Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08280 and A4249_RS08285 are separated by 42 nucleotides A4249_RS08285 and A4249_RS08290 are separated by 473 nucleotides A4249_RS08290 and A4249_RS08295 are separated by 38 nucleotides A4249_RS08295 and A4249_RS08300 are separated by 176 nucleotides
A4249_RS08280: A4249_RS08280 - EAL domain-containing protein, at 1,664,116 to 1,664,883
_RS08280
A4249_RS08285: A4249_RS08285 - preQ(1) synthase, at 1,664,926 to 1,665,387
_RS08285
A4249_RS08290: A4249_RS08290 - nitronate monooxygenase family protein, at 1,665,861 to 1,666,793
_RS08290
A4249_RS08295: A4249_RS08295 - TorF family putative porin, at 1,666,832 to 1,667,548
_RS08295
A4249_RS08300: A4249_RS08300 - cold-shock protein, at 1,667,725 to 1,667,937
_RS08300
Position (kb)
1665
1666
1667 Strain fitness (log2 ratio)
-2
-1
0
1 at 1664.927 kb on + strand at 1664.928 kb on - strand at 1665.038 kb on + strand, within A4249_RS08285 at 1665.146 kb on + strand, within A4249_RS08285 at 1665.146 kb on + strand, within A4249_RS08285 at 1665.146 kb on + strand, within A4249_RS08285 at 1665.192 kb on - strand, within A4249_RS08285 at 1665.275 kb on + strand, within A4249_RS08285 at 1665.275 kb on + strand, within A4249_RS08285 at 1665.275 kb on + strand, within A4249_RS08285 at 1665.398 kb on + strand at 1665.398 kb on + strand at 1665.398 kb on + strand at 1665.399 kb on - strand at 1665.399 kb on - strand at 1665.608 kb on - strand at 1665.608 kb on - strand at 1665.608 kb on - strand at 1665.608 kb on - strand at 1665.621 kb on + strand at 1665.621 kb on + strand at 1665.621 kb on + strand at 1665.621 kb on + strand at 1665.621 kb on + strand at 1665.621 kb on + strand at 1665.621 kb on + strand at 1665.621 kb on + strand at 1665.621 kb on + strand at 1665.622 kb on - strand at 1665.622 kb on - strand at 1665.622 kb on - strand at 1665.622 kb on - strand at 1665.622 kb on - strand at 1665.622 kb on - strand at 1665.622 kb on - strand at 1665.622 kb on - strand at 1665.622 kb on - strand at 1665.622 kb on - strand at 1665.673 kb on + strand at 1665.673 kb on + strand at 1665.674 kb on - strand at 1665.674 kb on - strand at 1665.689 kb on + strand at 1665.689 kb on + strand at 1665.689 kb on + strand at 1665.689 kb on + strand at 1665.689 kb on + strand at 1665.689 kb on + strand at 1665.689 kb on + strand at 1665.689 kb on + strand at 1665.690 kb on - strand at 1665.690 kb on - strand at 1665.690 kb on - strand at 1665.755 kb on - strand at 1665.755 kb on - strand at 1665.755 kb on - strand at 1665.755 kb on - strand at 1665.763 kb on + strand at 1665.834 kb on - strand at 1665.834 kb on - strand at 1666.443 kb on + strand, within A4249_RS08290 at 1666.443 kb on + strand, within A4249_RS08290 at 1666.443 kb on + strand, within A4249_RS08290 at 1666.443 kb on + strand, within A4249_RS08290 at 1666.443 kb on + strand, within A4249_RS08290 at 1666.443 kb on + strand, within A4249_RS08290 at 1666.443 kb on + strand, within