Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06155

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06150 and A4249_RS06155 overlap by 4 nucleotidesA4249_RS06155 and A4249_RS06160 overlap by 4 nucleotidesA4249_RS06160 and A4249_RS06165 are separated by 88 nucleotidesA4249_RS06165 and A4249_RS06170 are separated by 2 nucleotides A4249_RS06150: A4249_RS06150 - peptidylprolyl isomerase, at 1,251,042 to 1,252,949 _RS06150 A4249_RS06155: A4249_RS06155 - anthranilate synthase component I, at 1,252,946 to 1,254,463 _RS06155 A4249_RS06160: A4249_RS06160 - peptidoglycan-binding protein, at 1,254,460 to 1,254,663 _RS06160 A4249_RS06165: A4249_RS06165 - aminodeoxychorismate/anthranilate synthase component II, at 1,254,752 to 1,255,342 _RS06165 A4249_RS06170: A4249_RS06170 - anthranilate phosphoribosyltransferase, at 1,255,345 to 1,256,382 _RS06170 Position (kb) 1252 1253 1254 1255Strain fitness (log2 ratio) -2 -1 0 1 2at 1253.066 kb on + strandat 1253.067 kb on - strandat 1253.094 kb on - strandat 1253.094 kb on - strandat 1253.094 kb on - strandat 1253.141 kb on + strand, within A4249_RS06155at 1253.142 kb on - strand, within A4249_RS06155at 1253.142 kb on - strand, within A4249_RS06155at 1253.678 kb on + strand, within A4249_RS06155at 1253.678 kb on + strand, within A4249_RS06155at 1253.678 kb on + strand, within A4249_RS06155at 1253.679 kb on - strand, within A4249_RS06155at 1253.679 kb on - strand, within A4249_RS06155at 1253.679 kb on - strand, within A4249_RS06155at 1253.679 kb on - strand, within A4249_RS06155at 1253.679 kb on - strand, within A4249_RS06155at 1253.759 kb on + strand, within A4249_RS06155at 1253.759 kb on + strand, within A4249_RS06155at 1253.760 kb on - strand, within A4249_RS06155at 1253.760 kb on - strand, within A4249_RS06155at 1253.760 kb on - strand, within A4249_RS06155at 1253.793 kb on - strand, within A4249_RS06155at 1253.793 kb on - strand, within A4249_RS06155at 1253.801 kb on + strand, within A4249_RS06155at 1253.801 kb on + strand, within A4249_RS06155at 1254.071 kb on + strand, within A4249_RS06155at 1254.261 kb on - strand, within A4249_RS06155at 1254.262 kb on + strand, within A4249_RS06155at 1254.263 kb on - strand, within A4249_RS06155at 1254.263 kb on - strand, within A4249_RS06155at 1254.263 kb on - strand, within A4249_RS06155at 1254.263 kb on - strand, within A4249_RS06155at 1254.383 kb on + strandat 1254.384 kb on - strandat 1254.384 kb on - strandat 1254.675 kb on + strandat 1254.675 kb on + strandat 1254.676 kb on - strandat 1254.689 kb on + strandat 1254.690 kb on - strandat 1254.702 kb on - strandat 1254.739 kb on + strandat 1254.739 kb on + strandat 1254.739 kb on + strandat 1254.740 kb on - strandat 1254.769 kb on + strandat 1254.773 kb on + strandat 1254.773 kb on + strandat 1254.788 kb on + strandat 1254.789 kb on - strandat 1254.789 kb on - strandat 1254.803 kb on + strandat 1254.978 kb on + strand, within A4249_RS06165at 1254.979 kb on - strand, within A4249_RS06165at 1254.984 kb on + strand, within A4249_RS06165at 1254.984 kb on + strand, within A4249_RS06165at 1254.984 kb on + strand, within A4249_RS06165at 1254.984 kb on + strand, within A4249_RS06165at 1254.984 kb on + strand, within A4249_RS06165at 1254.984 kb on + strand, within A4249_RS06165at 1254.984 