4249_RS08320at 1670.751 kb on - strand, within A4249_RS08320at 1670.751 kb on - strand, within A4249_RS08320at 1670.751 kb on - strand, within A4249_RS08320at 1670.751 kb on - strand, within A4249_RS08320at 1670.751 kb on - strand, within A4249_RS08320at 1670.751 kb on - strand, within A4249_RS08320at 1670.751 kb on - strand, within A4249_RS08320at 1670.751 kb on - strand, within A4249_RS08320at 1670.751 kb on - strand, within A4249_RS08320at 1670.751 kb on - strand, within A4249_RS08320at 1670.751 kb on - strand, within A4249_RS08320at 1670.751 kb on - strand, within A4249_RS08320at 1670.751 kb on - strand, within A4249_RS08320at 1670.752 kb on + strand, within A4249_RS08320at 1670.752 kb on + strand, within A4249_RS08320at 1670.752 kb on + strand, within A4249_RS08320at 1670.753 kb on - strand, within A4249_RS08320at 1670.753 kb on - strand, within A4249_RS08320at 1670.753 kb on - strand, within A4249_RS08320at 1671.118 kb on + strandat 1671.119 kb on - strandat 1671.119 kb on - strandat 1671.142 kb on - strandat 1671.152 kb on + strandat 1671.152 kb on + strandat 1671.152 kb on + strandat 1671.152 kb on + strandat 1671.152 kb on + strandat 1671.153 kb on - strandat 1671.153 kb on - strandat 1671.153 kb on - strandat 1671.153 kb on - strandat 1671.153 kb on - strandat 1671.153 kb on - strandat 1671.153 kb on - strandat 1671.153 kb on - strandat 1671.153 kb on - strandat 1671.427 kb on + strand, within A4249_RS08325at 1671.427 kb on + strand, within A4249_RS08325at 1671.427 kb on + strand, within A4249_RS08325at 1671.427 kb on + strand, within A4249_RS08325at 1671.427 kb on + strand, within A4249_RS08325at 1671.427 kb on + strand, within A4249_RS08325at 1671.427 kb on + strand, within A4249_RS08325at 1671.427 kb on + strand, within A4249_RS08325at 1671.427 kb on + strand, within A4249_RS08325at 1671.428 kb on - strand, within A4249_RS08325at 1671.428 kb on - strand, within A4249_RS08325at 1671.428 kb on - strand, within A4249_RS08325at 1671.428 kb on - strand, within A4249_RS08325at 1671.428 kb on - strand, within A4249_RS08325at 1671.428 kb on - strand, within A4249_RS08325at 1671.428 kb on - strand, within A4249_RS08325at 1671.506 kb on + strand, within A4249_RS08325at 1671.507 kb on - strand, within A4249_RS08325at 1671.748 kb on + strand, within A4249_RS08325at 1671.748 kb on + strand, within A4249_RS08325at 1671.749 kb on - strand, within A4249_RS08325at 1671.980 kb on - strand, within A4249_RS08325at 1671.980 kb on - strand, within A4249_RS08325at 1672.055 kb on - strand, within A4249_RS08325at 1672.111 kb on + strand, within A4249_RS08325at 1672.111 kb on + strand, within A4249_RS08325at 1672.111 kb on + strand, within A4249_RS08325at 1672.111 kb on + strand, within A4249_RS08325at 1672.112 kb on - strand, within A4249_RS08325at 1672.245 kb on + strand, within