Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS07110 and A4249_RS07115 are separated by 12 nucleotides A4249_RS07115 and A4249_RS07120 are separated by 13 nucleotides A4249_RS07120 and A4249_RS07125 are separated by 48 nucleotides
A4249_RS07110: A4249_RS07110 - DUF4043 family protein, at 1,427,953 to 1,429,080
_RS07110
A4249_RS07115: A4249_RS07115 - hypothetical protein, at 1,429,093 to 1,429,497
_RS07115
A4249_RS07120: A4249_RS07120 - hypothetical protein, at 1,429,511 to 1,429,897
_RS07120
A4249_RS07125: A4249_RS07125 - hypothetical protein, at 1,429,946 to 1,430,512
_RS07125
Position (kb)
1429
1430 Strain fitness (log2 ratio)
-2
-1
0
1 at 1428.196 kb on + strand, within A4249_RS07110 at 1428.196 kb on + strand, within A4249_RS07110 at 1428.196 kb on + strand, within A4249_RS07110 at 1428.196 kb on + strand, within A4249_RS07110 at 1428.197 kb on - strand, within A4249_RS07110 at 1428.415 kb on + strand, within A4249_RS07110 at 1428.415 kb on + strand, within A4249_RS07110 at 1428.416 kb on - strand, within A4249_RS07110 at 1428.582 kb on + strand, within A4249_RS07110 at 1428.582 kb on + strand, within A4249_RS07110 at 1428.582 kb on + strand, within A4249_RS07110 at 1428.583 kb on - strand, within A4249_RS07110 at 1428.772 kb on + strand, within A4249_RS07110 at 1428.772 kb on + strand, within A4249_RS07110 at 1428.772 kb on + strand, within A4249_RS07110 at 1428.773 kb on - strand, within A4249_RS07110 at 1428.773 kb on - strand, within A4249_RS07110 at 1428.773 kb on - strand, within A4249_RS07110 at 1428.773 kb on - strand, within A4249_RS07110 at 1428.773 kb on - strand, within A4249_RS07110 at 1428.773 kb on - strand, within A4249_RS07110 at 1428.880 kb on + strand, within A4249_RS07110 at 1428.956 kb on - strand, within A4249_RS07110 at 1428.956 kb on - strand, within A4249_RS07110 at 1428.956 kb on - strand, within A4249_RS07110 at 1429.075 kb on + strand at 1429.075 kb on + strand at 1429.076 kb on - strand at 1429.076 kb on - strand at 1429.076 kb on - strand at 1429.076 kb on - strand at 1429.078 kb on + strand at 1429.078 kb on + strand at 1429.078 kb on + strand at 1429.078 kb on + strand at 1429.078 kb on + strand at 1429.078 kb on + strand at 1429.079 kb on - strand at 1429.079 kb on - strand at 1429.079 kb on - strand at 1429.079 kb on - strand at 1429.079 kb on - strand at 1429.079 kb on - strand at 1429.174 kb on + strand, within A4249_RS07115 at 1429.174 kb on + strand, within A4249_RS07115 at 1429.175 kb on - strand, within A4249_RS07115 at 1429.402 kb on + strand, within A4249_RS07115 at 1429.402 kb on + strand, within A4249_RS07115 at 1429.402 kb on + strand, within A4249_RS07115 at 1429.402 kb on + strand, within A4249_RS07115 at 1429.402 kb on + strand, within A4249_RS07115 at 1429.402 kb on + strand, within A4249_RS07115 at 1429.403 kb on - strand, within A4249_RS07115 at 1429.403 kb on - strand, within A4249_RS07115 at 1429.403 kb on - strand, within A4249_RS07115 at 1429.403 kb on - strand, within A4249_RS07115 at 1429.471 kb on + strand at 1429.471 kb on + strand at 1429.472 kb on - strand at 1429.472 kb on - strand at 1429.483 kb on + strand at 1429.483 kb on + strand at 1429.483 kb on + strand at 1429.483 kb on + strand at 1429.483 kb on + strand at 1429.484 kb on - strand at 1429.484 kb on - strand at 1429.484 kb on - strand at 1429.484 kb on - strand at 1429.484 kb on - strand at 1429.495 kb on + strand at 1429.656 kb on - strand, within A4249_RS07120 at 1429.656 kb on - strand, within A4249_RS07120 at 1429.656 kb on - strand, within A4249_RS07120 at 1429.656 kb on - strand, within A4249_RS07120 at 1429.656 kb on - strand, within A4249_RS07120 at 1430.105 kb on + strand, within A4249_RS07125 at 1430.105 kb on + strand, within A4249_RS07125 at 1430.106 kb on - strand, within A4249_RS07125 at 1430.221 kb on + strand, within A4249_RS07125 at 1430.221 kb on + strand, within A4249_RS07125 at 1430.221 kb on + strand, within A4249_RS07125 at 1430.221 kb on + strand, within A4249_RS07125 at 1430.221 kb on + strand, within A4249_RS07125 at 1430.221 kb on + strand, within A4249_RS07125 at 1430.222 kb on - strand, within A4249_RS07125 at 1430.222 kb on - strand, within A4249_RS07125 at 1430.222 kb on - strand, within A4249_RS07125 at 1430.222 kb on - strand, within A4249_RS07125 at 1430.280 kb on - strand, within A4249_RS07125 at 1430.280 kb on - strand, within A4249_RS07125 at 1430.466 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,428,196 + A4249_RS07110 0.22 -0.4 1,428,196 + A4249_RS07110 0.22 +0.7 1,428,196 + A4249_RS07110 0.22 +0.5 1,428,196 + A4249_RS07110 0.22 -1.0 1,428,197 - A4249_RS07110 0.22 -0.3 1,428,415 + A4249_RS07110 0.41 +0.0 1,428,415 + A4249_RS07110 0.41 -0.1 1,428,416 - A4249_RS07110 0.41 -1.2 1,428,582 + A4249_RS07110 0.56 -0.1 1,428,582 + A4249_RS07110 0.56 +0.0 1,428,582 + A4249_RS07110 0.56 +0.3 1,428,583 - A4249_RS07110 0.56 -0.5 1,428,772 + A4249_RS07110 0.73 +0.1 1,428,772 + A4249_RS07110 0.73 -0.2 1,428,772 + A4249_RS07110 0.73 -0.2 1,428,773 - A4249_RS07110 0.73 -0.4 1,428,773 - A4249_RS07110 0.73 +0.4 1,428,773 - A4249_RS07110 0.73 -0.5 1,428,773 - A4249_RS07110 0.73 -0.1 1,428,773 - A4249_RS07110 0.73 -1.6 1,428,773 - A4249_RS07110 0.73 -1.0 1,428,880 + A4249_RS07110 0.82 -1.2 1,428,956 - A4249_RS07110 0.89 -0.1 1,428,956 - A4249_RS07110 0.89 -0.3 1,428,956 - A4249_RS07110 0.89 +0.3 1,429,075 + -0.3 1,429,075 + -0.3 1,429,076 - +0.3 1,429,076 - +0.7 1,429,076 - +0.1 1,429,076 - -1.3 1,429,078 + +0.3 1,429,078 + +0.3 1,429,078 + -1.3 1,429,078 + +0.2 1,429,078 + +0.2 1,429,078 + -0.5 1,429,079 - -0.7 1,429,079 - -2.3 1,429,079 - -0.7 1,429,079 - -1.9 1,429,079 - -0.2 1,429,079 - +0.4 1,429,174 + A4249_RS07115 0.20 -0.8 1,429,174 + A4249_RS07115 0.20 +0.6 1,429,175 - A4249_RS07115 0.20 -0.8 1,429,402 + A4249_RS07115 0.76 -1.0 1,429,402 + A4249_RS07115 0.76 -0.7 1,429,402 + A4249_RS07115 0.76 -1.0 1,429,402 + A4249_RS07115 0.76 -2.1 1,429,402 + A4249_RS07115 0.76 -0.6 1,429,402 + A4249_RS07115 0.76 +0.9 1,429,403 - A4249_RS07115 0.77 +0.4 1,429,403 - A4249_RS07115 0.77 -0.9 1,429,403 - A4249_RS07115 0.77 -0.4 1,429,403 - A4249_RS07115 0.77 -0.2 1,429,471 + -0.5 1,429,471 + -0.5 1,429,472 - -0.1 1,429,472 - -0.8 1,429,483 + +0.7 1,429,483 + -1.9 1,429,483 + -1.2 1,429,483 + -0.1 1,429,483 + -0.8 1,429,484 - +0.9 1,429,484 - -0.2 1,429,484 - -0.4 1,429,484 - +0.8 1,429,484 - -0.4 1,429,495 + -0.5 1,429,656 - A4249_RS07120 0.37 -0.4 1,429,656 - A4249_RS07120 0.37 -0.3 1,429,656 - A4249_RS07120 0.37 -0.3 1,429,656 - A4249_RS07120 0.37 -0.6 1,429,656 - A4249_RS07120 0.37 -0.9 1,430,105 + A4249_RS07125 0.28 -0.9 1,430,105 + A4249_RS07125 0.28 -0.5 1,430,106 - A4249_RS07125 0.28 +0.1 1,430,221 + A4249_RS07125 0.49 +0.6 1,430,221 + A4249_RS07125 0.49 -0.0 1,430,221 + A4249_RS07125 0.49 +0.7 1,430,221 + A4249_RS07125 0.49 -0.1 1,430,221 + A4249_RS07125 0.49 -0.5 1,430,221 + A4249_RS07125 0.49 +0.5 1,430,222 - A4249_RS07125 0.49 -0.4 1,430,222 - A4249_RS07125 0.49 -0.1 1,430,222 - A4249_RS07125 0.49 -0.3 1,430,222 - A4249_RS07125 0.49 -0.6 1,430,280 - A4249_RS07125 0.59 -1.6 1,430,280 - A4249_RS07125 0.59 +0.1 1,430,466 - -0.2
Or see this region's nucleotide sequence