Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06150

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06140 and A4249_RS06145 are separated by 64 nucleotidesA4249_RS06145 and A4249_RS06150 are separated by 140 nucleotidesA4249_RS06150 and A4249_RS06155 overlap by 4 nucleotides A4249_RS06140: A4249_RS06140 - preprotein translocase subunit SecG, at 1,249,653 to 1,250,084 _RS06140 A4249_RS06145: A4249_RS06145 - triose-phosphate isomerase, at 1,250,149 to 1,250,901 _RS06145 A4249_RS06150: A4249_RS06150 - peptidylprolyl isomerase, at 1,251,042 to 1,252,949 _RS06150 A4249_RS06155: A4249_RS06155 - anthranilate synthase component I, at 1,252,946 to 1,254,463 _RS06155 Position (kb) 1251 1252 1253Strain fitness (log2 ratio) -2 -1 0 1 2at 1250.122 kb on - strandat 1250.913 kb on + strandat 1250.913 kb on + strandat 1250.914 kb on - strandat 1250.914 kb on - strandat 1250.996 kb on + strandat 1250.996 kb on + strandat 1250.996 kb on + strandat 1250.996 kb on + strandat 1250.998 kb on + strandat 1250.998 kb on + strandat 1250.998 kb on + strandat 1250.998 kb on + strandat 1250.998 kb on + strandat 1251.018 kb on + strandat 1253.066 kb on + strandat 1253.067 kb on - strandat 1253.094 kb on - strandat 1253.094 kb on - strandat 1253.094 kb on - strandat 1253.141 kb on + strand, within A4249_RS06155at 1253.142 kb on - strand, within A4249_RS06155at 1253.142 kb on - strand, within A4249_RS06155at 1253.678 kb on + strand, within A4249_RS06155at 1253.678 kb on + strand, within A4249_RS06155at 1253.678 kb on + strand, within A4249_RS06155at 1253.679 kb on - strand, within A4249_RS06155at 1253.679 kb on - strand, within A4249_RS06155at 1253.679 kb on - strand, within A4249_RS06155at 1253.679 kb on - strand, within A4249_RS06155at 1253.679 kb on - strand, within A4249_RS06155at 1253.759 kb on + strand, within A4249_RS06155at 1253.759 kb on + strand, within A4249_RS06155at 1253.760 kb on - strand, within A4249_RS06155at 1253.760 kb on - strand, within A4249_RS06155at 1253.760 kb on - strand, within A4249_RS06155at 1253.793 kb on - strand, within A4249_RS06155at 1253.793 kb on - strand, within A4249_RS06155at 1253.801 kb on + strand, within A4249_RS06155at 1253.801 kb on + strand, within A4249_RS06155

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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1,250,122 - +1.8
1,250,913 + -0.1
1,250,913 + -0.4
1,250,914 - -0.0
1,250,914 - +0.2
1,250,996 + -0.6
1,250,996 + -0.5
1,250,996 + -0.8
1,250,996 + +0.5
1,250,998 + +0.4
1,250,998 + -0.9
1,250,998 + +0.3
1,250,998 + +0.2
1,250,998 + +0.5
1,251,018 + -1.2
1,253,066 + -0.4
1,253,067 - -0.6
1,253,094 - +0.9
1,253,094 - +1.6
1,253,094 - -0.8
1,253,141 + A4249_RS06155 0.13 +0.2
1,253,142 - A4249_RS06155 0.13 +0.2
1,253,142 - A4249_RS06155 0.13 -1.9
1,253,678 + A4249_RS06155 0.48 +1.2
1,253,678 + A4249_RS06155 0.48 -0.5
1,253,678 + A4249_RS06155 0.48 -0.7
1,253,679 - A4249_RS06155 0.48 -0.1
1,253,679 - A4249_RS06155 0.48 -0.0
1,253,679 - A4249_RS06155 0.48 -2.1
1,253,679 - A4249_RS06155 0.48 -1.0
1,253,679 - A4249_RS06155 0.48 +0.2
1,253,759 + A4249_RS06155 0.54 -1.1
1,253,759 + A4249_RS06155 0.54 -1.0
1,253,760 - A4249_RS06155 0.54 +0.2
1,253,760 - A4249_RS06155 0.54 +0.3
1,253,760 - A4249_RS06155 0.54 +0.2
1,253,793 - A4249_RS06155 0.56 +1.8
1,253,793 - A4249_RS06155 0.56 -1.0
1,253,801 + A4249_RS06155 0.56 -0.0
1,253,801 + A4249_RS06155 0.56 -0.1

Or see this region's nucleotide sequence