Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06300

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06290 and A4249_RS06295 are separated by 0 nucleotidesA4249_RS06295 and A4249_RS06300 overlap by 8 nucleotidesA4249_RS06300 and A4249_RS06305 overlap by 4 nucleotides A4249_RS06290: A4249_RS06290 - peptide-methionine (S)-S-oxide reductase MsrA, at 1,283,608 to 1,284,231 _RS06290 A4249_RS06295: A4249_RS06295 - ABC transporter ATP-binding protein, at 1,284,232 to 1,284,936 _RS06295 A4249_RS06300: A4249_RS06300 - lipoprotein-releasing ABC transporter permease subunit, at 1,284,929 to 1,286,215 _RS06300 A4249_RS06305: A4249_RS06305 - proline--tRNA ligase, at 1,286,212 to 1,287,528 _RS06305 Position (kb) 1284 1285 1286 1287Strain fitness (log2 ratio) -1 0 1at 1283.986 kb on + strand, within A4249_RS06290at 1283.986 kb on + strand, within A4249_RS06290at 1283.987 kb on - strand, within A4249_RS06290at 1284.133 kb on + strand, within A4249_RS06290at 1284.134 kb on - strand, within A4249_RS06290at 1284.134 kb on - strand, within A4249_RS06290at 1284.134 kb on - strand, within A4249_RS06290at 1284.157 kb on + strand, within A4249_RS06290at 1284.157 kb on + strand, within A4249_RS06290at 1284.157 kb on + strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.236 kb on + strandat 1284.237 kb on - strandat 1284.937 kb on - strandat 1284.937 kb on - strandat 1284.937 kb on - strandat 1284.937 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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1,283,986 + A4249_RS06290 0.61 +1.0
1,283,986 + A4249_RS06290 0.61 +0.3
1,283,987 - A4249_RS06290 0.61 -0.2
1,284,133 + A4249_RS06290 0.84 -0.5
1,284,134 - A4249_RS06290 0.84 +0.5
1,284,134 - A4249_RS06290 0.84 -0.1
1,284,134 - A4249_RS06290 0.84 +0.3
1,284,157 + A4249_RS06290 0.88 -1.1
1,284,157 + A4249_RS06290 0.88 -0.3
1,284,157 + A4249_RS06290 0.88 -1.6
1,284,158 - A4249_RS06290 0.88 -0.0
1,284,158 - A4249_RS06290 0.88 +0.3
1,284,158 - A4249_RS06290 0.88 +0.5
1,284,158 - A4249_RS06290 0.88 +0.8
1,284,158 - A4249_RS06290 0.88 -0.2
1,284,158 - A4249_RS06290 0.88 -0.5
1,284,158 - A4249_RS06290 0.88 -1.0
1,284,158 - A4249_RS06290 0.88 -0.8
1,284,236 + -0.7
1,284,237 - +0.2
1,284,937 - +0.2
1,284,937 - +1.3
1,284,937 - +0.4
1,284,937 - -0.6

Or see this region's nucleotide sequence