Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS06170 and A4249_RS06175 overlap by 4 nucleotides A4249_RS06175 and A4249_RS06180 are separated by 118 nucleotides A4249_RS06180 and A4249_RS06185 overlap by 20 nucleotides
A4249_RS06170: A4249_RS06170 - anthranilate phosphoribosyltransferase, at 1,255,345 to 1,256,382
_RS06170
A4249_RS06175: A4249_RS06175 - indole-3-glycerol phosphate synthase TrpC, at 1,256,379 to 1,257,173
_RS06175
A4249_RS06180: A4249_RS06180 - transcriptional repressor LexA, at 1,257,292 to 1,257,990
_RS06180
A4249_RS06185: A4249_RS06185 - ComEC/Rec2 family competence protein, at 1,257,971 to 1,260,157
_RS06185
Position (kb)
1256
1257
1258 Strain fitness (log2 ratio)
-1
0
1 at 1256.409 kb on + strand at 1257.171 kb on + strand at 1257.171 kb on + strand at 1257.202 kb on + strand at 1257.202 kb on + strand at 1257.203 kb on - strand at 1257.203 kb on - strand at 1257.213 kb on + strand at 1257.682 kb on + strand, within A4249_RS06180 at 1257.721 kb on + strand, within A4249_RS06180 at 1257.721 kb on + strand, within A4249_RS06180 at 1257.722 kb on - strand, within A4249_RS06180 at 1257.722 kb on - strand, within A4249_RS06180 at 1257.913 kb on + strand, within A4249_RS06180 at 1257.913 kb on + strand, within A4249_RS06180 at 1257.913 kb on + strand, within A4249_RS06180 at 1257.913 kb on + strand, within A4249_RS06180 at 1257.914 kb on - strand, within A4249_RS06180 at 1257.914 kb on - strand, within A4249_RS06180 at 1257.914 kb on - strand, within A4249_RS06180 at 1257.914 kb on - strand, within A4249_RS06180 at 1257.914 kb on - strand, within A4249_RS06180 at 1257.914 kb on - strand, within A4249_RS06180 at 1257.914 kb on - strand, within A4249_RS06180 at 1257.914 kb on - strand, within A4249_RS06180 at 1257.982 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,256,409 + +0.0 1,257,171 + -0.0 1,257,171 + +0.2 1,257,202 + -0.9 1,257,202 + +0.5 1,257,203 - +0.2 1,257,203 - -0.7 1,257,213 + -0.2 1,257,682 + A4249_RS06180 0.56 -1.2 1,257,721 + A4249_RS06180 0.61 -0.1 1,257,721 + A4249_RS06180 0.61 -0.5 1,257,722 - A4249_RS06180 0.62 -1.7 1,257,722 - A4249_RS06180 0.62 -0.9 1,257,913 + A4249_RS06180 0.89 +0.4 1,257,913 + A4249_RS06180 0.89 +0.1 1,257,913 + A4249_RS06180 0.89 -0.0 1,257,913 + A4249_RS06180 0.89 +1.1 1,257,914 - A4249_RS06180 0.89 -0.7 1,257,914 - A4249_RS06180 0.89 +0.3 1,257,914 - A4249_RS06180 0.89 -0.6 1,257,914 - A4249_RS06180 0.89 +0.3 1,257,914 - A4249_RS06180 0.89 -1.0 1,257,914 - A4249_RS06180 0.89 +0.5 1,257,914 - A4249_RS06180 0.89 -0.9 1,257,914 - A4249_RS06180 0.89 +0.2 1,257,982 + -0.2
Or see this region's nucleotide sequence