Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS05995 and A4249_RS06000 are separated by 177 nucleotides A4249_RS06000 and A4249_RS06005 are separated by 42 nucleotides A4249_RS06005 and A4249_RS06010 overlap by 1 nucleotides A4249_RS06010 and A4249_RS06015 overlap by 4 nucleotides A4249_RS06015 and A4249_RS06020 overlap by 4 nucleotides
A4249_RS05995: A4249_RS05995 - sodium-translocating pyrophosphatase, at 1,221,033 to 1,223,180
_RS05995
A4249_RS06000: A4249_RS06000 - hypothetical protein, at 1,223,358 to 1,223,789
_RS06000
A4249_RS06005: A4249_RS06005 - thiamine-phosphate kinase, at 1,223,832 to 1,224,821
_RS06005
A4249_RS06010: A4249_RS06010 - transcription antitermination factor NusB, at 1,224,821 to 1,225,345
_RS06010
A4249_RS06015: A4249_RS06015 - 6,7-dimethyl-8-ribityllumazine synthase, at 1,225,342 to 1,225,803
_RS06015
A4249_RS06020: A4249_RS06020 - 3,4-dihydroxy-2-butanone-4-phosphate synthase, at 1,225,800 to 1,226,933
_RS06020
Position (kb)
1223
1224
1225 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1222.920 kb on + strand, within A4249_RS05995 at 1222.920 kb on + strand, within A4249_RS05995 at 1222.921 kb on - strand, within A4249_RS05995 at 1222.921 kb on - strand, within A4249_RS05995 at 1222.921 kb on - strand, within A4249_RS05995 at 1222.921 kb on - strand, within A4249_RS05995 at 1222.921 kb on - strand, within A4249_RS05995 at 1222.954 kb on + strand, within A4249_RS05995 at 1222.955 kb on - strand, within A4249_RS05995 at 1222.955 kb on - strand, within A4249_RS05995 at 1222.955 kb on - strand, within A4249_RS05995 at 1222.972 kb on + strand at 1222.973 kb on - strand at 1222.973 kb on - strand at 1223.017 kb on + strand at 1223.017 kb on + strand at 1223.017 kb on + strand at 1223.017 kb on + strand at 1223.018 kb on - strand at 1223.018 kb on - strand at 1223.128 kb on + strand at 1223.128 kb on + strand at 1223.128 kb on + strand at 1223.129 kb on - strand at 1223.129 kb on - strand at 1223.165 kb on + strand at 1223.165 kb on + strand at 1223.165 kb on + strand at 1223.165 kb on + strand at 1223.165 kb on + strand at 1223.165 kb on + strand at 1223.165 kb on + strand at 1223.165 kb on + strand at 1223.165 kb on + strand at 1223.165 kb on + strand at 1223.165 kb on + strand at 1223.165 kb on + strand at 1223.165 kb on + strand at 1223.166 kb on - strand at 1223.166 kb on - strand at 1223.166 kb on - strand at 1223.166 kb on - strand at 1223.166 kb on - strand at 1223.166 kb on - strand at 1223.166 kb on - strand at 1223.166 kb on - strand at 1223.166 kb on - strand at 1223.188 kb on + strand at 1223.513 kb on + strand, within A4249_RS06000 at 1223.513 kb on + strand, within A4249_RS06000 at 1223.514 kb on - strand, within A4249_RS06000 at 1223.629 kb on + strand, within A4249_RS06000 at 1223.629 kb on + strand, within A4249_RS06000 at 1223.629 kb on + strand, within A4249_RS06000 at 1223.629 kb on + strand, within A4249_RS06000 at 1223.629 kb on + strand, within A4249_RS06000 at 1223.629 kb on + strand, within A4249_RS06000 at 1223.629 kb on + strand, within A4249_RS06000 at 1223.629 kb on + strand, within A4249_RS06000 at 1223.629 kb on + strand, within A4249_RS06000 at 1223.629 kb on + strand, within A4249_RS06000 at 1223.629 kb on + strand, within A4249_RS06000 at 1223.629 kb on + strand, within A4249_RS06000 at 1223.629 kb on + strand, within A4249_RS06000 at 1223.629 kb on + strand, within A4249_RS06000 at 1223.630 kb on - strand, within A4249_RS06000 at 1223.630 kb on - strand, within A4249_RS06000 at 1223.630 kb on - strand, within A4249_RS06000 at 1223.630 kb on - strand, within A4249_RS06000 at 1223.630 kb on - strand, within A4249_RS06000 at 1223.780 kb on + strand at 1223.780 kb on + strand at 1223.780 kb on + strand at 1223.780 kb on + strand at 1223.780 kb on + strand at 1223.780 kb on + strand at 1223.780 kb on + strand at 1223.780 kb on + strand at 1223.780 kb on + strand at 1223.781 kb on - strand at 1223.781 kb on - strand at 1223.781 kb on - strand at 1223.781 kb on - strand at 1223.781 kb on - strand at 1223.814 kb on + strand at 1223.815 kb on - strand at 1223.815 kb on - strand at 1224.822 kb on + strand at 1224.822 kb on + strand at 1224.822 kb on + strand at 1224.822 kb on + strand at 1224.822 kb on + strand at 1224.822 kb on + strand at 1224.823 kb on - strand at 1224.823 kb on - strand at 1224.823 kb on - strand at 1224.823 kb on - strand at 1224.823 kb on - strand at 1224.823 kb on - strand at 1224.843 kb on - strand at 1224.843 kb on - strand at 1225.810 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,222,920 + A4249_RS05995 0.88 -0.6 1,222,920 + A4249_RS05995 0.88 +1.8 1,222,921 - A4249_RS05995 0.88 +0.3 1,222,921 - A4249_RS05995 0.88 -0.0 1,222,921 - A4249_RS05995 0.88 -0.0 1,222,921 - A4249_RS05995 0.88 +0.5 1,222,921 - A4249_RS05995 0.88 +1.4 1,222,954 + A4249_RS05995 0.89 +0.7 1,222,955 - A4249_RS05995 0.89 -0.2 1,222,955 - A4249_RS05995 0.89 +0.1 1,222,955 - A4249_RS05995 0.89 +0.5 1,222,972 + -0.6 1,222,973 - +0.2 1,222,973 - +0.1 1,223,017 + +0.4 1,223,017 + -0.9 1,223,017 + -0.1 1,223,017 + -0.7 1,223,018 - -0.0 1,223,018 - -0.7 1,223,128 + -0.6 1,223,128 + +0.4 1,223,128 + +0.2 1,223,129 - +0.9 1,223,129 - +1.4 1,223,165 + +0.5 1,223,165 + -1.0 1,223,165 + +0.1 1,223,165 + -0.1 1,223,165 + -0.9 1,223,165 + +0.0 1,223,165 + +0.6 1,223,165 + -0.2 1,223,165 + -0.3 1,223,165 + -0.2 1,223,165 + +0.5 1,223,165 + +0.2 1,223,165 + -0.9 1,223,166 - -0.3 1,223,166 - +0.1 1,223,166 - -0.2 1,223,166 - +0.5 1,223,166 - -1.9 1,223,166 - +0.4 1,223,166 - +0.4 1,223,166 - -0.1 1,223,166 - -0.3 1,223,188 + +0.4 1,223,513 + A4249_RS06000 0.36 -0.3 1,223,513 + A4249_RS06000 0.36 -0.1 1,223,514 - A4249_RS06000 0.36 -1.3 1,223,629 + A4249_RS06000 0.63 -0.2 1,223,629 + A4249_RS06000 0.63 -1.2 1,223,629 + A4249_RS06000 0.63 -0.1 1,223,629 + A4249_RS06000 0.63 +0.0 1,223,629 + A4249_RS06000 0.63 +0.6 1,223,629 + A4249_RS06000 0.63 -0.0 1,223,629 + A4249_RS06000 0.63 -0.5 1,223,629 + A4249_RS06000 0.63 -0.4 1,223,629 + A4249_RS06000 0.63 -1.1 1,223,629 + A4249_RS06000 0.63 +0.3 1,223,629 + A4249_RS06000 0.63 +0.2 1,223,629 + A4249_RS06000 0.63 -0.3 1,223,629 + A4249_RS06000 0.63 -1.0 1,223,629 + A4249_RS06000 0.63 -0.1 1,223,630 - A4249_RS06000 0.63 -0.2 1,223,630 - A4249_RS06000 0.63 -0.4 1,223,630 - A4249_RS06000 0.63 +0.2 1,223,630 - A4249_RS06000 0.63 -0.6 1,223,630 - A4249_RS06000 0.63 -0.3 1,223,780 + +0.0 1,223,780 + +0.5 1,223,780 + +0.2 1,223,780 + -0.0 1,223,780 + -0.1 1,223,780 + +0.8 1,223,780 + +1.4 1,223,780 + +0.2 1,223,780 + -0.3 1,223,781 - -0.1 1,223,781 - -0.6 1,223,781 - +0.3 1,223,781 - +0.5 1,223,781 - -0.4 1,223,814 + +0.2 1,223,815 - -0.6 1,223,815 - +1.3 1,224,822 + -1.5 1,224,822 + -0.1 1,224,822 + -0.6 1,224,822 + +0.2 1,224,822 + -0.0 1,224,822 + +0.7 1,224,823 - +0.4 1,224,823 - +0.7 1,224,823 - +0.3 1,224,823 - +0.4 1,224,823 - -0.6 1,224,823 - -0.3 1,224,843 - -0.2 1,224,843 - -0.0 1,225,810 - +0.3
Or see this region's nucleotide sequence