A4249_RS08325at 1672.245 kb on + strand, within A4249_RS08325at 1672.245 kb on + strand, within A4249_RS08325at 1672.245 kb on + strand, within A4249_RS08325at 1672.245 kb on + strand, within A4249_RS08325at 1672.245 kb on + strand, within A4249_RS08325at 1672.245 kb on + strand, within A4249_RS08325at 1672.245 kb on + strand, within A4249_RS08325at 1672.245 kb on + strand, within A4249_RS08325at 1672.246 kb on - strand, within A4249_RS08325at 1672.246 kb on - strand, within A4249_RS08325at 1672.246 kb on - strand, within A4249_RS08325at 1672.288 kb on + strand, within A4249_RS08325at 1672.289 kb on - strand, within A4249_RS08325at 1672.289 kb on - strand, within A4249_RS08325at 1672.378 kb on + strand, within A4249_RS08325at 1672.379 kb on - strand, within A4249_RS08325at 1672.379 kb on - strand, within A4249_RS08325at 1672.585 kb on + strand, within A4249_RS08325at 1672.780 kb on + strand, within A4249_RS08325at 1672.781 kb on - strand, within A4249_RS08325at 1672.781 kb on - strand, within A4249_RS08325at 1672.855 kb on + strand, within A4249_RS08325at 1672.855 kb on + strand, within A4249_RS08325at 1673.014 kb on + strand, within A4249_RS08325at 1673.014 kb on + strand, within A4249_RS08325at 1673.014 kb on + strand, within A4249_RS08325at 1673.015 kb on - strand, within A4249_RS08325at 1673.015 kb on - strand, within A4249_RS08325at 1673.015 kb on - strand, within A4249_RS08325at 1673.015 kb on - strand, within A4249_RS08325at 1673.015 kb on - strand, within A4249_RS08325at 1673.016 kb on + strand, within A4249_RS08325at 1673.016 kb on + strand, within A4249_RS08325at 1673.017 kb on - strand, within A4249_RS08325at 1673.017 kb on - strand, within A4249_RS08325at 1673.017 kb on - strand, within A4249_RS08325at 1673.017 kb on - strand, within A4249_RS08325at 1673.026 kb on + strand, within A4249_RS08325at 1673.155 kb on + strand, within A4249_RS08325at 1673.155 kb on + strand, within A4249_RS08325at 1673.155 kb on + strand, within A4249_RS08325at 1673.839 kb on - strand, within A4249_RS08330at 1673.880 kb on + strand, within A4249_RS08330at 1673.880 kb on + strand, within A4249_RS08330at 1673.880 kb on + strand, within A4249_RS08330at 1673.880 kb on + strand, within A4249_RS08330at 1673.880 kb on + strand, within A4249_RS08330at 1673.881 kb on - strand, within A4249_RS08330at 1673.881 kb on - strand, within A4249_RS08330at 1673.881 kb on - strand, within A4249_RS08330at 1673.881 kb on - strand, within A4249_RS08330at 1673.897 kb on + strand, within A4249_RS08330at 1673.898 kb on - strand, within A4249_RS08330at 1673.898 kb on - strand, within A4249_RS08330at 1674.223 kb on + strand, within A4249_RS08335at 1674.223 kb on + strand, within A4249_RS08335at 1674.224 kb on - strand, within A4249_RS08335at 1674.224 kb on - strand, within A4249_RS08335at 1674.224 kb on - strand, within