Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06230

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06225 and A4249_RS06230 are separated by 7 nucleotidesA4249_RS06230 and A4249_RS06235 are separated by 32 nucleotides A4249_RS06225: A4249_RS06225 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 1,267,272 to 1,268,285 _RS06225 A4249_RS06230: A4249_RS06230 - OmpH family outer membrane protein, at 1,268,293 to 1,268,898 _RS06230 A4249_RS06235: A4249_RS06235 - outer membrane protein assembly factor BamA, at 1,268,931 to 1,271,375 _RS06235 Position (kb) 1268 1269Strain fitness (log2 ratio) -1 0 1at 1268.294 kb on + strandat 1268.294 kb on + strandat 1268.294 kb on + strandat 1268.294 kb on + strandat 1268.294 kb on + strandat 1268.295 kb on - strandat 1268.295 kb on - strandat 1268.295 kb on - strandat 1268.295 kb on - strandat 1268.295 kb on - strandat 1268.295 kb on - strandat 1268.531 kb on + strand, within A4249_RS06230at 1268.777 kb on + strand, within A4249_RS06230at 1268.777 kb on + strand, within A4249_RS06230at 1268.780 kb on + strand, within A4249_RS06230at 1268.781 kb on - strand, within A4249_RS06230at 1268.932 kb on + strandat 1268.932 kb on + strandat 1268.933 kb on - strandat 1268.933 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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1,268,294 + -0.2
1,268,294 + -0.4
1,268,294 + -0.5
1,268,294 + -0.3
1,268,294 + -0.2
1,268,295 - -0.3
1,268,295 - +0.4
1,268,295 - +0.0
1,268,295 - +0.2
1,268,295 - -0.5
1,268,295 - -0.1
1,268,531 + A4249_RS06230 0.39 -0.2
1,268,777 + A4249_RS06230 0.80 -1.0
1,268,777 + A4249_RS06230 0.80 -0.6
1,268,780 + A4249_RS06230 0.80 -1.2
1,268,781 - A4249_RS06230 0.81 -0.2
1,268,932 + -1.2
1,268,932 + +0.4
1,268,933 - +0.3
1,268,933 - -0.2

Or see this region's nucleotide sequence