A4249_RS08290 at 1666.444 kb on - strand, within A4249_RS08290 at 1666.444 kb on - strand, within A4249_RS08290 at 1666.444 kb on - strand, within A4249_RS08290 at 1666.444 kb on - strand, within A4249_RS08290 at 1666.444 kb on - strand, within A4249_RS08290 at 1666.444 kb on - strand, within A4249_RS08290 at 1666.444 kb on - strand, within A4249_RS08290 at 1666.444 kb on - strand, within A4249_RS08290 at 1666.444 kb on - strand, within A4249_RS08290 at 1666.444 kb on - strand, within A4249_RS08290 at 1666.444 kb on - strand, within A4249_RS08290 at 1666.445 kb on + strand, within A4249_RS08290 at 1666.445 kb on + strand, within A4249_RS08290 at 1666.445 kb on + strand, within A4249_RS08290 at 1666.446 kb on - strand, within A4249_RS08290 at 1666.494 kb on + strand, within A4249_RS08290 at 1666.494 kb on + strand, within A4249_RS08290 at 1666.494 kb on + strand, within A4249_RS08290 at 1666.494 kb on + strand, within A4249_RS08290 at 1666.495 kb on - strand, within A4249_RS08290 at 1666.495 kb on - strand, within A4249_RS08290 at 1666.495 kb on - strand, within A4249_RS08290 at 1666.495 kb on - strand, within A4249_RS08290 at 1666.791 kb on + strand at 1666.792 kb on - strand at 1667.012 kb on + strand, within A4249_RS08295 at 1667.057 kb on + strand, within A4249_RS08295 at 1667.057 kb on + strand, within A4249_RS08295 at 1667.057 kb on + strand, within A4249_RS08295 at 1667.058 kb on - strand, within A4249_RS08295 at 1667.058 kb on - strand, within A4249_RS08295 at 1667.058 kb on - strand, within A4249_RS08295 at 1667.058 kb on - strand, within A4249_RS08295 at 1667.058 kb on - strand, within A4249_RS08295 at 1667.058 kb on - strand, within A4249_RS08295 at 1667.058 kb on - strand, within A4249_RS08295 at 1667.171 kb on + strand, within A4249_RS08295 at 1667.171 kb on + strand, within A4249_RS08295 at 1667.172 kb on - strand, within A4249_RS08295 at 1667.201 kb on + strand, within A4249_RS08295 at 1667.201 kb on + strand, within A4249_RS08295 at 1667.201 kb on + strand, within A4249_RS08295 at 1667.201 kb on + strand, within A4249_RS08295 at 1667.202 kb on - strand, within A4249_RS08295 at 1667.279 kb on + strand, within A4249_RS08295 at 1667.280 kb on - strand, within A4249_RS08295 at 1667.409 kb on - strand, within A4249_RS08295 at 1667.435 kb on + strand, within A4249_RS08295 at 1667.435 kb on + strand, within A4249_RS08295 at 1667.435 kb on + strand, within A4249_RS08295 at 1667.435 kb on + strand, within A4249_RS08295 at 1667.435 kb on + strand, within A4249_RS08295 at 1667.435 kb on + strand, within A4249_RS08295 at 1667.436 kb on - strand, within A4249_RS08295 at 1667.436 kb on - strand, within A4249_RS08295 at 1667.436 kb on - strand, within A4249_RS08295 at 1667.436 kb on - strand, within A4249_RS08295 at 1667.436 kb on - strand, within A4249_RS08295 at 1667.436 kb on - strand, within A4249_RS08295 at 1667.436 kb on - strand, within A4249_RS08295 at 1667.436 kb on - strand, within A4249_RS08295 at 