A4249_RS08335at 1674.224 kb on - strand, within A4249_RS08335at 1674.224 kb on - strand, within A4249_RS08335at 1674.373 kb on + strand, within A4249_RS08335at 1674.373 kb on + strand, within A4249_RS08335at 1674.373 kb on + strand, within A4249_RS08335at 1674.373 kb on + strand, within A4249_RS08335at 1674.373 kb on + strand, within A4249_RS08335at 1674.373 kb on + strand, within A4249_RS08335at 1674.373 kb on + strand, within A4249_RS08335at 1674.373 kb on + strand, within A4249_RS08335at 1674.373 kb on + strand, within A4249_RS08335at 1674.373 kb on + strand, within A4249_RS08335at 1674.373 kb on + strand, within A4249_RS08335at 1674.373 kb on + strand, within A4249_RS08335at 1674.373 kb on + strand, within A4249_RS08335at 1674.374 kb on - strand, within A4249_RS08335at 1674.374 kb on - strand, within A4249_RS08335at 1674.374 kb on - strand, within A4249_RS08335at 1674.447 kb on + strand, within A4249_RS08335at 1674.447 kb on + strand, within A4249_RS08335at 1674.447 kb on + strand, within A4249_RS08335at 1674.448 kb on - strand, within A4249_RS08335at 1674.448 kb on - strand, within A4249_RS08335at 1674.448 kb on - strand, within A4249_RS08335at 1674.448 kb on - strand, within A4249_RS08335

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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1,670,266 + A4249_RS08320 0.45 +0.8
1,670,266 + A4249_RS08320 0.45 -1.5
1,670,266 + A4249_RS08320 0.45 -0.0
1,670,266 + A4249_RS08320 0.45 +0.2
1,670,267 - A4249_RS08320 0.45 -1.5
1,670,267 - A4249_RS08320 0.45 +0.5
1,670,267 - A4249_RS08320 0.45 +1.5
1,670,267 - A4249_RS08320 0.45 +0.5
1,670,267 - A4249_RS08320 0.45 +0.8
1,670,267 - A4249_RS08320 0.45 +0.7
1,670,335 + A4249_RS08320 0.50 +0.2
1,670,335 + A4249_RS08320 0.50 -0.5
1,670,336 - A4249_RS08320 0.50 -0.2
1,670,336 - A4249_RS08320 0.50 -0.2
1,670,336 - A4249_RS08320 0.50 -0.6
1,670,336 - A4249_RS08320 0.50 +0.7
1,670,336 - A4249_RS08320 0.50 -0.1
1,670,336 - A4249_RS08320 0.50 -0.3
1,670,584 + A4249_RS08320 0.68 -0.2
1,670,584 + A4249_RS08320 0.68 +2.1
1,670,584 + A4249_RS08320 0.68 +1.0
1,670,584 + A4249_RS08320 0.68 +0.6
1,670,585 - A4249_RS08320 0.68 +0.5
1,670,585 - A4249_RS08320 0.68 -0.0
1,670,585 - A4249_RS08320 0.68 +0.8
1,670,585 - A4249_RS08320 0.68 -0.1
1,670,585 - A4249_RS08320 0.68 -0.1
1,670,632 + A4249_RS08320 0.71 +0.7
1,670,632 + A4249_RS08320 0.71 -1.4
1,670,632 + A4249_RS08320 0.71 +0.2
1,670,632 + A4249_RS08320 0.71 -0.5
1,670,632 + A4249_RS08320 0.71 -2.0
1,670,632 + A4249_RS08320 0.71 +0.5
1,670,632 + A4249_RS08320 0.71 +0.2
1,670,633 - A4249_RS08320 0.71 +0.0
1,670,633 - A4249_RS08320 0.71 -0.9
1,670,633 - A4249_RS08320 0.71 +0.4
1,670,633 - A4249_RS08320 0.71 +0.1
1,670,633 - A4249_RS08320 0.71 +1.0
1,670,633 - A4249_RS08320 0.71 +0.7
1,670,633 - A4249_RS08320 0.71 +0.3
1,670,635 + A4249_RS08320 0.71 +0.1
