Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS06630 and A4249_RS06635 are separated by 6 nucleotides A4249_RS06635 and A4249_RS06640 are separated by 218 nucleotides
A4249_RS06630: A4249_RS06630 - histidine ammonia-lyase, at 1,349,999 to 1,351,528
_RS06630
A4249_RS06635: A4249_RS06635 - manganese efflux pump MntP family protein, at 1,351,535 to 1,352,107
_RS06635
A4249_RS06640: A4249_RS06640 - PPC domain-containing protein, at 1,352,326 to 1,354,224
_RS06640
Position (kb)
1351
1352
1353 Strain fitness (log2 ratio)
-2
-1
0
1 at 1350.839 kb on + strand, within A4249_RS06630 at 1350.839 kb on + strand, within A4249_RS06630 at 1350.839 kb on + strand, within A4249_RS06630 at 1351.051 kb on + strand, within A4249_RS06630 at 1351.051 kb on + strand, within A4249_RS06630 at 1351.051 kb on + strand, within A4249_RS06630 at 1351.052 kb on - strand, within A4249_RS06630 at 1351.052 kb on - strand, within A4249_RS06630 at 1351.300 kb on + strand, within A4249_RS06630 at 1351.424 kb on + strand at 1351.424 kb on + strand at 1351.439 kb on + strand at 1351.439 kb on + strand at 1351.439 kb on + strand at 1351.440 kb on - strand at 1351.440 kb on - strand at 1351.440 kb on - strand at 1351.714 kb on + strand, within A4249_RS06635 at 1351.714 kb on + strand, within A4249_RS06635 at 1351.714 kb on + strand, within A4249_RS06635 at 1351.714 kb on + strand, within A4249_RS06635 at 1351.714 kb on + strand, within A4249_RS06635 at 1351.715 kb on - strand, within A4249_RS06635 at 1351.715 kb on - strand, within A4249_RS06635 at 1351.715 kb on - strand, within A4249_RS06635 at 1351.715 kb on - strand, within A4249_RS06635 at 1351.715 kb on - strand, within A4249_RS06635 at 1351.715 kb on - strand, within A4249_RS06635 at 1351.715 kb on - strand, within A4249_RS06635 at 1351.715 kb on - strand, within A4249_RS06635 at 1352.042 kb on + strand, within A4249_RS06635 at 1352.226 kb on + strand at 1352.226 kb on + strand at 1352.226 kb on + strand at 1352.226 kb on + strand at 1352.226 kb on + strand at 1352.226 kb on + strand at 1352.226 kb on + strand at 1352.227 kb on - strand at 1352.227 kb on - strand at 1352.227 kb on - strand at 1352.227 kb on - strand at 1352.262 kb on + strand at 1352.262 kb on + strand at 1352.262 kb on + strand at 1352.263 kb on - strand at 1352.263 kb on - strand at 1352.263 kb on - strand at 1352.263 kb on - strand at 1352.287 kb on + strand at 1352.287 kb on + strand at 1352.287 kb on + strand at 1352.287 kb on + strand at 1352.288 kb on - strand at 1352.288 kb on - strand at 1352.417 kb on + strand at 1352.417 kb on + strand at 1352.418 kb on - strand at 1352.418 kb on - strand at 1352.441 kb on + strand at 1352.462 kb on + strand at 1352.462 kb on + strand at 1352.462 kb on + strand at 1352.462 kb on + strand at 1352.463 kb on - strand at 1352.463 kb on - strand at 1352.646 kb on - strand, within A4249_RS06640 at 1352.771 kb on + strand, within A4249_RS06640 at 1352.772 kb on - strand, within A4249_RS06640 at 1352.772 kb on - strand, within A4249_RS06640 at 1352.772 kb on - strand, within A4249_RS06640 at 1352.772 kb on - strand, within A4249_RS06640 at 1352.816 kb on + strand, within A4249_RS06640 at 1352.816 kb on + strand, within A4249_RS06640 at 1352.816 kb on + strand, within A4249_RS06640 at 1352.816 kb on + strand, within A4249_RS06640 at 1352.816 kb on + strand, within A4249_RS06640 at 1352.817 kb on - strand, within A4249_RS06640 at 1352.817 kb on - strand, within A4249_RS06640 at 1352.817 kb on - strand, within A4249_RS06640 at 1352.817 kb on - strand, within A4249_RS06640 at 1352.817 kb on - strand, within A4249_RS06640 at 1352.817 kb on - strand, within A4249_RS06640 at 1352.817 kb on - strand, within A4249_RS06640 at 1352.817 kb on - strand, within A4249_RS06640 at 1352.930 kb on + strand, within A4249_RS06640 at 