kb on + strand, within A4249_RS06165at 1254.985 kb on - strand, within A4249_RS06165at 1254.985 kb on - strand, within A4249_RS06165at 1254.985 kb on - strand, within A4249_RS06165at 1254.985 kb on - strand, within A4249_RS06165at 1254.985 kb on - strand, within A4249_RS06165at 1254.985 kb on - strand, within A4249_RS06165at 1254.985 kb on - strand, within A4249_RS06165at 1254.985 kb on - strand, within A4249_RS06165at 1254.985 kb on - strand, within A4249_RS06165at 1254.985 kb on - strand, within A4249_RS06165at 1255.079 kb on - strand, within A4249_RS06165at 1255.130 kb on + strand, within A4249_RS06165at 1255.130 kb on + strand, within A4249_RS06165at 1255.131 kb on - strand, within A4249_RS06165at 1255.131 kb on - strand, within A4249_RS06165at 1255.226 kb on - strand, within A4249_RS06165at 1255.321 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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1,253,066 + -0.4
1,253,067 - -0.6
1,253,094 - +0.9
1,253,094 - +1.6
1,253,094 - -0.8
1,253,141 + A4249_RS06155 0.13 +0.2
1,253,142 - A4249_RS06155 0.13 +0.2
1,253,142 - A4249_RS06155 0.13 -1.9
1,253,678 + A4249_RS06155 0.48 +1.2
1,253,678 + A4249_RS06155 0.48 -0.5
1,253,678 + A4249_RS06155 0.48 -0.7
1,253,679 - A4249_RS06155 0.48 -0.1
1,253,679 - A4249_RS06155 0.48 -0.0
1,253,679 - A4249_RS06155 0.48 -2.1
1,253,679 - A4249_RS06155 0.48 -1.0
1,253,679 - A4249_RS06155 0.48 +0.2
1,253,759 + A4249_RS06155 0.54 -1.1
1,253,759 + A4249_RS06155 0.54 -1.0
1,253,760 - A4249_RS06155 0.54 +0.2
1,253,760 - A4249_RS06155 0.54 +0.3
1,253,760 - A4249_RS06155 0.54 +0.2
1,253,793 - A4249_RS06155 0.56 +1.8
1,253,793 - A4249_RS06155 0.56 -1.0
1,253,801 + A4249_RS06155 0.56 -0.0
1,253,801 + A4249_RS06155 0.56 -0.1
1,254,071 + A4249_RS06155 0.74 -1.0
1,254,261 - A4249_RS06155 0.87 +2.1
1,254,262 + A4249_RS06155 0.87 +0.4
1,254,263 - A4249_RS06155 0.87 +0.4
1,254,263 - A4249_RS06155 0.87 +0.4
1,254,263 - A4249_RS06155 0.87 -0.6
1,254,263 - A4249_RS06155 0.87 -0.1
1,254,383 + -0.6
1,254,384 - -0.7
1,254,384 - -0.2
1,254,675 + +0.8
1,254,675 + +0.2
1,254,676 - +0.5
1,254,689 + +0.2
1,254,690 - -0.7
1,254,702 - -0.3
1,254,739 + +1.1
1,254,739 + +1.1
1,254,739 + +0.2
1,254,740 - -1.6
1,254,769 + +0.3
1,254,773 + +0.4
1,254,773 + +0.8
1,254,788 + +0.9
1,254,789 - -1.0
1,254,789 - -0.0
1,254,803 + -0.5
1,254,978 + A4249_RS06165 0.38 +0.2
1,254,979 - A4249_RS06165 0.38 -0.5
1,254,984 + A4249_RS06165 0.39 -1.2
1,254,984 + A4249_RS06165 0.39 -1.2
1,254,984 + A4249_RS06165 0.39 +0.3
1,254,984 + A4249_RS06165 0.39 +0.4
1,254,984 + A4249_RS06165 0.39 +0.8
1,254,984 + A4249_RS06165 0.39 -0.3
1,254,984 + A4249_RS06165 0.39 -0.8
1,254,985 - A4249_RS06165 0.39 -1.0
1,254,985 - A4249_RS06165 0.39 +2.0
1,254,985 - A4249_RS06165 0.39 -1.0
1,254,985 - A4249_RS06165 0.39 -0.2
1,254,985 - A4249_RS06165 0.39 +1.5
1,254,985 - A4249_RS06165 0.39 +0.1
1,254,985 - A4249_RS06165 0.39 -0.7
1,254,985 - A4249_RS06165 0.39 -0.2
1,254,985 - A4249_RS06165 0.39 -0.7
1,254,985 - A4249_RS06165 0.39 -0.2
1,255,079 - A4249_RS06165 0.55 +1.3
1,255,130 + A4249_RS06165 0.64 -1.8
1,255,130 + A4249_RS06165 0.64 +0.3
1,255,131 - A4249_RS06165 0.64 +0.4
1,255,131 - A4249_RS06165 0.64 +0.9
1,255,226 - A4249_RS06165 0.80 +0.4
1,255,321 - +1.0

Or see this region's nucleotide sequence