1,670,635 + A4249_RS08320 0.71 -0.4
1,670,635 + A4249_RS08320 0.71 -0.0
1,670,635 + A4249_RS08320 0.71 -0.2
1,670,635 + A4249_RS08320 0.71 -0.5
1,670,635 + A4249_RS08320 0.71 -0.5
1,670,636 - A4249_RS08320 0.71 -0.1
1,670,636 - A4249_RS08320 0.71 -0.3
1,670,636 - A4249_RS08320 0.71 -0.4
1,670,750 + A4249_RS08320 0.80 +0.9
1,670,750 + A4249_RS08320 0.80 +1.1
1,670,750 + A4249_RS08320 0.80 -0.2
1,670,750 + A4249_RS08320 0.80 -0.2
1,670,750 + A4249_RS08320 0.80 +0.2
1,670,751 - A4249_RS08320 0.80 +0.3
1,670,751 - A4249_RS08320 0.80 +0.7
1,670,751 - A4249_RS08320 0.80 +0.2
1,670,751 - A4249_RS08320 0.80 -0.5
1,670,751 - A4249_RS08320 0.80 -0.2
1,670,751 - A4249_RS08320 0.80 -0.3
1,670,751 - A4249_RS08320 0.80 +0.9
1,670,751 - A4249_RS08320 0.80 -0.2
1,670,751 - A4249_RS08320 0.80 +0.5
1,670,751 - A4249_RS08320 0.80 +0.1
1,670,751 - A4249_RS08320 0.80 -0.8
1,670,751 - A4249_RS08320 0.80 +0.4
1,670,751 - A4249_RS08320 0.80 +0.1
1,670,751 - A4249_RS08320 0.80 -0.3
1,670,752 + A4249_RS08320 0.80 -0.3
1,670,752 + A4249_RS08320 0.80 +1.1
1,670,752 + A4249_RS08320 0.80 -0.0
1,670,753 - A4249_RS08320 0.80 -0.8
1,670,753 - A4249_RS08320 0.80 +0.5
1,670,753 - A4249_RS08320 0.80 +1.0
1,671,118 + +0.3
1,671,119 - +0.8
1,671,119 - +1.4
1,671,142 - +0.1
1,671,152 + +1.1
1,671,152 + -0.1
1,671,152 + -0.0
1,671,152 + -0.2
1,671,152 + +0.5
1,671,153 - -0.5
1,671,153 - -0.9
1,671,153 - +1.1
1,671,153 - -0.3
1,671,153 - -1.3
1,671,153 - +0.4
1,671,153 - +0.1
1,671,153 - +1.0
1,671,153 - -0.6
1,671,427 + A4249_RS08325 0.12 +1.4
1,671,427 + A4249_RS08325 0.12 -0.3
1,671,427 + A4249_RS08325 0.12 +0.6
1,671,427 + A4249_RS08325 0.12 -0.0
1,671,427 + A4249_RS08325 0.12 -0.4
1,671,427 + A4249_RS08325 0.12 +0.6
1,671,427 + A4249_RS08325 0.12 +0.0
1,671,427 + A4249_RS08325 0.12 +0.3
1,671,427 + A4249_RS08325 0.12 -1.1
1,671,428 - A4249_RS08325 0.12 +0.3
1,671,428 - A4249_RS08325 0.12 +0.3
1,671,428 - A4249_RS08325 0.12 -0.4
1,671,428 - A4249_RS08325 0.12 +0.2
1,671,428 - A4249_RS08325 0.12 -0.4
1,671,428 - A4249_RS08325 0.12 +1.6
1,671,428 - A4249_RS08325 0.12 -2.4
1,671,506 + A4249_RS08325 0.15 -0.0
1,671,507 - A4249_RS08325 0.15 -0.1
1,671,748 + A4249_RS08325 0.26 +1.2
1,671,748 + A4249_RS08325 0.26 +0.0
1,671,749 - A4249_RS08325 0.26 -0.9
1,671,980 - A4249_RS08325 0.36 -0.1
1,671,980 - A4249_RS08325 0.36 -0.0
1,672,055 - A4249_RS08325 0.39 +0.5
1,672,111 + A4249_RS08325 0.41 +1.2
1,672,111 + A4249_RS08325 0.41 +0.6
1,672,111 + A4249_RS08325 0.41 -0.1
1,672,111 + A4249_RS08325 0.41 +1.2
1,672,112 - A4249_RS08325 0.41 -0.7
1,672,245 + A4249_RS08325 0.47 +0.6
1,672,245 + A4249_RS08325 0.47 +0.2
1,672,245 + A4249_RS08325 0.47 +0.4
1,672,245 + A4249_RS08325 0.47 +0.0
1,672,245 + A4249_RS08325 0.47 +0.5
1,672,245 + A4249_RS08325 0.47 -1.2
1,672,245 + A4249_RS08325 0.47 -0.8
1,672,245 + A4249_RS08325 0.47 -0.3