1667.471 kb on + strand, within A4249_RS08295 at 1667.471 kb on + strand, within A4249_RS08295 at 1667.471 kb on + strand, within A4249_RS08295 at 1667.474 kb on + strand, within A4249_RS08295 at 1667.474 kb on + strand, within A4249_RS08295 at 1667.474 kb on + strand, within A4249_RS08295 at 1667.475 kb on - strand, within A4249_RS08295 at 1667.507 kb on + strand at 1667.507 kb on + strand at 1667.507 kb on + strand at 1667.507 kb on + strand at 1667.507 kb on + strand at 1667.507 kb on + strand at 1667.507 kb on + strand at 1667.508 kb on - strand at 1667.508 kb on - strand at 1667.508 kb on - strand at 1667.508 kb on - strand at 1667.565 kb on + strand at 1667.587 kb on + strand at 1667.587 kb on + strand at 1667.587 kb on + strand at 1667.587 kb on + strand at 1667.588 kb on - strand at 1667.588 kb on - strand at 1667.588 kb on - strand at 1667.588 kb on - strand at 1667.588 kb on - strand at 1667.588 kb on - strand at 1667.588 kb on - strand at 1667.741 kb on + strand at 1667.741 kb on + strand at 1667.741 kb on + strand at 1667.741 kb on + strand at 1667.741 kb on + strand at 1667.742 kb on - strand at 1667.742 kb on - strand at 1667.742 kb on - strand at 1667.742 kb on - strand at 1667.749 kb on + strand, within A4249_RS08300 at 1667.750 kb on - strand, within A4249_RS08300 at 1667.750 kb on - strand, within A4249_RS08300
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,664,927 + -0.7 1,664,928 - -1.1 1,665,038 + A4249_RS08285 0.24 -2.3 1,665,146 + A4249_RS08285 0.48 +0.1 1,665,146 + A4249_RS08285 0.48 +0.2 1,665,146 + A4249_RS08285 0.48 -1.5 1,665,192 - A4249_RS08285 0.58 -0.9 1,665,275 + A4249_RS08285 0.76 -1.2 1,665,275 + A4249_RS08285 0.76 +0.6 1,665,275 + A4249_RS08285 0.76 -0.8 1,665,398 + +0.2 1,665,398 + +0.5 1,665,398 + -0.2 1,665,399 - -1.0 1,665,399 - +0.1 1,665,608 - +0.6 1,665,608 - +0.1 1,665,608 - +0.1 1,665,608 - +0.6 1,665,621 + -0.9 1,665,621 + +0.2 1,665,621 + -0.4 1,665,621 + +1.3 1,665,621 + -0.3 1,665,621 + +0.3 1,665,621 + -0.5 1,665,621 + +0.1 1,665,621 + -0.4 1,665,622 - +0.7 1,665,622 - -0.1 1,665,622 - +0.0 1,665,622 - +1.1 1,665,622 - -0.1 1,665,622 - +0.4 1,665,622 - -0.6 1,665,622 - +0.8 1,665,622 - +0.6 1,665,622 - +0.1 1,665,673 + -1.4 1,665,673 + +1.1 1,665,674 - +0.1 1,665,674 - +0.4 1,665,689 + +0.2 1,665,689 + +0.1 1,665,689 + +0.2 1,665,689 + +0.2 1,665,689 + -0.2 1,665,689 + +0.1 1,665,689 + +0.2 1,665,689 + -0.4 1,665,690 - -0.8 1,665,690 - +0.3 1,665,690 - -0.9 1,665,755 - -1.1 1,665,755 - -0.6 1,665,755 - +1.3 1,665,755 - +0.6 1,665,763 + +1.0 1,665,834 - +0.2 1,665,834 - -0.4 1,666,443 + A4249_RS08290 0.62 -1.0 1,666,443 + A4249_RS08290 0.62 -0.6 1,666,443 + A4249_RS08290 0.62 -0.2 1,666,443 + A4249_RS08290 0.62 -0.4 1,666,443 + A4249_RS08290 0.62 -0.4 1,666,443 + A4249_RS08290 0.62 -1.5 1,666,443 + A4249_RS08290 0.62 +0.2 1,666,444 - A4249_RS08290 0.62 -0.3 1,666,444 - A4249_RS08290 0.62 +0.0 1,666,444 - A4249_RS08290 0.62 -0.3 1,666,444 - A4249_RS08290 0.62 -0.6 1,666,444 - A4249_RS08290 0.62 -0.3 1,666,444 - A4249_RS08290 0.62 +0.8 1,666,444 - A4249_RS08290 0.62 +0.1 1,666,444 - A4249_RS08290 0.62 -0.5 1,666,444 - A4249_RS08290 0.62 -0.3 1,666,444 - A4249_RS08290 0.62 +0.1 1,666,444 - A4249_RS08290 0.62 -0.0 1,666,445 + A4249_RS08290 0.63 -0.4 1,666,445 + A4249_RS08290 0.63 +0.3 1,666,445 + A4249_RS08290 0.63 +0.8 1,666,446 - A4249_RS08290 0.63 -0.5 1,666,494 + A4249_RS08290 0.68 +0.3 1,666,494 + A4249_RS08290 0.68 +0.2 1,666,494 + A4249_RS08290 0.68 -0.1 1,666,494 + A4249_RS08290 0.68 -1.3 1,666,495 - A4249_RS08290 0.68 +0.2 1,666,495 - A4249_RS08290 0.68 -0.2 1,666,495 - A4249_RS08290 0.68 +0.6 1,666,495 - A4249_RS08290 0.68 -1.3 1,666,791 + -0.6 1,666,792 - +0.9 1,667,012 + A4249_RS08295 0.25 -0.6 1,667,057 + A4249_RS08295 0.31 -0.7 1,667,057 + A4249_RS08295 0.31 -0.2 1,667,057 + A4249_RS08295 0.31 +0.1 1,667,058 - A4249_RS08295 0.32 +0.3 1,667,058 - A4249_RS08295 0.32 -0.0 1,667,058 - A4249_RS08295 0.32 -0.7 1,667,058 - A4249_RS08295 0.32 +0.1 1,667,058 - A4249_RS08295 0.32 -0.4 1,667,058 - A4249_RS08295 0.32 -0.1 1,667,058 - A4249_RS08295 0.32 -0.2 1,667,171 + A4249_RS08295 0.47 +0.0 1,667,171 + A4249_RS08295 0.47 -0.4 1,667,172 - A4249_RS08295 0.47 -0.7 1,667,201 + A4249_RS08295 0.51 -0.1 1,667,201 + A4249_RS08295 0.51 +0.2 1,667,201 + A4249_RS08295 0.51 -0.3 1,667,201 + A4249_RS08295 0.51 +0.2 1,667,202 - A4249_RS08295 0.52 +0.6 1,667,279 + A4249_RS08295 0.62 -1.7 1,667,280 - A4249_RS08295 0.62 +0.4 1,667,409 - A4249_RS08295 0.80 -0.4 1,667,435 + A4249_RS08295 0.84 +0.8 1,667,435 + A4249_RS08295 0.84 +0.5 1,667,435 + A4249_RS08295 0.84 -0.3 1,667,435 + A4249_RS08295 0.84 +0.4 1,667,435 + A4249_RS08295 0.84 +0.6 1,667,435 + A4249_RS08295 0.84 +0.3 1,667,436 - A4249_RS08295 0.84 -0.4 1,667,436 - A4249_RS08295 0.84 +0.2 1,667,436 - A4249_RS08295 0.84 +0.3 1,667,436 - A4249_RS08295 0.84 -0.4 1,667,436 - A4249_RS08295 0.84 +0.6 1,667,436 - A4249_RS08295 0.84 -0.3 1,667,436 - A4249_RS08295 0.84 -0.4 1,667,436 - A4249_RS08295 0.84 +0.6 1,667,471 + A4249_RS08295 0.89 +0.1 1,667,471 + A4249_RS08295 0.89 -0.2 1,667,471 + A4249_RS08295 0.89 -0.3 1,667,474 + A4249_RS08295 0.90 +1.0 1,667,474 + A4249_RS08295 0.90 -0.7 1,667,474 + A4249_RS08295 0.90 +0.0 1,667,475 - A4249_RS08295 0.90 -0.1 1,667,507 + -0.0 1,667,507 + -1.5 1,667,507 + +0.0 1,667,507 + +0.9 1,667,507 + +0.2 1,667,507 + -1.2 1,667,507 + +0.6 1,667,508 - -0.3 1,667,508 - +1.4 1,667,508 - +0.2 1,667,508 - -0.3 1,667,565 + -1.2 1,667,587 + -1.4 1,667,587 + +0.4 1,667,587 + -1.0 1,667,587 + -0.2 1,667,588 - -0.6 1,667,588 - -0.4 1,667,588 - +0.3 1,667,588 - -0.3 1,667,588 - +0.2 1,667,588 - +0.4 1,667,588 - +0.5 1,667,741 + +0.3 1,667,741 + -0.1 1,667,741 + -0.6 1,667,741 + -0.3 1,667,741 + -0.0 1,667,742 - +1.0 1,667,742 - +0.4 1,667,742 - -0.5 1,667,742 - +0.2 1,667,749 + A4249_RS08300 0.11 +0.2 1,667,750 - A4249_RS08300 0.12 -0.0 1,667,750 - A4249_RS08300 0.12 +0.1
Or see this region's nucleotide sequence