1352.930 kb on + strand, within A4249_RS06640 at 1352.931 kb on - strand, within A4249_RS06640 at 1352.931 kb on - strand, within A4249_RS06640 at 1352.931 kb on - strand, within A4249_RS06640 at 1352.996 kb on + strand, within A4249_RS06640 at 1352.996 kb on + strand, within A4249_RS06640 at 1352.996 kb on + strand, within A4249_RS06640 at 1352.996 kb on + strand, within A4249_RS06640 at 1352.996 kb on + strand, within A4249_RS06640 at 1352.997 kb on - strand, within A4249_RS06640 at 1352.997 kb on - strand, within A4249_RS06640 at 1352.997 kb on - strand, within A4249_RS06640 at 1353.005 kb on + strand, within A4249_RS06640 at 1353.005 kb on + strand, within A4249_RS06640 at 1353.006 kb on - strand, within A4249_RS06640 at 1353.006 kb on - strand, within A4249_RS06640 at 1353.006 kb on - strand, within A4249_RS06640
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,350,839 + A4249_RS06630 0.55 +0.6 1,350,839 + A4249_RS06630 0.55 -0.3 1,350,839 + A4249_RS06630 0.55 -0.0 1,351,051 + A4249_RS06630 0.69 +0.4 1,351,051 + A4249_RS06630 0.69 -0.3 1,351,051 + A4249_RS06630 0.69 +0.3 1,351,052 - A4249_RS06630 0.69 +0.0 1,351,052 - A4249_RS06630 0.69 -1.0 1,351,300 + A4249_RS06630 0.85 +0.5 1,351,424 + -0.3 1,351,424 + +0.6 1,351,439 + +0.6 1,351,439 + -0.4 1,351,439 + -0.2 1,351,440 - +0.3 1,351,440 - +0.4 1,351,440 - +1.1 1,351,714 + A4249_RS06635 0.31 +0.1 1,351,714 + A4249_RS06635 0.31 -0.2 1,351,714 + A4249_RS06635 0.31 -0.5 1,351,714 + A4249_RS06635 0.31 -0.2 1,351,714 + A4249_RS06635 0.31 +0.6 1,351,715 - A4249_RS06635 0.31 +0.8 1,351,715 - A4249_RS06635 0.31 +0.7 1,351,715 - A4249_RS06635 0.31 -1.2 1,351,715 - A4249_RS06635 0.31 +0.3 1,351,715 - A4249_RS06635 0.31 -0.9 1,351,715 - A4249_RS06635 0.31 +0.2 1,351,715 - A4249_RS06635 0.31 +0.3 1,351,715 - A4249_RS06635 0.31 +0.2 1,352,042 + A4249_RS06635 0.88 -0.7 1,352,226 + +0.2 1,352,226 + +0.3 1,352,226 + +0.9 1,352,226 + -0.5 1,352,226 + -0.8 1,352,226 + +0.4 1,352,226 + -0.4 1,352,227 - -0.4 1,352,227 - -0.5 1,352,227 - +0.4 1,352,227 - -0.0 1,352,262 + +0.5 1,352,262 + -0.3 1,352,262 + -2.0 1,352,263 - -0.3 1,352,263 - +0.7 1,352,263 - +0.4 1,352,263 - +0.5 1,352,287 + -0.2 1,352,287 + -0.5 1,352,287 + -0.0 1,352,287 + -0.2 1,352,288 - +0.0 1,352,288 - +0.4 1,352,417 + +0.5 1,352,417 + -0.2 1,352,418 - -1.5 1,352,418 - +0.2 1,352,441 + -0.2 1,352,462 + -0.1 1,352,462 + -0.5 1,352,462 + -0.1 1,352,462 + -0.0 1,352,463 - +0.7 1,352,463 - -0.0 1,352,646 - A4249_RS06640 0.17 -1.3 1,352,771 + A4249_RS06640 0.23 +0.0 1,352,772 - A4249_RS06640 0.23 +1.1 1,352,772 - A4249_RS06640 0.23 -0.6 1,352,772 - A4249_RS06640 0.23 -1.2 1,352,772 - A4249_RS06640 0.23 -0.3 1,352,816 + A4249_RS06640 0.26 +0.6 1,352,816 + A4249_RS06640 0.26 +0.0 1,352,816 + A4249_RS06640 0.26 -0.1 1,352,816 + A4249_RS06640 0.26 -0.3 1,352,816 + A4249_RS06640 0.26 +0.2 1,352,817 - A4249_RS06640 0.26 -1.2 1,352,817 - A4249_RS06640 0.26 -0.9 1,352,817 - A4249_RS06640 0.26 +0.2 1,352,817 - A4249_RS06640 0.26 -0.5 1,352,817 - A4249_RS06640 0.26 +0.0 1,352,817 - A4249_RS06640 0.26 +0.3 1,352,817 - A4249_RS06640 0.26 -0.2 1,352,817 - A4249_RS06640 0.26 +0.0 1,352,930 + A4249_RS06640 0.32 -0.1 1,352,930 + A4249_RS06640 0.32 -0.5 1,352,931 - A4249_RS06640 0.32 +0.7 1,352,931 - A4249_RS06640 0.32 -0.4 1,352,931 - A4249_RS06640 0.32 +0.2 1,352,996 + A4249_RS06640 0.35 -0.5 1,352,996 + A4249_RS06640 0.35 +0.5 1,352,996 + A4249_RS06640 0.35 +0.1 1,352,996 + A4249_RS06640 0.35 -0.4 1,352,996 + A4249_RS06640 0.35 -0.6 1,352,997 - A4249_RS06640 0.35 -0.2 1,352,997 - A4249_RS06640 0.35 +0.2 1,352,997 - A4249_RS06640 0.35 +0.8 1,353,005 + A4249_RS06640 0.36 -0.4 1,353,005 + A4249_RS06640 0.36 -0.0 1,353,006 - A4249_RS06640 0.36 +0.1 1,353,006 - A4249_RS06640 0.36 +0.2 1,353,006 - A4249_RS06640 0.36 -0.8
Or see this region's nucleotide sequence