1,672,245 + A4249_RS08325 0.47 +1.0
1,672,246 - A4249_RS08325 0.47 -0.4
1,672,246 - A4249_RS08325 0.47 -0.4
1,672,246 - A4249_RS08325 0.47 -2.1
1,672,288 + A4249_RS08325 0.49 +0.8
1,672,289 - A4249_RS08325 0.49 -0.6
1,672,289 - A4249_RS08325 0.49 +0.8
1,672,378 + A4249_RS08325 0.53 +0.4
1,672,379 - A4249_RS08325 0.53 -0.2
1,672,379 - A4249_RS08325 0.53 +0.8
1,672,585 + A4249_RS08325 0.62 +0.7
1,672,780 + A4249_RS08325 0.70 -1.0
1,672,781 - A4249_RS08325 0.70 -1.1
1,672,781 - A4249_RS08325 0.70 -1.0
1,672,855 + A4249_RS08325 0.74 +0.4
1,672,855 + A4249_RS08325 0.74 +0.6
1,673,014 + A4249_RS08325 0.81 -1.0
1,673,014 + A4249_RS08325 0.81 -0.3
1,673,014 + A4249_RS08325 0.81 -0.0
1,673,015 - A4249_RS08325 0.81 +0.3
1,673,015 - A4249_RS08325 0.81 +0.3
1,673,015 - A4249_RS08325 0.81 -0.5
1,673,015 - A4249_RS08325 0.81 +0.7
1,673,015 - A4249_RS08325 0.81 +0.5
1,673,016 + A4249_RS08325 0.81 +0.2
1,673,016 + A4249_RS08325 0.81 +0.4
1,673,017 - A4249_RS08325 0.81 -1.4
1,673,017 - A4249_RS08325 0.81 +0.4
1,673,017 - A4249_RS08325 0.81 +0.8
1,673,017 - A4249_RS08325 0.81 +0.3
1,673,026 + A4249_RS08325 0.81 -1.4
1,673,155 + A4249_RS08325 0.87 -1.0
1,673,155 + A4249_RS08325 0.87 -0.2
1,673,155 + A4249_RS08325 0.87 -0.1
1,673,839 - A4249_RS08330 0.54 -0.7
1,673,880 + A4249_RS08330 0.60 +0.4
1,673,880 + A4249_RS08330 0.60 -0.6
1,673,880 + A4249_RS08330 0.60 +0.2
1,673,880 + A4249_RS08330 0.60 +0.5
1,673,880 + A4249_RS08330 0.60 -0.9
1,673,881 - A4249_RS08330 0.60 -0.9
1,673,881 - A4249_RS08330 0.60 +0.6
1,673,881 - A4249_RS08330 0.60 -1.2
1,673,881 - A4249_RS08330 0.60 -0.2
1,673,897 + A4249_RS08330 0.62 +0.2
1,673,898 - A4249_RS08330 0.62 +0.0
1,673,898 - A4249_RS08330 0.62 +0.3
1,674,223 + A4249_RS08335 0.14 -0.3
1,674,223 + A4249_RS08335 0.14 +0.2
1,674,224 - A4249_RS08335 0.15 -0.2
1,674,224 - A4249_RS08335 0.15 -0.0
1,674,224 - A4249_RS08335 0.15 +0.3
1,674,224 - A4249_RS08335 0.15 -0.3
1,674,224 - A4249_RS08335 0.15 +0.9
1,674,373 + A4249_RS08335 0.51 +0.4
1,674,373 + A4249_RS08335 0.51 +1.0
1,674,373 + A4249_RS08335 0.51 +1.1
1,674,373 + A4249_RS08335 0.51 +0.4
1,674,373 + A4249_RS08335 0.51 -0.2
1,674,373 + A4249_RS08335 0.51 -0.4
1,674,373 + A4249_RS08335 0.51 -0.7
1,674,373 + A4249_RS08335 0.51 +0.6
1,674,373 + A4249_RS08335 0.51 +0.5
1,674,373 + A4249_RS08335 0.51 -0.7
1,674,373 + A4249_RS08335 0.51 -0.2
1,674,373 + A4249_RS08335 0.51 +0.1
1,674,373 + A4249_RS08335 0.51 -0.4
1,674,374 - A4249_RS08335 0.51 +0.0
1,674,374 - A4249_RS08335 0.51 -0.4
1,674,374 - A4249_RS08335 0.51 -0.3
1,674,447 + A4249_RS08335 0.69 -0.2
1,674,447 + A4249_RS08335 0.69 -0.1
1,674,447 + A4249_RS08335 0.69 -0.4
1,674,448 - A4249_RS08335 0.69 +0.7
1,674,448 - A4249_RS08335 0.69 +0.2
1,674,448 - A4249_RS08335 0.69 +1.5
1,674,448 - A4249_RS08335 0.69 +0.8

Or see this region's nucleotide sequence